EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000012421 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 115618 bases
Position: chrGeneScaffold_3015:3023-118640
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000010074	Rif1_N	PF12231.8	9.8e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012426	RIF1-201	7377	-	ENSETEP00000010074	2458 (aa)	-	UPI0000E42E7B

Gene Model

Click here to download ENSETEG00000012421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012421	RIF1	92	72.273	ENSG00000080345	RIF1	94	78.212	Homo_sapiens
ENSETEG00000012421	RIF1	60	57.522	ENSAPOG00000011073	rif1	59	57.522	Acanthochromis_polyacanthus
ENSETEG00000012421	RIF1	92	73.748	ENSAMEG00000008461	RIF1	94	73.748	Ailuropoda_melanoleuca
ENSETEG00000012421	RIF1	54	57.080	ENSACIG00000017765	rif1	59	57.080	Amphilophus_citrinellus
ENSETEG00000012421	RIF1	60	56.195	ENSAOCG00000017231	rif1	60	56.195	Amphiprion_ocellaris
ENSETEG00000012421	RIF1	63	49.698	ENSAPEG00000013228	rif1	63	49.578	Amphiprion_percula
ENSETEG00000012421	RIF1	62	58.407	ENSATEG00000022887	rif1	63	58.407	Anabas_testudineus
ENSETEG00000012421	RIF1	73	60.609	ENSAPLG00000007092	RIF1	71	60.723	Anas_platyrhynchos
ENSETEG00000012421	RIF1	65	55.287	ENSACAG00000003714	RIF1	67	55.287	Anolis_carolinensis
ENSETEG00000012421	RIF1	94	71.840	ENSANAG00000024840	RIF1	94	71.840	Aotus_nancymaae
ENSETEG00000012421	RIF1	66	46.105	ENSAMXG00000010910	rif1	67	46.334	Astyanax_mexicanus
ENSETEG00000012421	RIF1	86	72.298	ENSBTAG00000021020	RIF1	94	72.959	Bos_taurus
ENSETEG00000012421	RIF1	94	72.252	ENSCJAG00000003138	RIF1	94	72.252	Callithrix_jacchus
ENSETEG00000012421	RIF1	94	72.231	ENSCAFG00000005670	RIF1	92	72.231	Canis_familiaris
ENSETEG00000012421	RIF1	94	72.231	ENSCAFG00020016401	RIF1	94	72.231	Canis_lupus_dingo
ENSETEG00000012421	RIF1	92	72.610	ENSCHIG00000020327	RIF1	94	72.610	Capra_hircus
ENSETEG00000012421	RIF1	93	66.338	ENSTSYG00000008861	RIF1	94	66.692	Carlito_syrichta
ENSETEG00000012421	RIF1	70	67.308	ENSCAPG00000008957	RIF1	87	54.254	Cavia_aperea
ENSETEG00000012421	RIF1	91	66.591	ENSCPOG00000037898	RIF1	91	66.591	Cavia_porcellus
ENSETEG00000012421	RIF1	92	70.023	ENSCCAG00000024760	RIF1	91	70.023	Cebus_capucinus
ENSETEG00000012421	RIF1	92	72.975	ENSCATG00000033353	RIF1	94	73.051	Cercocebus_atys
ENSETEG00000012421	RIF1	88	70.728	ENSCLAG00000001517	RIF1	91	70.728	Chinchilla_lanigera
ENSETEG00000012421	RIF1	92	72.576	ENSCSAG00000016089	RIF1	92	72.652	Chlorocebus_sabaeus
ENSETEG00000012421	RIF1	89	87.391	ENSCHOG00000007187	RIF1	89	87.391	Choloepus_hoffmanni
ENSETEG00000012421	RIF1	78	57.936	ENSCPBG00000025885	RIF1	79	65.774	Chrysemys_picta_bellii
ENSETEG00000012421	RIF1	92	71.234	ENSCANG00000028962	RIF1	94	72.899	Colobus_angolensis_palliatus
ENSETEG00000012421	RIF1	91	69.335	ENSCGRG00001024589	Rif1	91	69.660	Cricetulus_griseus_chok1gshd
ENSETEG00000012421	RIF1	89	71.078	ENSCGRG00000010713	Rif1	91	71.417	Cricetulus_griseus_crigri
