EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000012497 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 78815 bases
Position: chrGeneScaffold_8977:1369-80183
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000010137	La	PF05383.17	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012497	LARP1B-201	2748	-	ENSETEP00000010137	916 (aa)	-	UPI0000E40FC8

Gene Model

Click here to download ENSETEG00000012497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000012497	LARP1B	79	61.890	ENSETEG00000020251	LARP1	82	61.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012497	LARP1B	89	83.193	ENSG00000138709	LARP1B	96	83.333	Homo_sapiens
ENSETEG00000012497	LARP1B	85	56.315	ENSAPOG00000020101	larp1b	75	54.806	Acanthochromis_polyacanthus
ENSETEG00000012497	LARP1B	72	54.479	ENSACIG00000023890	larp1b	65	53.182	Amphilophus_citrinellus
ENSETEG00000012497	LARP1B	64	54.132	ENSAOCG00000014268	larp1b	63	54.545	Amphiprion_ocellaris
ENSETEG00000012497	LARP1B	85	56.185	ENSAPEG00000004126	larp1b	75	54.806	Amphiprion_percula
ENSETEG00000012497	LARP1B	88	54.035	ENSATEG00000017849	larp1b	75	54.467	Anabas_testudineus
ENSETEG00000012497	LARP1B	82	66.766	ENSAPLG00000010129	LARP1B	84	66.468	Anas_platyrhynchos
ENSETEG00000012497	LARP1B	81	72.496	ENSACAG00000011338	LARP1B	75	72.178	Anolis_carolinensis
ENSETEG00000012497	LARP1B	75	83.800	ENSANAG00000034618	LARP1B	81	82.800	Aotus_nancymaae
ENSETEG00000012497	LARP1B	85	54.247	ENSACLG00000011948	larp1b	74	53.228	Astatotilapia_calliptera
ENSETEG00000012497	LARP1B	71	55.051	ENSAMXG00000006805	larp1b	63	54.225	Astyanax_mexicanus
ENSETEG00000012497	LARP1B	89	83.333	ENSBTAG00000012135	LARP1B	78	87.197	Bos_taurus
ENSETEG00000012497	LARP1B	88	84.034	ENSCJAG00000003338	LARP1B	88	84.034	Callithrix_jacchus
ENSETEG00000012497	LARP1B	89	82.353	ENSCAFG00000003831	LARP1B	88	82.353	Canis_familiaris
ENSETEG00000012497	LARP1B	89	82.353	ENSCAFG00020018899	LARP1B	78	97.170	Canis_lupus_dingo
ENSETEG00000012497	LARP1B	89	80.833	ENSCHIG00000023144	LARP1B	87	80.833	Capra_hircus
ENSETEG00000012497	LARP1B	88	84.034	ENSCCAG00000021948	LARP1B	88	84.034	Cebus_capucinus
ENSETEG00000012497	LARP1B	89	84.874	ENSCATG00000013541	LARP1B	88	84.874	Cercocebus_atys
ENSETEG00000012497	LARP1B	89	84.874	ENSCSAG00000003582	LARP1B	88	84.874	Chlorocebus_sabaeus
ENSETEG00000012497	LARP1B	84	80.822	ENSCHOG00000005354	LARP1B	83	80.822	Choloepus_hoffmanni
ENSETEG00000012497	LARP1B	89	70.875	ENSCPBG00000017480	LARP1B	76	70.445	Chrysemys_picta_bellii
ENSETEG00000012497	LARP1B	85	79.076	ENSCANG00000026958	LARP1B	78	92.453	Colobus_angolensis_palliatus
ENSETEG00000012497	LARP1B	72	54.599	ENSCSEG00000013519	larp1b	75	53.868	Cynoglossus_semilaevis
ENSETEG00000012497	LARP1B	73	54.425	ENSCVAG00000005046	larp1b	75	53.857	Cyprinodon_variegatus
