EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000012064 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 58074 bases
Position: chrGeneScaffold_3844:7870-65943
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000009795	zf-CCCH	PF00642.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012064	RC3H1-201	3165	-	ENSETEP00000009795	1055 (aa)	-	UPI0000E4361F

Gene Model

Click here to download ENSETEG00000012064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012064	RC3H1	87	96.527	ENSG00000135870	RC3H1	82	96.527	Homo_sapiens
ENSETEG00000012064	RC3H1	87	95.928	ENSAMEG00000015657	RC3H1	82	95.928	Ailuropoda_melanoleuca
ENSETEG00000012064	RC3H1	87	88.081	ENSAPLG00000005341	RC3H1	81	87.262	Anas_platyrhynchos
ENSETEG00000012064	RC3H1	87	86.848	ENSACAG00000015271	RC3H1	82	86.342	Anolis_carolinensis
ENSETEG00000012064	RC3H1	87	96.647	ENSANAG00000036716	RC3H1	81	96.647	Aotus_nancymaae
ENSETEG00000012064	RC3H1	87	95.808	ENSBTAG00000052708	RC3H1	82	95.808	Bos_taurus
ENSETEG00000012064	RC3H1	87	96.407	ENSCJAG00000009106	RC3H1	81	96.407	Callithrix_jacchus
ENSETEG00000012064	RC3H1	87	96.647	ENSCAFG00000014434	RC3H1	82	96.647	Canis_familiaris
ENSETEG00000012064	RC3H1	87	96.647	ENSCAFG00020017112	RC3H1	81	97.814	Canis_lupus_dingo
ENSETEG00000012064	RC3H1	87	95.928	ENSCHIG00000002873	RC3H1	82	95.928	Capra_hircus
ENSETEG00000012064	RC3H1	87	95.455	ENSTSYG00000003913	RC3H1	81	95.455	Carlito_syrichta
ENSETEG00000012064	RC3H1	87	91.746	ENSCPOG00000004349	RC3H1	81	91.746	Cavia_porcellus
ENSETEG00000012064	RC3H1	86	96.168	ENSCCAG00000025652	RC3H1	81	96.168	Cebus_capucinus
ENSETEG00000012064	RC3H1	87	96.886	ENSCATG00000033497	RC3H1	81	96.886	Cercocebus_atys
ENSETEG00000012064	RC3H1	87	95.813	ENSCLAG00000011267	RC3H1	82	95.813	Chinchilla_lanigera
ENSETEG00000012064	RC3H1	83	96.766	ENSCSAG00000011823	RC3H1	68	96.766	Chlorocebus_sabaeus
ENSETEG00000012064	RC3H1	87	90.357	ENSCPBG00000014670	RC3H1	86	89.762	Chrysemys_picta_bellii
ENSETEG00000012064	RC3H1	87	96.766	ENSCANG00000032120	RC3H1	81	96.766	Colobus_angolensis_palliatus
ENSETEG00000012064	RC3H1	87	94.838	ENSCGRG00001020812	Rc3h1	81	94.611	Cricetulus_griseus_chok1gshd
ENSETEG00000012064	RC3H1	87	94.838	ENSCGRG00000011952	Rc3h1	81	94.611	Cricetulus_griseus_crigri
ENSETEG00000012064	RC3H1	52	94.312	ENSDNOG00000011494	RC3H1	87	94.312	Dasypus_novemcinctus
ENSETEG00000012064	RC3H1	87	94.611	ENSDORG00000004855	Rc3h1	82	94.611	Dipodomys_ordii
ENSETEG00000012064	RC3H1	87	95.569	ENSEASG00005017000	RC3H1	82	95.569	Equus_asinus_asinus
ENSETEG00000012064	RC3H1	87	95.449	ENSECAG00000021208	RC3H1	86	95.449	Equus_caballus
ENSETEG00000012064	RC3H1	69	95.798	ENSEEUG00000014861	RC3H1	74	92.105	Erinaceus_europaeus
ENSETEG00000012064	RC3H1	87	97.126	ENSFCAG00000014924	RC3H1	81	97.126	Felis_catus