ENSETEG00000012421	RIF1	60	57.277	ENSCSEG00000003945	rif1	64	57.277	Cynoglossus_semilaevis
ENSETEG00000012421	RIF1	61	52.091	ENSCVAG00000022479	rif1	63	52.091	Cyprinodon_variegatus
ENSETEG00000012421	RIF1	61	52.574	ENSDARG00000062650	rif1	62	52.574	Danio_rerio
ENSETEG00000012421	RIF1	91	70.963	ENSDNOG00000011194	RIF1	89	70.963	Dasypus_novemcinctus
ENSETEG00000012421	RIF1	86	91.582	ENSEASG00005023434	RIF1	95	91.582	Equus_asinus_asinus
ENSETEG00000012421	RIF1	92	72.555	ENSECAG00000012679	RIF1	91	75.602	Equus_caballus
ENSETEG00000012421	RIF1	61	56.680	ENSELUG00000006826	rif1	53	56.680	Esox_lucius
ENSETEG00000012421	RIF1	92	72.576	ENSFCAG00000029742	RIF1	94	73.030	Felis_catus
ENSETEG00000012421	RIF1	64	58.525	ENSFALG00000013874	RIF1	69	57.972	Ficedula_albicollis
ENSETEG00000012421	RIF1	91	70.758	ENSFDAG00000006538	RIF1	94	70.758	Fukomys_damarensis
ENSETEG00000012421	RIF1	59	54.425	ENSFHEG00000013721	rif1	56	54.425	Fundulus_heteroclitus
ENSETEG00000012421	RIF1	55	52.941	ENSGMOG00000003517	rif1	83	52.941	Gadus_morhua
ENSETEG00000012421	RIF1	69	58.541	ENSGALG00000012484	RIF1	69	58.630	Gallus_gallus
ENSETEG00000012421	RIF1	64	45.817	ENSGAFG00000017196	rif1	67	48.663	Gambusia_affinis
ENSETEG00000012421	RIF1	59	53.304	ENSGACG00000008579	rif1	64	53.509	Gasterosteus_aculeatus
ENSETEG00000012421	RIF1	71	68.627	ENSGAGG00000012595	RIF1	85	58.984	Gopherus_agassizii
ENSETEG00000012421	RIF1	81	75.071	ENSGGOG00000040178	RIF1	90	75.071	Gorilla_gorilla
ENSETEG00000012421	RIF1	60	57.848	ENSHBUG00000007125	rif1	65	57.848	Haplochromis_burtoni
ENSETEG00000012421	RIF1	86	70.628	ENSHGLG00100009807	RIF1	94	70.628	Heterocephalus_glaber_male
ENSETEG00000012421	RIF1	60	54.032	ENSHCOG00000015943	rif1	56	54.032	Hippocampus_comes
ENSETEG00000012421	RIF1	63	48.387	ENSIPUG00000021703	rif1	64	48.387	Ictalurus_punctatus
ENSETEG00000012421	RIF1	92	71.915	ENSSTOG00000020712	RIF1	92	71.991	Ictidomys_tridecemlineatus
ENSETEG00000012421	RIF1	92	67.445	ENSJJAG00000023000	Rif1	92	67.771	Jaculus_jaculus
ENSETEG00000012421	RIF1	60	52.018	ENSKMAG00000002852	rif1	62	52.018	Kryptolebias_marmoratus
ENSETEG00000012421	RIF1	59	58.407	ENSLBEG00000023196	rif1	54	58.407	Labrus_bergylta
ENSETEG00000012421	RIF1	74	55.031	ENSLACG00000005425	RIF1	67	58.912	Latimeria_chalumnae
ENSETEG00000012421	RIF1	66	49.961	ENSLOCG00000002657	rif1	69	50.039	Lepisosteus_oculatus
ENSETEG00000012421	RIF1	91	77.955	ENSLAFG00000009796	RIF1	92	77.955	Loxodonta_africana
ENSETEG00000012421	RIF1	92	72.727	ENSMFAG00000032233	RIF1	94	72.803	Macaca_fascicularis
ENSETEG00000012421	RIF1	92	72.652	ENSMMUG00000008611	RIF1	94	72.727	Macaca_mulatta
ENSETEG00000012421	RIF1	92	72.824	ENSMNEG00000031616	RIF1	94	72.899	Macaca_nemestrina
ENSETEG00000012421	RIF1	92	72.899	ENSMLEG00000042945	RIF1	94	72.975	Mandrillus_leucophaeus
ENSETEG00000012421	RIF1	76	45.860	ENSMAMG00000001745	rif1	63	47.253	Mastacembelus_armatus
ENSETEG00000012421	RIF1	60	57.965	ENSMZEG00005020920	rif1	64	57.965	Maylandia_zebra
