EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000011265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 593 bases
Position: chrGeneScaffold_5084:15762-16354
Accession: 101649050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000009133	zf-U1	PF06220.12	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000011262	-	468	XM_004700006	ENSETEP00000009133	156 (aa)	XP_004700063	UPI0000E4222B

Gene Model

Click here to download ENSETEG00000011265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000011265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000011265	-	53	87.952	ENSETEG00000008756	-	75	87.013
ENSETEG00000011265	-	96	72.727	ENSETEG00000005056	-	97	72.727
ENSETEG00000011265	-	100	89.744	ENSETEG00000008268	-	100	89.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000011265	-	100	92.308	ENSG00000124562	SNRPC	98	92.308	Homo_sapiens
ENSETEG00000011265	-	100	90.385	ENSAMEG00000000963	SNRPC	85	91.558	Ailuropoda_melanoleuca
ENSETEG00000011265	-	100	87.821	ENSACAG00000015721	SNRPC	86	88.961	Anolis_carolinensis
ENSETEG00000011265	-	100	91.667	ENSANAG00000007843	-	98	91.667	Aotus_nancymaae
ENSETEG00000011265	-	100	82.692	ENSANAG00000019726	-	90	82.692	Aotus_nancymaae
ENSETEG00000011265	-	99	83.871	ENSANAG00000020588	-	91	83.871	Aotus_nancymaae
ENSETEG00000011265	-	100	70.513	ENSANAG00000021444	-	98	67.308	Aotus_nancymaae
ENSETEG00000011265	-	100	80.769	ENSANAG00000021026	-	98	73.077	Aotus_nancymaae
ENSETEG00000011265	-	100	92.308	ENSANAG00000019696	-	98	92.308	Aotus_nancymaae
ENSETEG00000011265	-	100	89.103	ENSANAG00000019157	-	98	89.103	Aotus_nancymaae
ENSETEG00000011265	-	100	78.205	ENSAMXG00000032641	snrpc	86	78.205	Astyanax_mexicanus
ENSETEG00000011265	-	100	92.308	ENSBTAG00000024549	SNRPC	98	92.308	Bos_taurus
ENSETEG00000011265	-	100	92.308	ENSCJAG00000015321	-	98	92.308	Callithrix_jacchus
ENSETEG00000011265	-	100	92.308	ENSCJAG00000043055	-	98	92.308	Callithrix_jacchus
ENSETEG00000011265	-	100	90.385	ENSCJAG00000041822	-	98	90.385	Callithrix_jacchus
ENSETEG00000011265	-	100	74.359	ENSCAFG00000025525	-	98	74.359	Canis_familiaris
ENSETEG00000011265	-	62	92.708	ENSCAFG00000001231	-	61	92.208	Canis_familiaris
ENSETEG00000011265	-	100	82.166	ENSCAFG00000028988	-	98	81.529	Canis_familiaris
ENSETEG00000011265	-	100	89.103	ENSCAFG00000031775	-	98	89.103	Canis_familiaris
ENSETEG00000011265	-	100	89.103	ENSCAFG00020017383	-	98	89.103	Canis_lupus_dingo
ENSETEG00000011265	-	99	82.468	ENSCAFG00020009944	-	89	82.468	Canis_lupus_dingo
ENSETEG00000011265	-	100	88.462	ENSCAFG00020005758	-	97	88.961	Canis_lupus_dingo
ENSETEG00000011265	-	100	92.308	ENSCAFG00020005945	-	98	92.308	Canis_lupus_dingo
ENSETEG00000011265	-	100	91.667	ENSCHIG00000012087	-	98	91.667	Capra_hircus
ENSETEG00000011265	-	100	65.385	ENSCHIG00000005039	-	98	66.026	Capra_hircus
