EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSETEG00000012135 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Echinops_telfairi
Status
putative
Strand
Minus strand
Length
242802 bases
Position
chrGeneScaffold_7362:44684-287485
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSETEP00000009853RRM_1PF00076.227.3e-2912
ENSETEP00000009853RRM_1PF00076.227.3e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSETET00000012136RBMS1-2011143-ENSETEP00000009853380 (aa)-UPI0000E43830
Gene Model
Click here to download ENSETEG00000012135's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012135's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSETEG00000012135RBMS15164.433ENSETEG00000010200RBMS25164.286
ENSETEG00000012135RBMS16859.542ENSETEG00000009485-5959.542
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSETEG00000012135RBMS110086.614ENSG00000153250RBMS110099.213Homo_sapiens
ENSETEG00000012135RBMS19558.011ENSAPOG00000013761rbms1a8958.382Acanthochromis_polyacanthus
ENSETEG00000012135RBMS19367.422ENSAPOG00000024437-9462.810Acanthochromis_polyacanthus
ENSETEG00000012135RBMS110084.675ENSAMEG00000012661RBMS19984.675Ailuropoda_melanoleuca
ENSETEG00000012135RBMS17658.276ENSACIG00000000113rbms1a7858.478Amphilophus_citrinellus
ENSETEG00000012135RBMS19968.883ENSACIG00000021498RBMS19468.883Amphilophus_citrinellus
ENSETEG00000012135RBMS19968.947ENSAOCG00000014482-9568.947Amphiprion_ocellaris
ENSETEG00000012135RBMS19558.287ENSAOCG00000010066rbms1a8958.671Amphiprion_ocellaris
ENSETEG00000012135RBMS19968.684ENSAPEG00000018371-9568.684Amphiprion_percula
ENSETEG00000012135RBMS19558.287ENSAPEG00000023563rbms1a8958.671Amphiprion_percula
ENSETEG00000012135RBMS19966.755ENSATEG00000018573RBMS18967.330Anabas_testudineus
ENSETEG00000012135RBMS19558.011ENSATEG00000015450rbms1a8958.382Anabas_testudineus
ENSETEG00000012135RBMS110081.102ENSAPLG00000007282RBMS19681.102Anas_platyrhynchos
ENSETEG00000012135RBMS110081.201ENSACAG00000011984RBMS17979.373Anolis_carolinensis
ENSETEG00000012135RBMS18484.783ENSANAG00000024424RBMS110084.783Aotus_nancymaae
ENSETEG00000012135RBMS19966.755ENSACLG00000013048RBMS19466.755Astatotilapia_calliptera
ENSETEG00000012135RBMS19157.061ENSACLG00000021512rbms1a9057.225Astatotilapia_calliptera
ENSETEG00000012135RBMS19967.905ENSAMXG00000009969RBMS19468.182Astyanax_mexicanus
ENSETEG00000012135RBMS19265.341ENSAMXG00000002146rbms1a8865.341Astyanax_mexicanus
ENSETEG00000012135RBMS110086.352ENSBTAG00000005180RBMS19486.352Bos_taurus
ENSETEG00000012135RBMS110086.877ENSCJAG00000014861-9686.089Callithrix_jacchus
ENSETEG00000012135RBMS19782.656ENSCJAG00000022465-9782.804Callithrix_jacchus
ENSETEG00000012135RBMS110082.677ENSCJAG00000012871-9982.713Callithrix_jacchus