ENSETEG00000012421	RIF1	71	58.775	ENSMGAG00000012732	RIF1	65	71.556	Meleagris_gallopavo
ENSETEG00000012421	RIF1	85	80.223	ENSMAUG00000013158	Rif1	90	80.223	Mesocricetus_auratus
ENSETEG00000012421	RIF1	92	72.748	ENSMICG00000046127	RIF1	94	73.051	Microcebus_murinus
ENSETEG00000012421	RIF1	91	66.591	ENSMOCG00000009381	Rif1	91	66.591	Microtus_ochrogaster
ENSETEG00000012421	RIF1	59	59.420	ENSMMOG00000006519	rif1	58	59.420	Mola_mola
ENSETEG00000012421	RIF1	84	62.209	ENSMODG00000003703	RIF1	85	61.937	Monodelphis_domestica
ENSETEG00000012421	RIF1	61	50.000	ENSMALG00000016759	rif1	69	50.000	Monopterus_albus
ENSETEG00000012421	RIF1	91	68.793	MGP_CAROLIEiJ_G0023555	Rif1	92	68.892	Mus_caroli
ENSETEG00000012421	RIF1	91	68.882	ENSMUSG00000036202	Rif1	92	68.981	Mus_musculus
ENSETEG00000012421	RIF1	88	78.571	MGP_PahariEiJ_G0025006	Rif1	90	78.571	Mus_pahari
ENSETEG00000012421	RIF1	91	69.172	MGP_SPRETEiJ_G0024476	Rif1	92	69.196	Mus_spretus
ENSETEG00000012421	RIF1	93	72.513	ENSMPUG00000000371	RIF1	94	72.437	Mustela_putorius_furo
ENSETEG00000012421	RIF1	82	69.512	ENSMLUG00000003376	RIF1	94	69.697	Myotis_lucifugus
ENSETEG00000012421	RIF1	92	69.190	ENSNGAG00000009268	Rif1	92	69.592	Nannospalax_galili
ENSETEG00000012421	RIF1	63	46.556	ENSNBRG00000014257	rif1	69	45.593	Neolamprologus_brichardi
ENSETEG00000012421	RIF1	92	71.150	ENSNLEG00000010955	RIF1	94	71.396	Nomascus_leucogenys
ENSETEG00000012421	RIF1	58	85.268	ENSMEUG00000007601	-	63	85.268	Notamacropus_eugenii
ENSETEG00000012421	RIF1	92	67.396	ENSODEG00000003950	RIF1	91	67.396	Octodon_degus
ENSETEG00000012421	RIF1	62	51.481	ENSONIG00000013657	rif1	68	46.249	Oreochromis_niloticus
ENSETEG00000012421	RIF1	59	75.610	ENSOANG00000006078	-	64	75.610	Ornithorhynchus_anatinus
ENSETEG00000012421	RIF1	95	70.682	ENSOCUG00000017435	RIF1	94	70.682	Oryctolagus_cuniculus
ENSETEG00000012421	RIF1	63	44.880	ENSORLG00020001302	rif1	68	45.164	Oryzias_latipes_hni
ENSETEG00000012421	RIF1	63	44.657	ENSORLG00015000009	rif1	68	44.737	Oryzias_latipes_hsok
ENSETEG00000012421	RIF1	62	44.684	ENSOMEG00000021513	rif1	67	44.797	Oryzias_melastigma
ENSETEG00000012421	RIF1	92	71.029	ENSOGAG00000006141	RIF1	94	71.029	Otolemur_garnettii
ENSETEG00000012421	RIF1	92	72.610	ENSOARG00000008930	RIF1	92	72.610	Ovis_aries
ENSETEG00000012421	RIF1	92	71.970	ENSPPAG00000023754	RIF1	92	72.294	Pan_paniscus
ENSETEG00000012421	RIF1	92	72.403	ENSPPRG00000003618	RIF1	94	72.858	Panthera_pardus
ENSETEG00000012421	RIF1	92	72.479	ENSPTIG00000020652	RIF1	94	72.934	Panthera_tigris_altaica
ENSETEG00000012421	RIF1	92	72.045	ENSPTRG00000012534	RIF1	92	72.369	Pan_troglodytes
ENSETEG00000012421	RIF1	92	72.899	ENSPANG00000008525	RIF1	94	72.975	Papio_anubis
ENSETEG00000012421	RIF1	63	48.632	ENSPKIG00000004267	rif1	68	48.632	Paramormyrops_kingsleyae
ENSETEG00000012421	RIF1	60	54.806	ENSPMGG00000016141	rif1	72	54.806	Periophthalmus_magnuspinnatus
ENSETEG00000012421	RIF1	89	71.122	ENSPEMG00000000446	Rif1	93	71.122	Peromyscus_maniculatus_bairdii