ENSETEG00000011265	-	100	92.308	ENSTSYG00000011216	-	98	92.308	Carlito_syrichta
ENSETEG00000011265	-	100	84.615	ENSTSYG00000029745	-	65	89.922	Carlito_syrichta
ENSETEG00000011265	-	100	78.205	ENSTSYG00000025721	-	98	76.923	Carlito_syrichta
ENSETEG00000011265	-	89	92.086	ENSCAPG00000005161	SNRPC	98	92.086	Cavia_aperea
ENSETEG00000011265	-	100	92.308	ENSCPOG00000008563	SNRPC	98	92.308	Cavia_porcellus
ENSETEG00000011265	-	100	87.821	ENSCCAG00000036059	-	87	87.821	Cebus_capucinus
ENSETEG00000011265	-	98	85.621	ENSCCAG00000022751	-	93	85.621	Cebus_capucinus
ENSETEG00000011265	-	100	75.000	ENSCCAG00000026624	-	65	75.000	Cebus_capucinus
ENSETEG00000011265	-	100	66.026	ENSCCAG00000028293	-	98	62.821	Cebus_capucinus
ENSETEG00000011265	-	98	74.510	ENSCCAG00000022209	-	93	73.856	Cebus_capucinus
ENSETEG00000011265	-	100	92.308	ENSCATG00000035787	SNRPC	98	92.308	Cercocebus_atys
ENSETEG00000011265	-	99	76.774	ENSCLAG00000010242	-	95	76.774	Chinchilla_lanigera
ENSETEG00000011265	-	100	92.308	ENSCLAG00000016920	SNRPC	98	92.308	Chinchilla_lanigera
ENSETEG00000011265	-	100	73.718	ENSCHOG00000011439	SNRPC	86	74.675	Choloepus_hoffmanni
ENSETEG00000011265	-	100	90.385	ENSCPBG00000027142	SNRPC	98	90.385	Chrysemys_picta_bellii
ENSETEG00000011265	-	100	92.308	ENSCANG00000028035	SNRPC	98	92.308	Colobus_angolensis_palliatus
ENSETEG00000011265	-	100	80.128	ENSCGRG00001021483	-	98	80.769	Cricetulus_griseus_chok1gshd
ENSETEG00000011265	-	100	91.667	ENSCGRG00001009011	-	98	91.667	Cricetulus_griseus_chok1gshd
ENSETEG00000011265	-	100	89.744	ENSCGRG00000005005	Snrpc	97	90.909	Cricetulus_griseus_crigri
ENSETEG00000011265	-	100	78.205	ENSDARG00000009871	snrpc	98	78.205	Danio_rerio
ENSETEG00000011265	-	62	92.708	ENSDNOG00000042403	-	67	92.208	Dasypus_novemcinctus
ENSETEG00000011265	-	100	91.026	ENSDNOG00000034699	-	98	91.026	Dasypus_novemcinctus
ENSETEG00000011265	-	96	73.826	ENSDORG00000029823	-	99	74.497	Dipodomys_ordii
ENSETEG00000011265	-	54	89.412	ENSDORG00000005955	Snrpc	64	74.026	Dipodomys_ordii
ENSETEG00000011265	-	100	92.308	ENSEASG00005021007	SNRPC	98	92.308	Equus_asinus_asinus
ENSETEG00000011265	-	100	92.308	ENSECAG00000026848	SNRPC	98	92.308	Equus_caballus
ENSETEG00000011265	-	99	72.258	ENSEEUG00000014633	SNRPC	89	72.258	Erinaceus_europaeus
ENSETEG00000011265	-	60	79.787	ENSELUG00000000815	SNRPC	50	88.462	Esox_lucius
ENSETEG00000011265	-	100	92.308	ENSFCAG00000044077	-	98	92.308	Felis_catus
ENSETEG00000011265	-	79	92.683	ENSFCAG00000031775	-	76	92.248	Felis_catus
ENSETEG00000011265	-	100	91.026	ENSFALG00000003756	SNRPC	98	91.026	Ficedula_albicollis
ENSETEG00000011265	-	100	92.308	ENSFDAG00000018111	SNRPC	98	92.308	Fukomys_damarensis
ENSETEG00000011265	-	100	89.172	ENSGALG00000002773	SNRPC	98	89.172	Gallus_gallus
ENSETEG00000011265	-	100	90.385	ENSGAGG00000003063	SNRPC	98	90.385	Gopherus_agassizii
