EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000012123 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 89193 bases
Position: chrGeneScaffold_6260:3013-92205
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000009846	Beta-Casp	PF10996.8	7.3e-19	1	1
ENSETEP00000009846	Lactamase_B	PF00753.27	9.4e-07	1	1
ENSETEP00000009846	RMMBL	PF07521.12	5.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012125	CPSF2-201	2337	-	ENSETEP00000009846	778 (aa)	-	UPI0000E432E5

Gene Model

Click here to download ENSETEG00000012123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012123	CPSF2	100	90.294	ENSG00000165934	CPSF2	100	98.750	Homo_sapiens
ENSETEG00000012123	CPSF2	100	78.481	ENSAPOG00000001242	cpsf2	100	78.481	Acanthochromis_polyacanthus
ENSETEG00000012123	CPSF2	100	78.382	ENSACIG00000009331	cpsf2	100	78.382	Amphilophus_citrinellus
ENSETEG00000012123	CPSF2	100	78.734	ENSAOCG00000014095	cpsf2	100	78.734	Amphiprion_ocellaris
ENSETEG00000012123	CPSF2	100	78.734	ENSAPEG00000009158	cpsf2	100	78.734	Amphiprion_percula
ENSETEG00000012123	CPSF2	96	78.055	ENSATEG00000017644	cpsf2	100	74.333	Anabas_testudineus
ENSETEG00000012123	CPSF2	100	87.277	ENSAPLG00000006330	CPSF2	100	87.277	Anas_platyrhynchos
ENSETEG00000012123	CPSF2	100	86.352	ENSACAG00000009245	CPSF2	100	86.352	Anolis_carolinensis
ENSETEG00000012123	CPSF2	100	90.294	ENSANAG00000022915	CPSF2	100	90.294	Aotus_nancymaae
ENSETEG00000012123	CPSF2	100	78.046	ENSAMXG00000018696	cpsf2	100	78.046	Astyanax_mexicanus
ENSETEG00000012123	CPSF2	100	90.294	ENSBTAG00000010227	CPSF2	100	90.294	Bos_taurus
ENSETEG00000012123	CPSF2	93	47.945	WBGene00017313	cpsf-2	100	39.172	Caenorhabditis_elegans
ENSETEG00000012123	CPSF2	100	90.294	ENSCJAG00000018069	CPSF2	100	90.294	Callithrix_jacchus
ENSETEG00000012123	CPSF2	100	90.421	ENSCAFG00000010909	CPSF2	100	90.421	Canis_familiaris
ENSETEG00000012123	CPSF2	100	90.421	ENSCAFG00020020670	CPSF2	100	90.421	Canis_lupus_dingo
ENSETEG00000012123	CPSF2	100	90.294	ENSCHIG00000023848	CPSF2	100	90.294	Capra_hircus
ENSETEG00000012123	CPSF2	100	89.527	ENSTSYG00000009036	CPSF2	100	89.527	Carlito_syrichta
ENSETEG00000012123	CPSF2	100	90.549	ENSCPOG00000010899	CPSF2	100	90.549	Cavia_porcellus
ENSETEG00000012123	CPSF2	100	90.294	ENSCCAG00000028088	CPSF2	100	90.294	Cebus_capucinus
ENSETEG00000012123	CPSF2	100	90.421	ENSCATG00000030132	CPSF2	100	90.421	Cercocebus_atys
ENSETEG00000012123	CPSF2	100	90.421	ENSCLAG00000012404	CPSF2	100	90.421	Chinchilla_lanigera
ENSETEG00000012123	CPSF2	100	90.421	ENSCSAG00000011300	CPSF2	100	90.421	Chlorocebus_sabaeus
