EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000011012 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 519 bases
Position: chrscaffold_245546:6049-6567
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000008927	AD	PF09793.9	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000011007	-	519	-	ENSETEP00000008927	172 (aa)	-	UPI0000E40909

Gene Model

Click here to download ENSETEG00000011012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000011012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000011012	-	100	87.429	ENSETEG00000008374	LSM12	90	87.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000011012	-	100	88.000	ENSG00000161654	LSM12	90	88.000	Homo_sapiens
ENSETEG00000011012	-	99	76.879	ENSAPOG00000007907	lsm12b	88	76.879	Acanthochromis_polyacanthus
ENSETEG00000011012	-	100	85.955	ENSAMEG00000018321	LSM12	90	85.955	Ailuropoda_melanoleuca
ENSETEG00000011012	-	99	75.145	ENSACIG00000008538	lsm12b	88	75.145	Amphilophus_citrinellus
ENSETEG00000011012	-	99	76.301	ENSAOCG00000021847	lsm12b	77	76.301	Amphiprion_ocellaris
ENSETEG00000011012	-	99	76.301	ENSAPEG00000002252	lsm12b	88	76.301	Amphiprion_percula
ENSETEG00000011012	-	99	75.723	ENSATEG00000005705	lsm12b	88	75.723	Anabas_testudineus
ENSETEG00000011012	-	100	82.286	ENSACAG00000004618	LSM12	90	82.286	Anolis_carolinensis
ENSETEG00000011012	-	100	88.000	ENSANAG00000029011	LSM12	90	88.000	Aotus_nancymaae
ENSETEG00000011012	-	99	75.723	ENSACLG00000026332	lsm12b	88	75.723	Astatotilapia_calliptera
ENSETEG00000011012	-	99	69.942	ENSAMXG00000036117	lsm12a	80	69.942	Astyanax_mexicanus
ENSETEG00000011012	-	99	75.723	ENSAMXG00000032952	lsm12b	88	75.723	Astyanax_mexicanus
ENSETEG00000011012	-	100	88.000	ENSBTAG00000016252	LSM12	90	88.000	Bos_taurus
ENSETEG00000011012	-	100	88.000	ENSCJAG00000048480	LSM12	90	88.000	Callithrix_jacchus
ENSETEG00000011012	-	100	88.000	ENSCAFG00000014379	LSM12	82	88.000	Canis_familiaris
ENSETEG00000011012	-	100	88.000	ENSCAFG00020012173	LSM12	90	88.000	Canis_lupus_dingo
ENSETEG00000011012	-	100	88.000	ENSCHIG00000018175	LSM12	90	88.000	Capra_hircus
ENSETEG00000011012	-	100	88.000	ENSTSYG00000036361	LSM12	90	88.000	Carlito_syrichta
ENSETEG00000011012	-	92	83.333	ENSCAPG00000009647	LSM12	89	83.333	Cavia_aperea
ENSETEG00000011012	-	100	85.714	ENSCPOG00000012860	LSM12	90	85.714	Cavia_porcellus
ENSETEG00000011012	-	100	88.000	ENSCCAG00000032905	LSM12	90	88.000	Cebus_capucinus
ENSETEG00000011012	-	100	88.000	ENSCATG00000030577	-	90	88.000	Cercocebus_atys
ENSETEG00000011012	-	100	86.857	ENSCLAG00000015759	LSM12	90	86.857	Chinchilla_lanigera
ENSETEG00000011012	-	100	87.429	ENSCSAG00000003486	LSM12	90	87.429	Chlorocebus_sabaeus
ENSETEG00000011012	-	62	88.073	ENSCHOG00000001198	LSM12	100	88.073	Choloepus_hoffmanni
