EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000011832 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 1760 bases
Position: chrGeneScaffold_7107:8796-10555
Accession: 13629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000009598	RRM_1	PF00076.22	1.2e-58	1	3
ENSETEP00000009598	RRM_1	PF00076.22	1.2e-58	2	3
ENSETEP00000009598	RRM_1	PF00076.22	1.2e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000011832	PABPC5-201	1152	-	ENSETEP00000009598	383 (aa)	-	UPI0000E4118B

Gene Model

Click here to download ENSETEG00000011832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000011832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000011832	PABPC5	67	33.333	ENSETEG00000020276	TIAL1	71	33.333
ENSETEG00000011832	PABPC5	72	35.802	ENSETEG00000006134	ELAVL2	83	35.802
ENSETEG00000011832	PABPC5	67	33.333	ENSETEG00000010021	TIA1	69	33.333
ENSETEG00000011832	PABPC5	64	40.278	ENSETEG00000013779	ELAVL4	51	40.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000011832	PABPC5	99	78.796	ENSG00000174740	PABPC5	100	91.584	Homo_sapiens
ENSETEG00000011832	PABPC5	99	78.534	ENSAMEG00000020114	PABPC5	100	78.534	Ailuropoda_melanoleuca
ENSETEG00000011832	PABPC5	99	78.796	ENSANAG00000005063	PABPC5	99	78.796	Aotus_nancymaae
ENSETEG00000011832	PABPC5	100	78.329	ENSBTAG00000019942	PABPC5	100	78.329	Bos_taurus
ENSETEG00000011832	PABPC5	99	78.272	ENSCJAG00000003665	PABPC5	99	78.272	Callithrix_jacchus
ENSETEG00000011832	PABPC5	100	78.329	ENSCAFG00000017452	PABPC5	100	78.329	Canis_familiaris
ENSETEG00000011832	PABPC5	100	78.329	ENSCHIG00000019004	PABPC5	100	78.329	Capra_hircus
ENSETEG00000011832	PABPC5	100	78.590	ENSTSYG00000036351	PABPC5	100	78.590	Carlito_syrichta
ENSETEG00000011832	PABPC5	65	96.552	ENSCAPG00000010714	PABPC5	100	96.552	Cavia_aperea
ENSETEG00000011832	PABPC5	100	75.718	ENSCPOG00000002555	PABPC5	100	75.718	Cavia_porcellus
ENSETEG00000011832	PABPC5	99	78.796	ENSCCAG00000032154	PABPC5	99	78.796	Cebus_capucinus
ENSETEG00000011832	PABPC5	99	78.534	ENSCATG00000043083	PABPC5	99	78.534	Cercocebus_atys
ENSETEG00000011832	PABPC5	100	75.979	ENSCLAG00000000647	PABPC5	100	75.979	Chinchilla_lanigera
ENSETEG00000011832	PABPC5	99	78.534	ENSCSAG00000000065	PABPC5	99	78.534	Chlorocebus_sabaeus
ENSETEG00000011832	PABPC5	99	78.534	ENSCANG00000011473	PABPC5	99	78.534	Colobus_angolensis_palliatus
ENSETEG00000011832	PABPC5	100	75.979	ENSCGRG00000018699	Pabpc5	100	75.979	Cricetulus_griseus_crigri
ENSETEG00000011832	PABPC5	100	78.590	ENSEASG00005014396	PABPC5	100	78.590	Equus_asinus_asinus
ENSETEG00000011832	PABPC5	100	78.590	ENSECAG00000003452	PABPC5	100	78.590	Equus_caballus
ENSETEG00000011832	PABPC5	100	78.329	ENSFCAG00000004998	PABPC5	100	78.329	Felis_catus
ENSETEG00000011832	PABPC5	100	77.023	ENSFDAG00000000126	PABPC5	100	77.023	Fukomys_damarensis
ENSETEG00000011832	PABPC5	99	78.796	ENSGGOG00000007622	PABPC5	99	78.796	Gorilla_gorilla
ENSETEG00000011832	PABPC5	53	92.574	ENSJJAG00000011960	Pabpc5	100	92.574	Jaculus_jaculus
ENSETEG00000011832	PABPC5	99	78.534	ENSMFAG00000024561	PABPC5	99	78.534	Macaca_fascicularis
ENSETEG00000011832	PABPC5	99	78.534	ENSMMUG00000011562	PABPC5	99	78.534	Macaca_mulatta
ENSETEG00000011832	PABPC5	99	78.534	ENSMNEG00000037604	PABPC5	99	78.534	Macaca_nemestrina