ENSETEG00000012123	CPSF2	100	96.552	ENSCHOG00000012904	CPSF2	100	96.552	Choloepus_hoffmanni
ENSETEG00000012123	CPSF2	100	87.372	ENSCPBG00000008766	CPSF2	97	87.372	Chrysemys_picta_bellii
ENSETEG00000012123	CPSF2	93	60.000	ENSCING00000007881	-	92	59.388	Ciona_intestinalis
ENSETEG00000012123	CPSF2	94	89.905	ENSCANG00000041651	CPSF2	100	89.905	Colobus_angolensis_palliatus
ENSETEG00000012123	CPSF2	100	89.655	ENSCGRG00001006901	Cpsf2	100	89.655	Cricetulus_griseus_chok1gshd
ENSETEG00000012123	CPSF2	100	89.655	ENSCGRG00000012416	Cpsf2	100	89.655	Cricetulus_griseus_crigri
ENSETEG00000012123	CPSF2	100	76.709	ENSCSEG00000004116	cpsf2	100	76.709	Cynoglossus_semilaevis
ENSETEG00000012123	CPSF2	100	77.468	ENSCVAG00000000095	cpsf2	100	77.595	Cyprinodon_variegatus
ENSETEG00000012123	CPSF2	100	77.876	ENSDARG00000028971	cpsf2	100	77.876	Danio_rerio
ENSETEG00000012123	CPSF2	100	90.421	ENSDNOG00000042757	CPSF2	100	90.421	Dasypus_novemcinctus
ENSETEG00000012123	CPSF2	100	90.166	ENSDORG00000013709	Cpsf2	100	90.166	Dipodomys_ordii
ENSETEG00000012123	CPSF2	93	60.700	FBgn0027873	Cpsf100	91	60.331	Drosophila_melanogaster
ENSETEG00000012123	CPSF2	91	91.837	ENSEASG00005021193	CPSF2	100	91.837	Equus_asinus_asinus
ENSETEG00000012123	CPSF2	100	90.294	ENSECAG00000023935	CPSF2	100	90.294	Equus_caballus
ENSETEG00000012123	CPSF2	100	76.566	ENSELUG00000008442	cpsf2	100	76.566	Esox_lucius
ENSETEG00000012123	CPSF2	100	90.294	ENSFCAG00000007886	CPSF2	100	90.294	Felis_catus
ENSETEG00000012123	CPSF2	100	87.372	ENSFALG00000002412	CPSF2	100	87.372	Ficedula_albicollis
ENSETEG00000012123	CPSF2	100	90.549	ENSFDAG00000006327	CPSF2	100	90.549	Fukomys_damarensis
ENSETEG00000012123	CPSF2	96	76.371	ENSFHEG00000015465	cpsf2	98	76.632	Fundulus_heteroclitus
ENSETEG00000012123	CPSF2	100	76.166	ENSGMOG00000008761	cpsf2	100	76.166	Gadus_morhua
ENSETEG00000012123	CPSF2	100	86.990	ENSGALG00000010783	CPSF2	100	87.117	Gallus_gallus
ENSETEG00000012123	CPSF2	100	77.848	ENSGAFG00000001407	cpsf2	100	77.848	Gambusia_affinis
ENSETEG00000012123	CPSF2	100	77.089	ENSGACG00000008418	cpsf2	100	77.089	Gasterosteus_aculeatus
ENSETEG00000012123	CPSF2	100	87.500	ENSGAGG00000008287	CPSF2	100	87.500	Gopherus_agassizii
ENSETEG00000012123	CPSF2	100	90.294	ENSGGOG00000011799	CPSF2	100	90.294	Gorilla_gorilla
ENSETEG00000012123	CPSF2	100	77.722	ENSHBUG00000023466	cpsf2	100	77.722	Haplochromis_burtoni
ENSETEG00000012123	CPSF2	100	90.421	ENSHGLG00000018311	CPSF2	100	90.421	Heterocephalus_glaber_female
ENSETEG00000012123	CPSF2	100	90.421	ENSHGLG00100016460	CPSF2	100	90.421	Heterocephalus_glaber_male
ENSETEG00000012123	CPSF2	100	77.215	ENSHCOG00000019527	cpsf2	98	77.215	Hippocampus_comes