ENSETEG00000011012	-	100	81.143	ENSCPBG00000027105	LSM12	90	81.143	Chrysemys_picta_bellii
ENSETEG00000011012	-	100	88.000	ENSCANG00000043328	LSM12	90	88.000	Colobus_angolensis_palliatus
ENSETEG00000011012	-	100	88.000	ENSCGRG00001002094	Lsm12	90	88.000	Cricetulus_griseus_chok1gshd
ENSETEG00000011012	-	88	88.312	ENSCGRG00000004316	Lsm12	87	88.312	Cricetulus_griseus_crigri
ENSETEG00000011012	-	99	75.145	ENSCSEG00000008434	lsm12b	88	75.145	Cynoglossus_semilaevis
ENSETEG00000011012	-	99	76.301	ENSCVAG00000008755	lsm12b	88	76.301	Cyprinodon_variegatus
ENSETEG00000011012	-	99	75.723	ENSDARG00000109510	lsm12b	88	75.723	Danio_rerio
ENSETEG00000011012	-	99	68.208	ENSDARG00000028848	lsm12a	88	68.208	Danio_rerio
ENSETEG00000011012	-	100	87.429	ENSDNOG00000002418	LSM12	82	87.429	Dasypus_novemcinctus
ENSETEG00000011012	-	100	88.000	ENSDORG00000016381	Lsm12	90	88.000	Dipodomys_ordii
ENSETEG00000011012	-	73	34.109	FBgn0030364	Lsm12	59	34.109	Drosophila_melanogaster
ENSETEG00000011012	-	73	30.714	FBgn0036057	CG14164	74	30.714	Drosophila_melanogaster
ENSETEG00000011012	-	82	58.333	ENSEBUG00000016299	lsm12a	80	58.333	Eptatretus_burgeri
ENSETEG00000011012	-	100	88.000	ENSEASG00005010155	LSM12	90	88.000	Equus_asinus_asinus
ENSETEG00000011012	-	100	88.000	ENSECAG00000009071	LSM12	90	88.000	Equus_caballus
ENSETEG00000011012	-	87	86.928	ENSEEUG00000002419	-	100	86.928	Erinaceus_europaeus
ENSETEG00000011012	-	99	74.566	ENSELUG00000015538	lsm12b	88	69.942	Esox_lucius
ENSETEG00000011012	-	99	72.254	ENSELUG00000000256	-	88	72.254	Esox_lucius
ENSETEG00000011012	-	100	88.000	ENSFCAG00000037021	LSM12	90	88.000	Felis_catus
ENSETEG00000011012	-	84	87.755	ENSFDAG00000008954	LSM12	86	87.755	Fukomys_damarensis
ENSETEG00000011012	-	99	75.145	ENSFHEG00000019913	lsm12b	88	75.145	Fundulus_heteroclitus
ENSETEG00000011012	-	90	74.684	ENSGMOG00000015449	lsm12b	100	74.684	Gadus_morhua
ENSETEG00000011012	-	87	82.353	ENSGALG00000039803	LSM12	100	82.353	Gallus_gallus
ENSETEG00000011012	-	99	75.723	ENSGAFG00000011829	lsm12b	88	75.723	Gambusia_affinis
ENSETEG00000011012	-	90	75.316	ENSGACG00000003428	lsm12b	100	75.316	Gasterosteus_aculeatus
ENSETEG00000011012	-	100	82.286	ENSGAGG00000021965	LSM12	90	82.286	Gopherus_agassizii
ENSETEG00000011012	-	100	88.000	ENSGGOG00000010589	-	90	88.000	Gorilla_gorilla
ENSETEG00000011012	-	88	74.675	ENSHBUG00000007667	lsm12b	68	74.675	Haplochromis_burtoni
ENSETEG00000011012	-	100	88.000	ENSHGLG00000011411	LSM12	90	88.000	Heterocephalus_glaber_female
ENSETEG00000011012	-	88	87.662	ENSHGLG00100000241	LSM12	82	87.662	Heterocephalus_glaber_male
ENSETEG00000011012	-	99	75.287	ENSHCOG00000002094	lsm12b	89	75.287	Hippocampus_comes