ENSETEG00000011265	-	100	92.308	ENSGGOG00000012499	SNRPC	98	92.308	Gorilla_gorilla
ENSETEG00000011265	-	100	92.308	ENSHGLG00000013981	SNRPC	98	92.308	Heterocephalus_glaber_female
ENSETEG00000011265	-	100	77.564	ENSHGLG00000017741	-	98	71.795	Heterocephalus_glaber_female
ENSETEG00000011265	-	83	71.318	ENSHGLG00000005871	-	98	70.513	Heterocephalus_glaber_female
ENSETEG00000011265	-	100	92.308	ENSHGLG00100009478	SNRPC	98	92.308	Heterocephalus_glaber_male
ENSETEG00000011265	-	100	77.564	ENSHGLG00100010786	-	98	71.795	Heterocephalus_glaber_male
ENSETEG00000011265	-	100	87.179	ENSHGLG00100017764	-	98	87.179	Heterocephalus_glaber_male
ENSETEG00000011265	-	100	78.205	ENSIPUG00000024851	snrpc	98	78.205	Ictalurus_punctatus
ENSETEG00000011265	-	100	92.308	ENSSTOG00000013786	SNRPC	98	92.308	Ictidomys_tridecemlineatus
ENSETEG00000011265	-	100	91.667	ENSJJAG00000021741	Snrpc	98	91.667	Jaculus_jaculus
ENSETEG00000011265	-	76	82.500	ENSLACG00000013753	SNRPC	86	83.871	Latimeria_chalumnae
ENSETEG00000011265	-	100	92.308	ENSLAFG00000013534	SNRPC	98	92.308	Loxodonta_africana
ENSETEG00000011265	-	100	92.949	ENSMFAG00000030525	-	98	92.949	Macaca_fascicularis
ENSETEG00000011265	-	100	92.308	ENSMFAG00000031764	-	98	92.308	Macaca_fascicularis
ENSETEG00000011265	-	100	91.026	ENSMMUG00000039415	-	98	91.026	Macaca_mulatta
ENSETEG00000011265	-	100	85.256	ENSMMUG00000045425	-	98	85.256	Macaca_mulatta
ENSETEG00000011265	-	100	91.026	ENSMMUG00000000869	-	93	92.157	Macaca_mulatta
ENSETEG00000011265	-	100	92.308	ENSMNEG00000032731	SNRPC	98	92.308	Macaca_nemestrina
ENSETEG00000011265	-	100	92.308	ENSMLEG00000033916	-	98	92.308	Mandrillus_leucophaeus
ENSETEG00000011265	-	97	72.185	ENSMLEG00000039724	-	79	70.199	Mandrillus_leucophaeus
ENSETEG00000011265	-	97	86.184	ENSMLEG00000040224	-	87	86.184	Mandrillus_leucophaeus
ENSETEG00000011265	-	100	86.538	ENSMGAG00000006054	SNRPC	98	89.103	Meleagris_gallopavo
ENSETEG00000011265	-	100	88.462	ENSMICG00000007339	-	98	85.897	Microcebus_murinus
ENSETEG00000011265	-	100	91.667	ENSMICG00000032183	-	98	91.667	Microcebus_murinus
ENSETEG00000011265	-	100	75.000	ENSMICG00000036552	-	85	79.739	Microcebus_murinus
ENSETEG00000011265	-	100	91.667	ENSMOCG00000017609	Snrpc	98	91.667	Microtus_ochrogaster
ENSETEG00000011265	-	100	91.026	ENSMODG00000013904	-	98	91.026	Monodelphis_domestica
ENSETEG00000011265	-	100	60.897	ENSMALG00000001197	snrpc	98	60.256	Monopterus_albus
ENSETEG00000011265	-	100	91.667	MGP_CAROLIEiJ_G0021308	Snrpc	98	91.667	Mus_caroli
ENSETEG00000011265	-	100	91.667	ENSMUSG00000024217	Snrpc	98	91.667	Mus_musculus
ENSETEG00000011265	-	62	91.667	MGP_SPRETEiJ_G0022221	-	64	90.909	Mus_spretus
ENSETEG00000011265	-	100	90.385	ENSMPUG00000003210	SNRPC	97	91.558	Mustela_putorius_furo
ENSETEG00000011265	-	100	90.385	ENSMLUG00000002488	SNRPC	97	91.558	Myotis_lucifugus