ENSETEG00000012123	CPSF2	100	78.426	ENSIPUG00000020857	cpsf2	100	78.426	Ictalurus_punctatus
ENSETEG00000012123	CPSF2	100	90.421	ENSSTOG00000009528	CPSF2	100	90.421	Ictidomys_tridecemlineatus
ENSETEG00000012123	CPSF2	100	90.038	ENSJJAG00000017925	Cpsf2	100	90.038	Jaculus_jaculus
ENSETEG00000012123	CPSF2	100	77.089	ENSKMAG00000019429	cpsf2	100	77.089	Kryptolebias_marmoratus
ENSETEG00000012123	CPSF2	95	76.235	ENSLBEG00000011585	cpsf2	100	76.368	Labrus_bergylta
ENSETEG00000012123	CPSF2	100	81.122	ENSLACG00000019024	CPSF2	100	81.378	Latimeria_chalumnae
ENSETEG00000012123	CPSF2	100	79.747	ENSLOCG00000014102	cpsf2	100	79.747	Lepisosteus_oculatus
ENSETEG00000012123	CPSF2	100	90.191	ENSLAFG00000004891	CPSF2	100	90.191	Loxodonta_africana
ENSETEG00000012123	CPSF2	100	90.421	ENSMFAG00000041212	CPSF2	100	90.421	Macaca_fascicularis
ENSETEG00000012123	CPSF2	100	90.421	ENSMMUG00000000699	CPSF2	100	90.421	Macaca_mulatta
ENSETEG00000012123	CPSF2	100	90.421	ENSMNEG00000031584	CPSF2	100	90.421	Macaca_nemestrina
ENSETEG00000012123	CPSF2	100	90.421	ENSMLEG00000029394	CPSF2	100	90.421	Mandrillus_leucophaeus
ENSETEG00000012123	CPSF2	100	78.354	ENSMAMG00000004235	cpsf2	100	78.354	Mastacembelus_armatus
ENSETEG00000012123	CPSF2	100	77.848	ENSMZEG00005001769	cpsf2	100	77.848	Maylandia_zebra
ENSETEG00000012123	CPSF2	100	87.006	ENSMGAG00000013122	CPSF2	100	87.134	Meleagris_gallopavo
ENSETEG00000012123	CPSF2	100	89.655	ENSMAUG00000015160	Cpsf2	100	89.655	Mesocricetus_auratus
ENSETEG00000012123	CPSF2	100	90.421	ENSMICG00000016441	CPSF2	100	90.421	Microcebus_murinus
ENSETEG00000012123	CPSF2	100	89.527	ENSMOCG00000015372	Cpsf2	100	89.527	Microtus_ochrogaster
ENSETEG00000012123	CPSF2	100	73.797	ENSMMOG00000015590	cpsf2	100	73.797	Mola_mola
ENSETEG00000012123	CPSF2	100	89.783	ENSMODG00000002042	CPSF2	100	89.783	Monodelphis_domestica
ENSETEG00000012123	CPSF2	91	84.731	ENSMALG00000022275	cpsf2	91	84.731	Monopterus_albus
ENSETEG00000012123	CPSF2	100	89.272	ENSMUSG00000041781	Cpsf2	100	89.272	Mus_musculus
ENSETEG00000012123	CPSF2	100	89.527	MGP_PahariEiJ_G0029791	Cpsf2	100	89.527	Mus_pahari
ENSETEG00000012123	CPSF2	100	89.272	MGP_SPRETEiJ_G0018877	Cpsf2	100	89.272	Mus_spretus
ENSETEG00000012123	CPSF2	100	90.421	ENSMPUG00000007617	CPSF2	98	90.421	Mustela_putorius_furo
ENSETEG00000012123	CPSF2	100	89.783	ENSMLUG00000005570	CPSF2	100	89.783	Myotis_lucifugus
ENSETEG00000012123	CPSF2	100	90.038	ENSNGAG00000020312	Cpsf2	100	90.038	Nannospalax_galili
ENSETEG00000012123	CPSF2	100	78.101	ENSNBRG00000022402	cpsf2	100	78.101	Neolamprologus_brichardi