ENSETEG00000011012	-	98	65.497	ENSIPUG00000008936	lsm12a	87	65.497	Ictalurus_punctatus
ENSETEG00000011012	-	99	75.723	ENSIPUG00000014800	lsm12	88	75.723	Ictalurus_punctatus
ENSETEG00000011012	-	100	88.000	ENSSTOG00000007403	LSM12	90	88.000	Ictidomys_tridecemlineatus
ENSETEG00000011012	-	100	86.857	ENSJJAG00000004364	-	90	86.857	Jaculus_jaculus
ENSETEG00000011012	-	83	76.712	ENSJJAG00000014652	-	87	76.712	Jaculus_jaculus
ENSETEG00000011012	-	100	78.286	ENSJJAG00000011793	-	92	78.286	Jaculus_jaculus
ENSETEG00000011012	-	99	76.301	ENSLBEG00000027999	lsm12b	88	76.301	Labrus_bergylta
ENSETEG00000011012	-	99	80.347	ENSLACG00000015981	LSM12	89	80.347	Latimeria_chalumnae
ENSETEG00000011012	-	99	75.145	ENSLOCG00000013079	lsm12b	88	75.145	Lepisosteus_oculatus
ENSETEG00000011012	-	100	88.000	ENSLAFG00000005202	LSM12	90	88.000	Loxodonta_africana
ENSETEG00000011012	-	100	88.000	ENSMFAG00000031376	LSM12	90	88.000	Macaca_fascicularis
ENSETEG00000011012	-	100	88.000	ENSMMUG00000006804	LSM12	90	88.000	Macaca_mulatta
ENSETEG00000011012	-	100	88.000	ENSMNEG00000030594	-	90	88.000	Macaca_nemestrina
ENSETEG00000011012	-	100	88.000	ENSMLEG00000039934	LSM12	90	88.000	Mandrillus_leucophaeus
ENSETEG00000011012	-	99	76.301	ENSMAMG00000004279	lsm12b	88	76.301	Mastacembelus_armatus
ENSETEG00000011012	-	99	75.723	ENSMZEG00005005754	lsm12b	88	75.723	Maylandia_zebra
ENSETEG00000011012	-	100	87.429	ENSMICG00000037219	LSM12	90	87.429	Microcebus_murinus
ENSETEG00000011012	-	100	74.857	ENSMOCG00000017015	-	77	74.857	Microtus_ochrogaster
ENSETEG00000011012	-	100	88.000	ENSMOCG00000019878	-	90	88.000	Microtus_ochrogaster
ENSETEG00000011012	-	99	75.723	ENSMMOG00000020848	lsm12b	88	75.723	Mola_mola
ENSETEG00000011012	-	99	76.301	ENSMALG00000007578	lsm12b	88	76.301	Monopterus_albus
ENSETEG00000011012	-	100	87.429	MGP_CAROLIEiJ_G0017241	Lsm12	90	87.429	Mus_caroli
ENSETEG00000011012	-	100	88.000	ENSMUSG00000020922	Lsm12	90	88.000	Mus_musculus
ENSETEG00000011012	-	100	80.208	MGP_PahariEiJ_G0018371	Lsm12	91	80.208	Mus_pahari
ENSETEG00000011012	-	100	87.429	MGP_SPRETEiJ_G0018084	Lsm12	90	87.429	Mus_spretus
ENSETEG00000011012	-	100	88.571	ENSMLUG00000006391	LSM12	90	88.571	Myotis_lucifugus
ENSETEG00000011012	-	100	88.000	ENSNGAG00000001870	Lsm12	90	88.000	Nannospalax_galili
ENSETEG00000011012	-	98	65.169	ENSNGAG00000015429	-	91	65.169	Nannospalax_galili
ENSETEG00000011012	-	99	75.723	ENSNBRG00000006266	lsm12b	88	75.723	Neolamprologus_brichardi
ENSETEG00000011012	-	100	88.000	ENSNLEG00000005580	-	90	88.000	Nomascus_leucogenys
ENSETEG00000011012	-	83	84.828	ENSMEUG00000007501	-	88	84.828	Notamacropus_eugenii
ENSETEG00000011012	-	100	88.000	ENSOPRG00000008552	LSM12	90	88.000	Ochotona_princeps