ENSETEG00000012135RBMS110086.614ENSCAFG00000009922RBMS19486.614Canis_familiaris
ENSETEG00000012135RBMS110085.827ENSCAFG00020006120RBMS19485.827Canis_lupus_dingo
ENSETEG00000012135RBMS110085.564ENSCHIG00000023380RBMS19585.564Capra_hircus
ENSETEG00000012135RBMS110086.877ENSTSYG00000005584RBMS19982.152Carlito_syrichta
ENSETEG00000012135RBMS110086.877ENSCPOG00000012310RBMS110082.620Cavia_porcellus
ENSETEG00000012135RBMS110086.877ENSCCAG00000033841RBMS19986.877Cebus_capucinus
ENSETEG00000012135RBMS110086.877ENSCATG00000043032RBMS19986.877Cercocebus_atys
ENSETEG00000012135RBMS110086.614ENSCLAG00000003031RBMS19586.614Chinchilla_lanigera
ENSETEG00000012135RBMS110086.877ENSCSAG00000015687RBMS19486.877Chlorocebus_sabaeus
ENSETEG00000012135RBMS15197.248ENSCHOG00000001579RBMS16597.248Choloepus_hoffmanni
ENSETEG00000012135RBMS19982.368ENSCPBG00000026455RBMS19582.368Chrysemys_picta_bellii
ENSETEG00000012135RBMS110086.877ENSCANG00000042152RBMS19986.877Colobus_angolensis_palliatus
ENSETEG00000012135RBMS110085.564ENSCGRG00001022833Rbms19485.564Cricetulus_griseus_chok1gshd
ENSETEG00000012135RBMS110085.564ENSCGRG00000008824Rbms110082.116Cricetulus_griseus_crigri
ENSETEG00000012135RBMS19556.630ENSCSEG00000000889rbms1a9056.936Cynoglossus_semilaevis
ENSETEG00000012135RBMS19965.344ENSCSEG00000010652RBMS19464.489Cynoglossus_semilaevis
ENSETEG00000012135RBMS19557.735ENSCVAG00000014698rbms1a8957.803Cyprinodon_variegatus
ENSETEG00000012135RBMS19965.426ENSCVAG00000002027RBMS19666.193Cyprinodon_variegatus
ENSETEG00000012135RBMS19264.773ENSDARG00000074023rbms1a8764.773Danio_rerio
ENSETEG00000012135RBMS19281.250ENSDNOG00000040691RBMS19581.250Dasypus_novemcinctus
ENSETEG00000012135RBMS110086.614ENSDORG00000007103Rbms19686.614Dipodomys_ordii
ENSETEG00000012135RBMS110085.827ENSEASG00005023132RBMS19485.827Equus_asinus_asinus
ENSETEG00000012135RBMS110085.827ENSECAG00000019894RBMS19485.827Equus_caballus
ENSETEG00000012135RBMS171100.000ENSEEUG00000005628RBMS167100.000Erinaceus_europaeus
ENSETEG00000012135RBMS19960.526ENSELUG00000019328RBMS19460.526Esox_lucius
ENSETEG00000012135RBMS19760.870ENSELUG00000018923rbms1a9462.178Esox_lucius
ENSETEG00000012135RBMS110086.089ENSFCAG00000012524RBMS19486.089Felis_catus
ENSETEG00000012135RBMS19280.114ENSFALG00000004440RBMS19480.114Ficedula_albicollis
ENSETEG00000012135RBMS110086.877ENSFDAG00000015692RBMS110082.620Fukomys_damarensis
ENSETEG00000012135RBMS19558.564ENSFHEG00000005662rbms1a6785.606Fundulus_heteroclitus
ENSETEG00000012135RBMS19964.894ENSFHEG00000000720RBMS18965.909Fundulus_heteroclitus
ENSETEG00000012135RBMS18855.362ENSGMOG00000000525rbms1a9955.182Gadus_morhua
ENSETEG00000012135RBMS110081.365ENSGALG00000011132RBMS19581.365Gallus_gallus