ENSETEG00000012123	CPSF2	100	89.655	ENSNLEG00000017132	CPSF2	100	89.655	Nomascus_leucogenys
ENSETEG00000012123	CPSF2	91	94.194	ENSMEUG00000008138	CPSF2	91	94.194	Notamacropus_eugenii
ENSETEG00000012123	CPSF2	94	82.128	ENSOPRG00000008484	-	100	82.128	Ochotona_princeps
ENSETEG00000012123	CPSF2	100	90.805	ENSODEG00000008682	CPSF2	100	90.805	Octodon_degus
ENSETEG00000012123	CPSF2	100	78.354	ENSONIG00000005901	cpsf2	100	78.354	Oreochromis_niloticus
ENSETEG00000012123	CPSF2	100	89.527	ENSOANG00000003822	CPSF2	100	89.527	Ornithorhynchus_anatinus
ENSETEG00000012123	CPSF2	100	90.038	ENSOCUG00000005713	CPSF2	100	90.038	Oryctolagus_cuniculus
ENSETEG00000012123	CPSF2	100	72.785	ENSORLG00000011628	cpsf2	100	72.785	Oryzias_latipes
ENSETEG00000012123	CPSF2	100	77.595	ENSORLG00020016980	cpsf2	100	77.595	Oryzias_latipes_hni
ENSETEG00000012123	CPSF2	100	77.595	ENSORLG00015011910	cpsf2	100	77.595	Oryzias_latipes_hsok
ENSETEG00000012123	CPSF2	100	76.835	ENSOMEG00000022876	cpsf2	100	76.835	Oryzias_melastigma
ENSETEG00000012123	CPSF2	100	87.852	ENSOARG00000012889	CPSF2	100	87.852	Ovis_aries
ENSETEG00000012123	CPSF2	100	90.294	ENSPPAG00000039666	CPSF2	100	90.294	Pan_paniscus
ENSETEG00000012123	CPSF2	99	90.281	ENSPPRG00000010869	CPSF2	100	90.281	Panthera_pardus
ENSETEG00000012123	CPSF2	100	90.294	ENSPTIG00000021202	CPSF2	100	90.294	Panthera_tigris_altaica
ENSETEG00000012123	CPSF2	100	90.294	ENSPTRG00000006651	CPSF2	100	90.294	Pan_troglodytes
ENSETEG00000012123	CPSF2	100	90.421	ENSPANG00000017417	CPSF2	100	90.421	Papio_anubis
ENSETEG00000012123	CPSF2	100	73.731	ENSPKIG00000021453	cpsf2	100	73.731	Paramormyrops_kingsleyae
ENSETEG00000012123	CPSF2	100	86.735	ENSPSIG00000006289	CPSF2	100	86.735	Pelodiscus_sinensis
ENSETEG00000012123	CPSF2	76	71.144	ENSPMGG00000002511	cpsf2	100	71.310	Periophthalmus_magnuspinnatus
ENSETEG00000012123	CPSF2	100	89.783	ENSPEMG00000007917	Cpsf2	100	89.783	Peromyscus_maniculatus_bairdii
ENSETEG00000012123	CPSF2	100	69.318	ENSPMAG00000006205	cpsf2	100	69.318	Petromyzon_marinus
ENSETEG00000012123	CPSF2	100	89.783	ENSPCIG00000011393	CPSF2	100	89.783	Phascolarctos_cinereus
ENSETEG00000012123	CPSF2	100	77.722	ENSPFOG00000018648	cpsf2	100	77.722	Poecilia_formosa
ENSETEG00000012123	CPSF2	100	77.722	ENSPLAG00000019199	cpsf2	99	77.722	Poecilia_latipinna
ENSETEG00000012123	CPSF2	96	77.792	ENSPMEG00000012100	cpsf2	100	77.036	Poecilia_mexicana
ENSETEG00000012123	CPSF2	100	77.722	ENSPREG00000008960	cpsf2	100	77.722	Poecilia_reticulata
ENSETEG00000012123	CPSF2	63	88.105	ENSPPYG00000029685	-	100	88.105	Pongo_abelii
ENSETEG00000012123	CPSF2	100	90.038	ENSPCAG00000012477	CPSF2	100	90.038	Procavia_capensis