ENSETEG00000011012	-	99	80.925	ENSODEG00000007886	-	67	80.925	Octodon_degus
ENSETEG00000011012	-	100	86.857	ENSODEG00000017998	-	90	86.857	Octodon_degus
ENSETEG00000011012	-	99	75.723	ENSONIG00000007933	lsm12b	88	75.723	Oreochromis_niloticus
ENSETEG00000011012	-	100	85.955	ENSOCUG00000008566	-	90	85.955	Oryctolagus_cuniculus
ENSETEG00000011012	-	99	83.333	ENSOCUG00000027889	-	90	83.333	Oryctolagus_cuniculus
ENSETEG00000011012	-	99	82.184	ENSOCUG00000024823	-	90	82.184	Oryctolagus_cuniculus
ENSETEG00000011012	-	99	84.483	ENSOCUG00000021254	-	90	84.483	Oryctolagus_cuniculus
ENSETEG00000011012	-	99	75.723	ENSORLG00000011310	lsm12b	88	75.723	Oryzias_latipes
ENSETEG00000011012	-	99	75.723	ENSORLG00020002060	lsm12b	81	75.723	Oryzias_latipes_hni
ENSETEG00000011012	-	99	75.723	ENSORLG00015001647	lsm12b	81	75.723	Oryzias_latipes_hsok
ENSETEG00000011012	-	99	75.723	ENSOMEG00000006184	lsm12b	81	75.723	Oryzias_melastigma
ENSETEG00000011012	-	100	87.429	ENSOGAG00000010489	LSM12	90	87.429	Otolemur_garnettii
ENSETEG00000011012	-	100	84.530	ENSOARG00000006589	LSM12	90	84.530	Ovis_aries
ENSETEG00000011012	-	87	88.235	ENSPPAG00000034974	-	83	88.235	Pan_paniscus
ENSETEG00000011012	-	100	88.000	ENSPPRG00000023420	LSM12	90	88.000	Panthera_pardus
ENSETEG00000011012	-	87	88.235	ENSPTIG00000012704	-	82	88.235	Panthera_tigris_altaica
ENSETEG00000011012	-	62	87.156	ENSPTIG00000014850	-	80	87.156	Panthera_tigris_altaica
ENSETEG00000011012	-	100	88.000	ENSPTRG00000009261	LSM12	90	88.000	Pan_troglodytes
ENSETEG00000011012	-	100	88.000	ENSPANG00000021315	-	90	88.000	Papio_anubis
ENSETEG00000011012	-	99	68.208	ENSPKIG00000017932	-	88	68.208	Paramormyrops_kingsleyae
ENSETEG00000011012	-	99	76.879	ENSPKIG00000021058	lsm12b	88	76.879	Paramormyrops_kingsleyae
ENSETEG00000011012	-	99	75.145	ENSPMGG00000021344	lsm12b	88	75.145	Periophthalmus_magnuspinnatus
ENSETEG00000011012	-	100	88.000	ENSPEMG00000012199	Lsm12	90	88.000	Peromyscus_maniculatus_bairdii
ENSETEG00000011012	-	87	60.526	ENSPMAG00000005461	lsm12a	87	60.526	Petromyzon_marinus
ENSETEG00000011012	-	100	84.571	ENSPCIG00000020244	LSM12	90	84.571	Phascolarctos_cinereus
ENSETEG00000011012	-	99	75.723	ENSPFOG00000015930	lsm12b	88	75.723	Poecilia_formosa
ENSETEG00000011012	-	99	75.723	ENSPLAG00000021089	lsm12b	88	75.723	Poecilia_latipinna
ENSETEG00000011012	-	99	75.723	ENSPMEG00000012961	lsm12b	88	75.723	Poecilia_mexicana
ENSETEG00000011012	-	98	76.023	ENSPREG00000010236	lsm12b	95	76.023	Poecilia_reticulata
ENSETEG00000011012	-	100	88.000	ENSPPYG00000008344	LSM12	90	88.000	Pongo_abelii
ENSETEG00000011012	-	83	86.897	ENSPCAG00000008790	LSM12	91	86.897	Procavia_capensis
ENSETEG00000011012	-	100	88.000	ENSPCOG00000027951	LSM12	90	88.000	Propithecus_coquereli