ENSETEG00000012421	RIF1	80	61.928	ENSPCIG00000009185	RIF1	83	61.928	Phascolarctos_cinereus
ENSETEG00000012421	RIF1	59	54.867	ENSPFOG00000017804	rif1	61	54.867	Poecilia_formosa
ENSETEG00000012421	RIF1	52	54.867	ENSPFOG00000000554	-	58	54.867	Poecilia_formosa
ENSETEG00000012421	RIF1	63	46.720	ENSPLAG00000017945	rif1	69	46.277	Poecilia_latipinna
ENSETEG00000012421	RIF1	50	53.982	ENSPMEG00000006897	-	57	53.982	Poecilia_mexicana
ENSETEG00000012421	RIF1	59	55.111	ENSPREG00000018052	rif1	61	53.540	Poecilia_reticulata
ENSETEG00000012421	RIF1	92	72.197	ENSPPYG00000012846	RIF1	94	72.273	Pongo_abelii
ENSETEG00000012421	RIF1	75	78.788	ENSPCAG00000009032	RIF1	77	72.000	Procavia_capensis
ENSETEG00000012421	RIF1	92	72.067	ENSPCOG00000027888	RIF1	94	72.369	Propithecus_coquereli
ENSETEG00000012421	RIF1	83	74.645	ENSPVAG00000014276	RIF1	85	74.645	Pteropus_vampyrus
ENSETEG00000012421	RIF1	60	57.965	ENSPNYG00000012940	rif1	63	57.965	Pundamilia_nyererei
ENSETEG00000012421	RIF1	66	46.693	ENSPNAG00000016685	rif1	67	46.916	Pygocentrus_nattereri
ENSETEG00000012421	RIF1	91	66.971	ENSRNOG00000054901	Rif1	94	66.971	Rattus_norvegicus
ENSETEG00000012421	RIF1	92	71.537	ENSRBIG00000003704	RIF1	94	71.612	Rhinopithecus_bieti
ENSETEG00000012421	RIF1	92	72.500	ENSRROG00000028206	RIF1	94	72.824	Rhinopithecus_roxellana
ENSETEG00000012421	RIF1	89	72.641	ENSSBOG00000029530	RIF1	92	72.554	Saimiri_boliviensis_boliviensis
ENSETEG00000012421	RIF1	80	60.952	ENSSHAG00000018552	RIF1	83	60.952	Sarcophilus_harrisii
ENSETEG00000012421	RIF1	63	49.196	ENSSFOG00015021539	rif1	69	49.196	Scleropages_formosus
ENSETEG00000012421	RIF1	74	45.591	ENSSMAG00000011704	rif1	56	57.522	Scophthalmus_maximus
ENSETEG00000012421	RIF1	59	59.735	ENSSDUG00000015632	rif1	62	59.735	Seriola_dumerili
ENSETEG00000012421	RIF1	59	59.735	ENSSLDG00000019531	rif1	59	59.735	Seriola_lalandi_dorsalis
ENSETEG00000012421	RIF1	73	59.435	ENSSPUG00000003062	RIF1	81	58.819	Sphenodon_punctatus
ENSETEG00000012421	RIF1	50	54.898	ENSSPAG00000018359	rif1	75	54.898	Stegastes_partitus
ENSETEG00000012421	RIF1	92	71.873	ENSSSCG00000016395	RIF1	92	71.873	Sus_scrofa
ENSETEG00000012421	RIF1	63	49.673	ENSTRUG00000015808	rif1	67	49.673	Takifugu_rubripes
ENSETEG00000012421	RIF1	63	47.181	ENSTNIG00000011538	rif1	68	47.181	Tetraodon_nigroviridis
ENSETEG00000012421	RIF1	73	70.028	ENSTBEG00000016082	RIF1	72	70.028	Tupaia_belangeri
ENSETEG00000012421	RIF1	94	72.975	ENSTTRG00000011190	RIF1	94	72.899	Tursiops_truncatus
ENSETEG00000012421	RIF1	82	71.852	ENSUAMG00000026385	RIF1	93	71.852	Ursus_americanus
ENSETEG00000012421	RIF1	92	73.237	ENSUMAG00000000337	RIF1	93	75.049	Ursus_maritimus
ENSETEG00000012421	RIF1	92	69.371	ENSVPAG00000002162	RIF1	94	69.371	Vicugna_pacos
ENSETEG00000012421	RIF1	94	72.307	ENSVVUG00000011293	RIF1	94	72.307	Vulpes_vulpes
ENSETEG00000012421	RIF1	71	57.357	ENSXETG00000004530	rif1	73	57.357	Xenopus_tropicalis
ENSETEG00000012421	RIF1	64	44.015	ENSXMAG00000000506	rif1	64	44.093	Xiphophorus_maculatus