ENSETEG00000012123	CPSF2	100	90.294	ENSPCOG00000026387	CPSF2	100	90.294	Propithecus_coquereli
ENSETEG00000012123	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSETEG00000012123	CPSF2	100	77.876	ENSPNYG00000023356	cpsf2	100	77.876	Pundamilia_nyererei
ENSETEG00000012123	CPSF2	100	79.315	ENSPNAG00000001849	cpsf2	100	79.315	Pygocentrus_nattereri
ENSETEG00000012123	CPSF2	100	89.655	ENSRNOG00000005733	Cpsf2	100	89.655	Rattus_norvegicus
ENSETEG00000012123	CPSF2	100	90.421	ENSRBIG00000044792	CPSF2	100	90.421	Rhinopithecus_bieti
ENSETEG00000012123	CPSF2	100	90.421	ENSRROG00000034875	CPSF2	100	90.421	Rhinopithecus_roxellana
ENSETEG00000012123	CPSF2	100	90.294	ENSSBOG00000024571	CPSF2	100	90.294	Saimiri_boliviensis_boliviensis
ENSETEG00000012123	CPSF2	100	89.911	ENSSHAG00000010458	CPSF2	100	89.911	Sarcophilus_harrisii
ENSETEG00000012123	CPSF2	100	79.061	ENSSFOG00015002117	cpsf2	100	79.061	Scleropages_formosus
ENSETEG00000012123	CPSF2	100	76.582	ENSSMAG00000002001	cpsf2	100	76.582	Scophthalmus_maximus
ENSETEG00000012123	CPSF2	100	78.734	ENSSDUG00000004084	cpsf2	100	78.734	Seriola_dumerili
ENSETEG00000012123	CPSF2	100	78.228	ENSSLDG00000024330	cpsf2	100	78.228	Seriola_lalandi_dorsalis
ENSETEG00000012123	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSETEG00000012123	CPSF2	100	86.990	ENSSPUG00000013485	CPSF2	100	86.990	Sphenodon_punctatus
ENSETEG00000012123	CPSF2	100	77.848	ENSSPAG00000013284	cpsf2	100	77.848	Stegastes_partitus
ENSETEG00000012123	CPSF2	100	90.294	ENSSSCG00000002447	CPSF2	100	90.294	Sus_scrofa
ENSETEG00000012123	CPSF2	100	87.500	ENSTGUG00000012571	-	100	87.500	Taeniopygia_guttata
ENSETEG00000012123	CPSF2	100	77.342	ENSTRUG00000003742	cpsf2	100	77.342	Takifugu_rubripes
ENSETEG00000012123	CPSF2	100	76.136	ENSTNIG00000012228	cpsf2	100	76.894	Tetraodon_nigroviridis
ENSETEG00000012123	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSETEG00000012123	CPSF2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSETEG00000012123	CPSF2	100	90.549	ENSUAMG00000028071	CPSF2	100	90.549	Ursus_americanus
ENSETEG00000012123	CPSF2	100	90.549	ENSUMAG00000005029	CPSF2	93	98.400	Ursus_maritimus
ENSETEG00000012123	CPSF2	99	90.537	ENSVPAG00000003503	CPSF2	100	90.537	Vicugna_pacos
ENSETEG00000012123	CPSF2	100	90.421	ENSVVUG00000024642	CPSF2	100	90.421	Vulpes_vulpes
ENSETEG00000012123	CPSF2	100	83.546	ENSXETG00000010289	cpsf2	100	83.546	Xenopus_tropicalis
ENSETEG00000012123	CPSF2	100	77.975	ENSXCOG00000001764	cpsf2	100	77.975	Xiphophorus_couchianus
ENSETEG00000012123	CPSF2	100	78.101	ENSXMAG00000017048	cpsf2	100	78.101	Xiphophorus_maculatus