ENSETEG00000011012	-	100	87.429	ENSPVAG00000013706	LSM12	90	87.429	Pteropus_vampyrus
ENSETEG00000011012	-	99	75.723	ENSPNYG00000003386	lsm12b	88	75.723	Pundamilia_nyererei
ENSETEG00000011012	-	99	73.410	ENSPNAG00000004186	lsm12b	88	73.410	Pygocentrus_nattereri
ENSETEG00000011012	-	99	69.364	ENSPNAG00000018435	lsm12a	88	69.364	Pygocentrus_nattereri
ENSETEG00000011012	-	100	88.000	ENSRNOG00000020894	Lsm12	90	88.000	Rattus_norvegicus
ENSETEG00000011012	-	100	88.000	ENSRBIG00000027910	LSM12	90	88.000	Rhinopithecus_bieti
ENSETEG00000011012	-	100	88.000	ENSRROG00000045530	-	90	88.000	Rhinopithecus_roxellana
ENSETEG00000011012	-	66	77.391	ENSRROG00000000537	-	80	77.391	Rhinopithecus_roxellana
ENSETEG00000011012	-	81	30.128	YHR121W	-	80	30.128	Saccharomyces_cerevisiae
ENSETEG00000011012	-	100	88.000	ENSSBOG00000025310	LSM12	90	88.000	Saimiri_boliviensis_boliviensis
ENSETEG00000011012	-	90	82.911	ENSSHAG00000014914	LSM12	100	82.911	Sarcophilus_harrisii
ENSETEG00000011012	-	99	74.566	ENSSFOG00015020392	lsm12a	88	74.566	Scleropages_formosus
ENSETEG00000011012	-	99	76.301	ENSSFOG00015009612	lsm12	88	76.301	Scleropages_formosus
ENSETEG00000011012	-	99	76.301	ENSSMAG00000008089	lsm12b	88	76.301	Scophthalmus_maximus
ENSETEG00000011012	-	99	76.879	ENSSDUG00000012711	lsm12b	88	76.879	Seriola_dumerili
ENSETEG00000011012	-	99	76.879	ENSSLDG00000007404	lsm12b	88	76.879	Seriola_lalandi_dorsalis
ENSETEG00000011012	-	87	87.582	ENSSARG00000005537	LSM12	100	87.582	Sorex_araneus
ENSETEG00000011012	-	100	82.857	ENSSPUG00000011984	LSM12	90	82.857	Sphenodon_punctatus
ENSETEG00000011012	-	99	76.301	ENSSPAG00000017058	lsm12b	88	76.301	Stegastes_partitus
ENSETEG00000011012	-	100	88.000	ENSSSCG00000032394	LSM12	90	88.000	Sus_scrofa
ENSETEG00000011012	-	99	75.145	ENSTRUG00000007121	lsm12b	88	75.145	Takifugu_rubripes
ENSETEG00000011012	-	99	75.145	ENSTNIG00000014436	lsm12b	88	75.145	Tetraodon_nigroviridis
ENSETEG00000011012	-	100	86.286	ENSTBEG00000012392	-	90	86.286	Tupaia_belangeri
ENSETEG00000011012	-	100	87.429	ENSTBEG00000012523	-	90	87.429	Tupaia_belangeri
ENSETEG00000011012	-	100	88.000	ENSTTRG00000010433	LSM12	90	88.000	Tursiops_truncatus
ENSETEG00000011012	-	100	88.000	ENSUAMG00000006313	LSM12	98	85.443	Ursus_americanus
ENSETEG00000011012	-	95	82.530	ENSUMAG00000012987	LSM12	93	82.530	Ursus_maritimus
ENSETEG00000011012	-	100	82.286	ENSVPAG00000011145	LSM12	90	82.286	Vicugna_pacos
ENSETEG00000011012	-	100	88.000	ENSVVUG00000017581	LSM12	90	88.000	Vulpes_vulpes
ENSETEG00000011012	-	91	57.500	ENSXETG00000003371	lsm12	77	57.500	Xenopus_tropicalis
ENSETEG00000011012	-	99	75.723	ENSXCOG00000003994	lsm12b	88	75.723	Xiphophorus_couchianus
ENSETEG00000011012	-	99	75.723	ENSXMAG00000020950	lsm12b	88	75.723	Xiphophorus_maculatus