ENSETEG00000012064	RC3H1	87	86.936	ENSFALG00000002947	RC3H1	81	86.088	Ficedula_albicollis
ENSETEG00000012064	RC3H1	87	95.335	ENSFDAG00000013303	RC3H1	82	95.335	Fukomys_damarensis
ENSETEG00000012064	RC3H1	87	87.933	ENSGALG00000004587	RC3H1	85	87.081	Gallus_gallus
ENSETEG00000012064	RC3H1	87	89.167	ENSGAGG00000018194	RC3H1	86	88.690	Gopherus_agassizii
ENSETEG00000012064	RC3H1	87	90.822	ENSGGOG00000005735	RC3H1	81	90.822	Gorilla_gorilla
ENSETEG00000012064	RC3H1	75	89.744	ENSHGLG00000004183	-	78	89.744	Heterocephalus_glaber_female
ENSETEG00000012064	RC3H1	87	94.856	ENSHGLG00100008577	RC3H1	82	94.856	Heterocephalus_glaber_male
ENSETEG00000012064	RC3H1	87	95.096	ENSSTOG00000016033	RC3H1	82	95.694	Ictidomys_tridecemlineatus
ENSETEG00000012064	RC3H1	87	96.048	ENSJJAG00000018915	Rc3h1	82	96.048	Jaculus_jaculus
ENSETEG00000012064	RC3H1	87	75.858	ENSLACG00000016186	RC3H1	89	76.185	Latimeria_chalumnae
ENSETEG00000012064	RC3H1	84	97.365	ENSLAFG00000004367	RC3H1	81	97.365	Loxodonta_africana
ENSETEG00000012064	RC3H1	87	96.886	ENSMFAG00000033725	RC3H1	81	96.886	Macaca_fascicularis
ENSETEG00000012064	RC3H1	87	97.006	ENSMMUG00000000630	RC3H1	82	97.006	Macaca_mulatta
ENSETEG00000012064	RC3H1	87	96.886	ENSMNEG00000035968	RC3H1	81	96.886	Macaca_nemestrina
ENSETEG00000012064	RC3H1	87	96.766	ENSMLEG00000037455	RC3H1	81	96.766	Mandrillus_leucophaeus
ENSETEG00000012064	RC3H1	84	94.478	ENSMAUG00000020864	Rc3h1	83	94.478	Mesocricetus_auratus
ENSETEG00000012064	RC3H1	87	96.647	ENSMICG00000003000	RC3H1	82	96.647	Microcebus_murinus
ENSETEG00000012064	RC3H1	87	94.238	ENSMOCG00000016587	Rc3h1	85	94.238	Microtus_ochrogaster
ENSETEG00000012064	RC3H1	87	92.566	ENSMODG00000004289	RC3H1	81	92.566	Monodelphis_domestica
ENSETEG00000012064	RC3H1	87	93.990	MGP_CAROLIEiJ_G0014756	Rc3h1	81	94.358	Mus_caroli
ENSETEG00000012064	RC3H1	87	93.878	ENSMUSG00000040423	Rc3h1	82	93.878	Mus_musculus
ENSETEG00000012064	RC3H1	87	93.758	MGP_PahariEiJ_G0027992	Rc3h1	81	93.758	Mus_pahari
ENSETEG00000012064	RC3H1	87	93.878	MGP_SPRETEiJ_G0015563	Rc3h1	82	93.878	Mus_spretus
ENSETEG00000012064	RC3H1	87	95.808	ENSMPUG00000004747	RC3H1	82	95.808	Mustela_putorius_furo
ENSETEG00000012064	RC3H1	87	94.132	ENSMLUG00000011127	RC3H1	81	94.132	Myotis_lucifugus
ENSETEG00000012064	RC3H1	87	95.318	ENSNGAG00000011135	Rc3h1	81	95.318	Nannospalax_galili
ENSETEG00000012064	RC3H1	87	96.647	ENSNLEG00000015327	RC3H1	81	96.647	Nomascus_leucogenys
ENSETEG00000012064	RC3H1	84	87.909	ENSOPRG00000013068	RC3H1	78	87.909	Ochotona_princeps
ENSETEG00000012064	RC3H1	87	95.455	ENSODEG00000014185	RC3H1	82	95.455	Octodon_degus
ENSETEG00000012064	RC3H1	87	92.354	ENSOANG00000000924	RC3H1	81	92.354	Ornithorhynchus_anatinus