ENSETEG00000012135RBMS19558.011ENSGAFG00000011633rbms1a9558.382Gambusia_affinis
ENSETEG00000012135RBMS19266.193ENSGAFG00000007708RBMS18866.193Gambusia_affinis
ENSETEG00000012135RBMS19366.856ENSGACG00000005671RBMS18967.045Gasterosteus_aculeatus
ENSETEG00000012135RBMS19553.704ENSGACG00000015174rbms1a9158.154Gasterosteus_aculeatus
ENSETEG00000012135RBMS19982.105ENSGAGG00000007866RBMS19582.105Gopherus_agassizii
ENSETEG00000012135RBMS110086.614ENSGGOG00000001264RBMS19886.614Gorilla_gorilla
ENSETEG00000012135RBMS110084.252ENSGGOG00000043756-9484.252Gorilla_gorilla
ENSETEG00000012135RBMS19268.376ENSHBUG00000004516RBMS19268.376Haplochromis_burtoni
ENSETEG00000012135RBMS19157.061ENSHBUG00000004802rbms1a9057.225Haplochromis_burtoni
ENSETEG00000012135RBMS110086.089ENSHGLG00000010387RBMS19686.089Heterocephalus_glaber_female
ENSETEG00000012135RBMS110086.089ENSHGLG00100014105RBMS110081.864Heterocephalus_glaber_male
ENSETEG00000012135RBMS19556.630ENSHCOG00000020097rbms1a8956.936Hippocampus_comes
ENSETEG00000012135RBMS19967.021ENSHCOG00000016668RBMS19467.021Hippocampus_comes
ENSETEG00000012135RBMS19970.479ENSIPUG00000014677RBMS18870.739Ictalurus_punctatus
ENSETEG00000012135RBMS19266.193ENSIPUG00000010131RBMS18866.193Ictalurus_punctatus
ENSETEG00000012135RBMS110087.139ENSSTOG00000012501RBMS110082.872Ictidomys_tridecemlineatus
ENSETEG00000012135RBMS110085.302ENSJJAG00000016543Rbms19485.302Jaculus_jaculus
ENSETEG00000012135RBMS19969.149ENSKMAG00000013911RBMS19469.149Kryptolebias_marmoratus
ENSETEG00000012135RBMS19556.630ENSKMAG00000011839-8956.936Kryptolebias_marmoratus
ENSETEG00000012135RBMS19158.213ENSLBEG00000025962rbms1a8958.382Labrus_bergylta
ENSETEG00000012135RBMS19968.883ENSLBEG00000005787RBMS19468.883Labrus_bergylta
ENSETEG00000012135RBMS110072.280ENSLACG00000004324RBMS19571.503Latimeria_chalumnae
ENSETEG00000012135RBMS19974.468ENSLOCG00000008622rbms1a9474.468Lepisosteus_oculatus
ENSETEG00000012135RBMS110086.352ENSLAFG00000017217RBMS19986.352Loxodonta_africana
ENSETEG00000012135RBMS110086.877ENSMFAG00000000274RBMS19986.877Macaca_fascicularis
ENSETEG00000012135RBMS110086.877ENSMMUG00000016825RBMS19986.877Macaca_mulatta
ENSETEG00000012135RBMS110086.877ENSMNEG00000039425RBMS19986.877Macaca_nemestrina
ENSETEG00000012135RBMS110086.614ENSMLEG00000031517RBMS19986.614Mandrillus_leucophaeus
ENSETEG00000012135RBMS19366.006ENSMAMG00000003159-9266.382Mastacembelus_armatus
ENSETEG00000012135RBMS19556.354ENSMAMG00000005018rbms1a8956.647Mastacembelus_armatus
ENSETEG00000012135RBMS18667.073ENSMZEG00005007313RBMS19166.972Maylandia_zebra
ENSETEG00000012135RBMS19157.061ENSMZEG00005005661rbms1a9057.225Maylandia_zebra