ENSETEG00000011265	-	100	91.667	ENSNGAG00000019686	Snrpc	98	91.667	Nannospalax_galili
ENSETEG00000011265	-	100	92.308	ENSNLEG00000034810	SNRPC	98	92.308	Nomascus_leucogenys
ENSETEG00000011265	-	89	91.367	ENSMEUG00000009300	SNRPC	98	91.367	Notamacropus_eugenii
ENSETEG00000011265	-	100	92.308	ENSODEG00000020370	-	98	92.308	Octodon_degus
ENSETEG00000011265	-	100	91.667	ENSODEG00000020201	-	98	91.667	Octodon_degus
ENSETEG00000011265	-	100	92.308	ENSODEG00000017080	-	98	92.308	Octodon_degus
ENSETEG00000011265	-	100	92.308	ENSODEG00000018985	-	98	92.308	Octodon_degus
ENSETEG00000011265	-	100	92.308	ENSODEG00000019633	-	98	92.308	Octodon_degus
ENSETEG00000011265	-	79	90.244	ENSODEG00000006008	-	93	90.698	Octodon_degus
ENSETEG00000011265	-	89	88.811	ENSOANG00000003405	SNRPC	98	87.586	Ornithorhynchus_anatinus
ENSETEG00000011265	-	62	90.625	ENSOCUG00000023292	-	98	90.385	Oryctolagus_cuniculus
ENSETEG00000011265	-	100	91.667	ENSOCUG00000026430	-	97	91.667	Oryctolagus_cuniculus
ENSETEG00000011265	-	100	92.308	ENSOCUG00000026668	-	98	92.308	Oryctolagus_cuniculus
ENSETEG00000011265	-	97	92.105	ENSOGAG00000008755	-	87	91.558	Otolemur_garnettii
ENSETEG00000011265	-	100	90.385	ENSOGAG00000026269	-	98	90.385	Otolemur_garnettii
ENSETEG00000011265	-	99	78.571	ENSOGAG00000028405	-	99	77.273	Otolemur_garnettii
ENSETEG00000011265	-	100	92.308	ENSOARG00000010823	SNRPC	98	92.308	Ovis_aries
ENSETEG00000011265	-	100	92.308	ENSPPAG00000043871	SNRPC	98	92.308	Pan_paniscus
ENSETEG00000011265	-	97	54.902	ENSPPRG00000016017	-	86	52.288	Panthera_pardus
ENSETEG00000011265	-	100	92.308	ENSPPRG00000008647	-	98	92.308	Panthera_pardus
ENSETEG00000011265	-	100	59.615	ENSPPRG00000010967	-	87	55.975	Panthera_pardus
ENSETEG00000011265	-	100	92.308	ENSPTIG00000021867	-	98	92.308	Panthera_tigris_altaica
ENSETEG00000011265	-	99	59.355	ENSPTIG00000013329	-	61	76.596	Panthera_tigris_altaica
ENSETEG00000011265	-	100	49.359	ENSPTIG00000011880	-	86	44.872	Panthera_tigris_altaica
ENSETEG00000011265	-	100	92.308	ENSPTRG00000018070	SNRPC	98	92.308	Pan_troglodytes
ENSETEG00000011265	-	100	92.308	ENSPANG00000022802	-	98	92.308	Papio_anubis
ENSETEG00000011265	-	100	83.974	ENSPANG00000018228	-	92	83.974	Papio_anubis
ENSETEG00000011265	-	99	76.923	ENSPKIG00000001671	SNRPC	97	76.923	Paramormyrops_kingsleyae
ENSETEG00000011265	-	60	79.787	ENSPKIG00000003136	snrpc	100	69.032	Paramormyrops_kingsleyae
ENSETEG00000011265	-	99	88.961	ENSPSIG00000004876	SNRPC	75	88.961	Pelodiscus_sinensis
ENSETEG00000011265	-	99	53.896	ENSPMGG00000022162	snrpc	98	58.065	Periophthalmus_magnuspinnatus
ENSETEG00000011265	-	100	80.769	ENSPEMG00000002763	-	98	79.487	Peromyscus_maniculatus_bairdii
ENSETEG00000011265	-	100	91.667	ENSPEMG00000010773	Snrpc	98	91.667	Peromyscus_maniculatus_bairdii
ENSETEG00000011265	-	85	69.173	ENSPMAG00000000602	snrpc	97	58.974	Petromyzon_marinus