ENSETEG00000011832	PABPC5	99	78.534	ENSMLEG00000028318	PABPC5	99	78.534	Mandrillus_leucophaeus
ENSETEG00000011832	PABPC5	100	77.285	ENSMICG00000041706	PABPC5	100	77.285	Microcebus_murinus
ENSETEG00000011832	PABPC5	100	77.285	ENSMOCG00000001554	Pabpc5	100	77.285	Microtus_ochrogaster
ENSETEG00000011832	PABPC5	99	75.591	MGP_CAROLIEiJ_G0033367	Pabpc5	99	75.591	Mus_caroli
ENSETEG00000011832	PABPC5	99	76.115	ENSMUSG00000034732	Pabpc5	99	76.115	Mus_musculus
ENSETEG00000011832	PABPC5	100	76.501	MGP_PahariEiJ_G0031908	Pabpc5	100	76.501	Mus_pahari
ENSETEG00000011832	PABPC5	99	76.115	MGP_SPRETEiJ_G0034533	Pabpc5	99	76.115	Mus_spretus
ENSETEG00000011832	PABPC5	100	77.807	ENSMPUG00000018465	PABPC5	100	77.807	Mustela_putorius_furo
ENSETEG00000011832	PABPC5	100	77.023	ENSMLUG00000008244	PABPC5	100	77.023	Myotis_lucifugus
ENSETEG00000011832	PABPC5	53	90.594	ENSNGAG00000004371	Pabpc5	100	90.594	Nannospalax_galili
ENSETEG00000011832	PABPC5	99	78.796	ENSNLEG00000035086	PABPC5	99	78.796	Nomascus_leucogenys
ENSETEG00000011832	PABPC5	98	69.820	ENSOPRG00000000856	PABPC5	100	69.820	Ochotona_princeps
ENSETEG00000011832	PABPC5	100	78.851	ENSOCUG00000010919	PABPC5	100	78.851	Oryctolagus_cuniculus
ENSETEG00000011832	PABPC5	100	77.807	ENSOGAG00000006882	PABPC5	100	77.807	Otolemur_garnettii
ENSETEG00000011832	PABPC5	100	78.329	ENSOARG00000010260	PABPC5	100	78.329	Ovis_aries
ENSETEG00000011832	PABPC5	99	78.796	ENSPPAG00000007378	PABPC5	99	78.796	Pan_paniscus
ENSETEG00000011832	PABPC5	100	78.329	ENSPPRG00000010742	PABPC5	100	78.329	Panthera_pardus
ENSETEG00000011832	PABPC5	100	78.329	ENSPTIG00000001480	PABPC5	100	78.329	Panthera_tigris_altaica
ENSETEG00000011832	PABPC5	99	78.796	ENSPTRG00000022078	PABPC5	99	78.796	Pan_troglodytes
ENSETEG00000011832	PABPC5	99	78.534	ENSPANG00000018282	PABPC5	99	78.534	Papio_anubis
ENSETEG00000011832	PABPC5	100	76.501	ENSPEMG00000000171	Pabpc5	100	76.501	Peromyscus_maniculatus_bairdii
ENSETEG00000011832	PABPC5	99	78.796	ENSPPYG00000020526	PABPC5	99	78.796	Pongo_abelii
ENSETEG00000011832	PABPC5	98	73.913	ENSPCAG00000015577	PABPC5	100	73.913	Procavia_capensis
ENSETEG00000011832	PABPC5	100	78.590	ENSPCOG00000000676	PABPC5	100	78.590	Propithecus_coquereli
ENSETEG00000011832	PABPC5	100	78.329	ENSPVAG00000006465	PABPC5	100	78.329	Pteropus_vampyrus
ENSETEG00000011832	PABPC5	100	76.762	ENSRNOG00000003354	Pabpc5	100	76.762	Rattus_norvegicus
ENSETEG00000011832	PABPC5	99	78.534	ENSRBIG00000011760	PABPC5	99	78.534	Rhinopithecus_bieti
ENSETEG00000011832	PABPC5	99	78.534	ENSRROG00000036708	PABPC5	99	78.534	Rhinopithecus_roxellana
ENSETEG00000011832	PABPC5	99	78.796	ENSSBOG00000008658	PABPC5	99	78.796	Saimiri_boliviensis_boliviensis
ENSETEG00000011832	PABPC5	100	75.718	ENSSARG00000014012	PABPC5	100	75.718	Sorex_araneus
ENSETEG00000011832	PABPC5	100	77.807	ENSSSCG00000040194	PABPC5	100	77.807	Sus_scrofa
ENSETEG00000011832	PABPC5	100	78.590	ENSTBEG00000016482	PABPC5	100	78.590	Tupaia_belangeri
ENSETEG00000011832	PABPC5	100	78.068	ENSUAMG00000013627	PABPC5	100	78.068	Ursus_americanus
ENSETEG00000011832	PABPC5	100	77.807	ENSUMAG00000023934	PABPC5	100	77.807	Ursus_maritimus
ENSETEG00000011832	PABPC5	100	78.068	ENSVPAG00000001063	PABPC5	100	78.068	Vicugna_pacos
ENSETEG00000011832	PABPC5	100	78.590	ENSVVUG00000013172	PABPC5	100	78.590	Vulpes_vulpes