ENSETEG00000012135RBMS19280.966ENSMGAG00000011054RBMS110079.027Meleagris_gallopavo
ENSETEG00000012135RBMS110085.039ENSMAUG00000008550Rbms19485.039Mesocricetus_auratus
ENSETEG00000012135RBMS110086.089ENSMICG00000008325RBMS19986.089Microcebus_murinus
ENSETEG00000012135RBMS110084.777ENSMOCG00000022617Rbms19484.777Microtus_ochrogaster
ENSETEG00000012135RBMS19867.733ENSMMOG00000003707RBMS19467.733Mola_mola
ENSETEG00000012135RBMS17662.887ENSMMOG00000018249rbms1a7963.103Mola_mola
ENSETEG00000012135RBMS110081.890ENSMODG00000005250RBMS19481.890Monodelphis_domestica
ENSETEG00000012135RBMS18867.164ENSMALG00000015715-8965.903Monopterus_albus
ENSETEG00000012135RBMS19557.735ENSMALG00000014235rbms1a8958.092Monopterus_albus
ENSETEG00000012135RBMS110084.514MGP_CAROLIEiJ_G0023586Rbms19484.514Mus_caroli
ENSETEG00000012135RBMS110084.514ENSMUSG00000026970Rbms19484.514Mus_musculus
ENSETEG00000012135RBMS110084.252MGP_PahariEiJ_G0025037Rbms19484.252Mus_pahari
ENSETEG00000012135RBMS110084.777MGP_SPRETEiJ_G0024508Rbms18798.137Mus_spretus
ENSETEG00000012135RBMS110082.872ENSMPUG00000000539RBMS19482.872Mustela_putorius_furo
ENSETEG00000012135RBMS110080.952ENSMLUG00000008762RBMS19580.952Myotis_lucifugus
ENSETEG00000012135RBMS110086.089ENSNGAG00000013636Rbms19486.089Nannospalax_galili
ENSETEG00000012135RBMS19362.890ENSNBRG00000015151RBMS19463.068Neolamprologus_brichardi
ENSETEG00000012135RBMS17661.379ENSNBRG00000020217rbms1a8161.592Neolamprologus_brichardi
ENSETEG00000012135RBMS110086.614ENSNLEG00000001667RBMS19786.614Nomascus_leucogenys
ENSETEG00000012135RBMS18484.161ENSMEUG00000000746RBMS110084.161Notamacropus_eugenii
ENSETEG00000012135RBMS110093.701ENSOPRG00000012431RBMS19493.701Ochotona_princeps
ENSETEG00000012135RBMS110085.827ENSODEG00000013934RBMS19485.827Octodon_degus
ENSETEG00000012135RBMS19157.637ENSONIG00000003329rbms1a8857.803Oreochromis_niloticus
ENSETEG00000012135RBMS19967.287ENSONIG00000008934RBMS19467.287Oreochromis_niloticus
ENSETEG00000012135RBMS110082.152ENSOANG00000006166RBMS19682.152Ornithorhynchus_anatinus
ENSETEG00000012135RBMS110085.302ENSOCUG00000017365RBMS18985.302Oryctolagus_cuniculus
ENSETEG00000012135RBMS19556.354ENSORLG00000003917rbms1a9056.647Oryzias_latipes
ENSETEG00000012135RBMS19464.804ENSORLG00000016818RBMS18965.722Oryzias_latipes
ENSETEG00000012135RBMS19464.525ENSORLG00020022335RBMS18965.439Oryzias_latipes_hni
ENSETEG00000012135RBMS19556.077ENSORLG00020018663rbms1a9056.358Oryzias_latipes_hni
ENSETEG00000012135RBMS19556.354ENSORLG00015016556rbms1a9056.647Oryzias_latipes_hsok
ENSETEG00000012135RBMS19465.084ENSORLG00015018208RBMS18966.006Oryzias_latipes_hsok
ENSETEG00000012135RBMS19564.543ENSOMEG00000002394RBMS18865.909Oryzias_melastigma