ENSETEG00000011265	-	53	92.771	ENSPPYG00000029902	-	78	92.208	Pongo_abelii
ENSETEG00000011265	-	100	90.385	ENSPCAG00000016885	SNRPC	88	91.558	Procavia_capensis
ENSETEG00000011265	-	100	92.308	ENSPCOG00000004904	SNRPC	98	92.308	Propithecus_coquereli
ENSETEG00000011265	-	100	89.744	ENSPVAG00000015597	SNRPC	85	90.909	Pteropus_vampyrus
ENSETEG00000011265	-	60	60.638	ENSPNYG00000004900	snrpc	59	70.270	Pundamilia_nyererei
ENSETEG00000011265	-	100	72.436	ENSPNAG00000012799	snrpc	98	68.153	Pygocentrus_nattereri
ENSETEG00000011265	-	100	91.667	ENSRNOG00000000493	Snrpc	98	91.667	Rattus_norvegicus
ENSETEG00000011265	-	100	91.667	ENSRBIG00000014819	-	98	91.667	Rhinopithecus_bieti
ENSETEG00000011265	-	100	92.308	ENSRBIG00000037567	-	98	92.308	Rhinopithecus_bieti
ENSETEG00000011265	-	100	91.667	ENSRBIG00000022998	-	98	91.667	Rhinopithecus_bieti
ENSETEG00000011265	-	99	85.161	ENSRBIG00000036353	-	79	86.184	Rhinopithecus_bieti
ENSETEG00000011265	-	100	92.308	ENSRROG00000041300	SNRPC	98	92.308	Rhinopithecus_roxellana
ENSETEG00000011265	-	100	92.308	ENSSBOG00000031528	-	98	92.308	Saimiri_boliviensis_boliviensis
ENSETEG00000011265	-	96	78.000	ENSSBOG00000032361	-	93	78.000	Saimiri_boliviensis_boliviensis
ENSETEG00000011265	-	97	77.632	ENSSBOG00000032882	-	91	75.000	Saimiri_boliviensis_boliviensis
ENSETEG00000011265	-	100	78.205	ENSSBOG00000023189	-	91	78.205	Saimiri_boliviensis_boliviensis
ENSETEG00000011265	-	99	90.909	ENSSHAG00000000945	-	86	90.909	Sarcophilus_harrisii
ENSETEG00000011265	-	60	74.468	ENSSFOG00015019150	snrpc	97	74.675	Scleropages_formosus
ENSETEG00000011265	-	59	78.261	ENSSFOG00015022422	snrpc	99	80.769	Scleropages_formosus
ENSETEG00000011265	-	53	90.361	ENSSARG00000008970	SNRPC	87	69.872	Sorex_araneus
ENSETEG00000011265	-	100	90.385	ENSSPUG00000002502	SNRPC	98	90.385	Sphenodon_punctatus
ENSETEG00000011265	-	100	92.308	ENSSSCG00000001531	SNRPC	98	92.308	Sus_scrofa
ENSETEG00000011265	-	100	89.744	ENSTGUG00000001773	SNRPC	97	90.323	Taeniopygia_guttata
ENSETEG00000011265	-	100	67.925	ENSTNIG00000018307	snrpc	98	65.823	Tetraodon_nigroviridis
ENSETEG00000011265	-	89	64.748	ENSTBEG00000016759	-	77	64.748	Tupaia_belangeri
ENSETEG00000011265	-	100	85.256	ENSTBEG00000013022	-	100	85.256	Tupaia_belangeri
ENSETEG00000011265	-	100	66.667	ENSTBEG00000015356	-	100	73.718	Tupaia_belangeri
ENSETEG00000011265	-	100	90.385	ENSTTRG00000007827	SNRPC	85	91.558	Tursiops_truncatus
ENSETEG00000011265	-	62	92.708	ENSUAMG00000014125	SNRPC	52	92.208	Ursus_americanus
ENSETEG00000011265	-	97	87.417	ENSVVUG00000010467	-	85	87.582	Vulpes_vulpes
ENSETEG00000011265	-	100	91.026	ENSVVUG00000021947	-	98	91.026	Vulpes_vulpes
ENSETEG00000011265	-	100	82.051	ENSXETG00000024721	snrpc	98	82.051	Xenopus_tropicalis
ENSETEG00000011265	-	54	56.977	ENSXCOG00000015871	-	98	60.256	Xiphophorus_couchianus