ENSETEG00000012064	RC3H1	86	95.569	ENSOCUG00000004930	RC3H1	80	95.569	Oryctolagus_cuniculus
ENSETEG00000012064	RC3H1	87	90.909	ENSOGAG00000004044	RC3H1	82	90.909	Otolemur_garnettii
ENSETEG00000012064	RC3H1	87	96.168	ENSOARG00000013011	RC3H1	81	96.168	Ovis_aries
ENSETEG00000012064	RC3H1	87	96.647	ENSPPAG00000039253	RC3H1	81	96.647	Pan_paniscus
ENSETEG00000012064	RC3H1	87	97.365	ENSPPRG00000009007	RC3H1	82	97.365	Panthera_pardus
ENSETEG00000012064	RC3H1	87	96.667	ENSPTIG00000015326	RC3H1	82	96.667	Panthera_tigris_altaica
ENSETEG00000012064	RC3H1	87	96.647	ENSPTRG00000001702	RC3H1	81	96.647	Pan_troglodytes
ENSETEG00000012064	RC3H1	87	96.886	ENSPANG00000008886	RC3H1	81	96.886	Papio_anubis
ENSETEG00000012064	RC3H1	87	90.369	ENSPSIG00000016181	RC3H1	82	90.250	Pelodiscus_sinensis
ENSETEG00000012064	RC3H1	87	93.758	ENSPEMG00000011966	Rc3h1	81	93.637	Peromyscus_maniculatus_bairdii
ENSETEG00000012064	RC3H1	68	93.548	ENSPCIG00000002058	RC3H1	89	93.680	Phascolarctos_cinereus
ENSETEG00000012064	RC3H1	84	96.647	ENSPPYG00000000490	RC3H1	81	96.647	Pongo_abelii
ENSETEG00000012064	RC3H1	74	97.368	ENSPCAG00000010775	RC3H1	74	97.368	Procavia_capensis
ENSETEG00000012064	RC3H1	76	96.084	ENSPCOG00000021795	RC3H1	82	96.084	Propithecus_coquereli
ENSETEG00000012064	RC3H1	81	99.441	ENSPVAG00000007593	RC3H1	81	84.910	Pteropus_vampyrus
ENSETEG00000012064	RC3H1	77	64.269	ENSPNAG00000023439	rc3h1a	78	92.011	Pygocentrus_nattereri
ENSETEG00000012064	RC3H1	87	96.886	ENSRBIG00000037743	RC3H1	81	96.886	Rhinopithecus_bieti
ENSETEG00000012064	RC3H1	87	96.766	ENSRROG00000036546	RC3H1	81	96.766	Rhinopithecus_roxellana
ENSETEG00000012064	RC3H1	87	96.168	ENSSBOG00000010664	RC3H1	92	96.168	Saimiri_boliviensis_boliviensis
ENSETEG00000012064	RC3H1	87	91.727	ENSSHAG00000007589	RC3H1	81	91.727	Sarcophilus_harrisii
ENSETEG00000012064	RC3H1	67	94.785	ENSSARG00000004660	RC3H1	64	94.785	Sorex_araneus
ENSETEG00000012064	RC3H1	87	84.524	ENSSPUG00000018472	RC3H1	81	84.386	Sphenodon_punctatus
ENSETEG00000012064	RC3H1	87	96.168	ENSSSCG00000015498	RC3H1	86	96.168	Sus_scrofa
ENSETEG00000012064	RC3H1	87	87.575	ENSTGUG00000004090	RC3H1	81	86.603	Taeniopygia_guttata
ENSETEG00000012064	RC3H1	82	95.434	ENSTBEG00000005015	RC3H1	77	95.434	Tupaia_belangeri
ENSETEG00000012064	RC3H1	87	97.006	ENSTTRG00000008572	RC3H1	81	97.006	Tursiops_truncatus
ENSETEG00000012064	RC3H1	87	94.850	ENSUAMG00000019525	RC3H1	81	94.850	Ursus_americanus
ENSETEG00000012064	RC3H1	87	95.689	ENSUMAG00000020087	RC3H1	82	95.689	Ursus_maritimus
ENSETEG00000012064	RC3H1	78	98.093	ENSVPAG00000002591	RC3H1	73	98.093	Vicugna_pacos
ENSETEG00000012064	RC3H1	87	96.186	ENSVVUG00000014201	RC3H1	82	96.186	Vulpes_vulpes
ENSETEG00000012064	RC3H1	87	81.464	ENSXETG00000020030	rc3h1	82	80.992	Xenopus_tropicalis