ENSETEG00000012135RBMS19284.463ENSOGAG00000002900RBMS19484.463Otolemur_garnettii
ENSETEG00000012135RBMS110085.564ENSOARG00000006870RBMS19485.564Ovis_aries
ENSETEG00000012135RBMS110086.614ENSPPAG00000040083RBMS19986.614Pan_paniscus
ENSETEG00000012135RBMS19982.850ENSPPAG00000036520-9983.245Pan_paniscus
ENSETEG00000012135RBMS110086.089ENSPPRG00000005040RBMS19486.089Panthera_pardus
ENSETEG00000012135RBMS110086.089ENSPTIG00000021240RBMS19486.089Panthera_tigris_altaica
ENSETEG00000012135RBMS110086.614ENSPTRG00000052304RBMS19986.614Pan_troglodytes
ENSETEG00000012135RBMS110084.514ENSPTRG00000039358-9984.514Pan_troglodytes
ENSETEG00000012135RBMS110086.877ENSPANG00000001383RBMS19986.877Papio_anubis
ENSETEG00000012135RBMS19969.048ENSPKIG00000001498rbms1a8868.555Paramormyrops_kingsleyae
ENSETEG00000012135RBMS19369.972ENSPKIG00000012818rbms1a8870.170Paramormyrops_kingsleyae
ENSETEG00000012135RBMS19981.316ENSPSIG00000010240RBMS19481.316Pelodiscus_sinensis
ENSETEG00000012135RBMS19360.795ENSPMGG00000006310RBMS19560.969Periophthalmus_magnuspinnatus
ENSETEG00000012135RBMS19155.043ENSPMGG00000004341rbms1a9055.202Periophthalmus_magnuspinnatus
ENSETEG00000012135RBMS110086.614ENSPEMG00000009449Rbms19786.614Peromyscus_maniculatus_bairdii
ENSETEG00000012135RBMS110081.890ENSPCIG00000018405RBMS19581.890Phascolarctos_cinereus
ENSETEG00000012135RBMS19558.011ENSPFOG00000016116rbms1a8958.382Poecilia_formosa
ENSETEG00000012135RBMS19967.553ENSPFOG00000017483RBMS19467.553Poecilia_formosa
ENSETEG00000012135RBMS19266.477ENSPLAG00000000920RBMS18866.477Poecilia_latipinna
ENSETEG00000012135RBMS19558.011ENSPLAG00000013864rbms1a8958.382Poecilia_latipinna
ENSETEG00000012135RBMS19967.553ENSPMEG00000015838RBMS19467.553Poecilia_mexicana
ENSETEG00000012135RBMS19558.011ENSPMEG00000016185rbms1a8958.382Poecilia_mexicana
ENSETEG00000012135RBMS19967.287ENSPREG00000008146RBMS19467.287Poecilia_reticulata
ENSETEG00000012135RBMS19558.011ENSPREG00000020161rbms1a8958.382Poecilia_reticulata
ENSETEG00000012135RBMS110082.872ENSPPYG00000012879-9482.872Pongo_abelii
ENSETEG00000012135RBMS110081.365ENSPCAG00000009673RBMS19481.365Procavia_capensis
ENSETEG00000012135RBMS110086.352ENSPCOG00000027294RBMS19486.352Propithecus_coquereli
ENSETEG00000012135RBMS178100.000ENSPVAG00000010429RBMS173100.000Pteropus_vampyrus
ENSETEG00000012135RBMS19967.287ENSPNYG00000002643RBMS19467.287Pundamilia_nyererei
ENSETEG00000012135RBMS19265.625ENSPNAG00000010225rbms1a8865.625Pygocentrus_nattereri
ENSETEG00000012135RBMS19968.966ENSPNAG00000023479RBMS18869.318Pygocentrus_nattereri
ENSETEG00000012135RBMS110084.777ENSRNOG00000008482Rbms19881.360Rattus_norvegicus
ENSETEG00000012135RBMS110086.877ENSRBIG00000044262RBMS19986.649Rhinopithecus_bieti
ENSETEG00000012135RBMS110086.877ENSRROG00000043108RBMS19986.877Rhinopithecus_roxellana
ENSETEG00000012135RBMS110084.496ENSSBOG00000034705RBMS19984.496Saimiri_boliviensis_boliviensis
ENSETEG00000012135RBMS110081.627ENSSHAG00000012271RBMS19481.627Sarcophilus_harrisii
ENSETEG00000012135RBMS19268.376ENSSFOG00015014493rbms1a9568.376Scleropages_formosus
ENSETEG00000012135RBMS19871.850ENSSFOG00015022929rbms19371.850Scleropages_formosus
ENSETEG00000012135RBMS19157.349ENSSMAG00000012722rbms1a9557.514Scophthalmus_maximus
ENSETEG00000012135RBMS19366.856ENSSMAG00000012152RBMS18768.502Scophthalmus_maximus
ENSETEG00000012135RBMS19968.617ENSSDUG00000018803RBMS19468.617Seriola_dumerili
ENSETEG00000012135RBMS19558.011ENSSDUG00000020602rbms1a9558.382Seriola_dumerili
ENSETEG00000012135RBMS19558.011ENSSLDG00000009495rbms1a8958.382Seriola_lalandi_dorsalis
ENSETEG00000012135RBMS19968.351ENSSLDG00000016556RBMS19468.351Seriola_lalandi_dorsalis
ENSETEG00000012135RBMS110072.441ENSSARG00000011085RBMS19472.441Sorex_araneus
ENSETEG00000012135RBMS19280.966ENSSPUG00000017163RBMS19480.966Sphenodon_punctatus
ENSETEG00000012135RBMS19557.735ENSSPAG00000005371rbms1a8958.092Stegastes_partitus
ENSETEG00000012135RBMS19968.351ENSSPAG00000000059RBMS19468.351Stegastes_partitus
ENSETEG00000012135RBMS19284.659ENSSSCG00000015888RBMS19485.564Sus_scrofa
ENSETEG00000012135RBMS110081.365ENSTGUG00000006606RBMS19481.365Taeniopygia_guttata
ENSETEG00000012135RBMS19364.589ENSTRUG00000005466-9563.421Takifugu_rubripes
ENSETEG00000012135RBMS19156.105ENSTRUG00000017155rbms1a8956.069Takifugu_rubripes
ENSETEG00000012135RBMS19354.108ENSTNIG00000009477rbms1a9953.846Tetraodon_nigroviridis
ENSETEG00000012135RBMS19964.987ENSTNIG00000016496RBMS19766.477Tetraodon_nigroviridis
ENSETEG00000012135RBMS18298.125ENSTBEG00000016156RBMS18398.125Tupaia_belangeri
ENSETEG00000012135RBMS110086.089ENSTTRG00000011058RBMS110086.089Tursiops_truncatus
ENSETEG00000012135RBMS110085.302ENSUAMG00000022331RBMS19485.302Ursus_americanus
ENSETEG00000012135RBMS110085.564ENSUMAG00000008605RBMS19885.564Ursus_maritimus
ENSETEG00000012135RBMS19385.674ENSVPAG00000002716RBMS19485.674Vicugna_pacos
ENSETEG00000012135RBMS110082.368ENSVVUG00000018682RBMS19484.659Vulpes_vulpes
ENSETEG00000012135RBMS110072.251ENSXETG00000016204rbms19971.466Xenopus_tropicalis
ENSETEG00000012135RBMS19556.354ENSXCOG00000001659rbms1a8956.647Xiphophorus_couchianus
ENSETEG00000012135RBMS19266.193ENSXCOG00000000211RBMS19566.193Xiphophorus_couchianus
ENSETEG00000012135RBMS19558.011ENSXMAG00000001802rbms1a8958.382Xiphophorus_maculatus
ENSETEG00000012135RBMS19966.755ENSXMAG00000011405RBMS19466.755Xiphophorus_maculatus

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