ENSETEG00000012497	LARP1B	72	52.907	ENSDARG00000061169	larp1b	60	53.991	Danio_rerio
ENSETEG00000012497	LARP1B	79	51.143	ENSEBUG00000003668	larp1b	75	50.714	Eptatretus_burgeri
ENSETEG00000012497	LARP1B	89	82.353	ENSEASG00005018106	LARP1B	78	97.170	Equus_asinus_asinus
ENSETEG00000012497	LARP1B	89	82.353	ENSECAG00000001088	LARP1B	72	82.353	Equus_caballus
ENSETEG00000012497	LARP1B	54	56.598	ENSELUG00000023774	larp1b	62	56.812	Esox_lucius
ENSETEG00000012497	LARP1B	88	64.646	ENSFALG00000008098	LARP1B	87	64.214	Ficedula_albicollis
ENSETEG00000012497	LARP1B	88	54.363	ENSFHEG00000010264	larp1b	72	54.363	Fundulus_heteroclitus
ENSETEG00000012497	LARP1B	79	55.521	ENSGMOG00000005207	larp1b	71	55.521	Gadus_morhua
ENSETEG00000012497	LARP1B	87	63.411	ENSGALG00000010207	LARP1B	76	62.974	Gallus_gallus
ENSETEG00000012497	LARP1B	72	55.341	ENSGAFG00000012012	larp1b	76	54.043	Gambusia_affinis
ENSETEG00000012497	LARP1B	86	51.014	ENSGACG00000004609	larp1b	74	52.754	Gasterosteus_aculeatus
ENSETEG00000012497	LARP1B	89	70.732	ENSGAGG00000017209	LARP1B	75	70.301	Gopherus_agassizii
ENSETEG00000012497	LARP1B	89	84.034	ENSGGOG00000015900	LARP1B	89	84.034	Gorilla_gorilla
ENSETEG00000012497	LARP1B	85	54.260	ENSHBUG00000009730	larp1b	74	53.237	Haplochromis_burtoni
ENSETEG00000012497	LARP1B	73	52.430	ENSHCOG00000000918	larp1b	92	53.166	Hippocampus_comes
ENSETEG00000012497	LARP1B	75	53.047	ENSIPUG00000012138	larp1b	64	53.463	Ictalurus_punctatus
ENSETEG00000012497	LARP1B	72	54.586	ENSKMAG00000011589	larp1b	75	54.709	Kryptolebias_marmoratus
ENSETEG00000012497	LARP1B	75	54.376	ENSLBEG00000005655	larp1b	75	54.871	Labrus_bergylta
ENSETEG00000012497	LARP1B	88	65.850	ENSLACG00000015247	LARP1B	72	75.904	Latimeria_chalumnae
ENSETEG00000012497	LARP1B	88	63.195	ENSLOCG00000010684	larp1b	80	63.623	Lepisosteus_oculatus
ENSETEG00000012497	LARP1B	89	84.874	ENSMFAG00000002218	LARP1B	89	84.874	Macaca_fascicularis
ENSETEG00000012497	LARP1B	89	84.874	ENSMMUG00000021347	LARP1B	89	84.874	Macaca_mulatta
ENSETEG00000012497	LARP1B	89	84.874	ENSMNEG00000030406	LARP1B	97	84.874	Macaca_nemestrina
ENSETEG00000012497	LARP1B	84	83.562	ENSMLEG00000009306	LARP1B	89	78.788	Mandrillus_leucophaeus
ENSETEG00000012497	LARP1B	87	54.113	ENSMAMG00000000081	larp1b	76	54.401	Mastacembelus_armatus
ENSETEG00000012497	LARP1B	72	54.600	ENSMZEG00005002545	larp1b	85	53.188	Maylandia_zebra
ENSETEG00000012497	LARP1B	83	62.085	ENSMGAG00000004809	LARP1B	84	62.310	Meleagris_gallopavo
ENSETEG00000012497	LARP1B	89	89.076	ENSMICG00000036111	LARP1B	88	89.076	Microcebus_murinus
ENSETEG00000012497	LARP1B	89	81.513	ENSMODG00000012300	LARP1B	72	81.513	Monodelphis_domestica
ENSETEG00000012497	LARP1B	73	55.376	ENSMALG00000003638	larp1b	74	55.376	Monopterus_albus
ENSETEG00000012497	LARP1B	89	83.193	ENSMPUG00000017365	LARP1B	72	83.193	Mustela_putorius_furo
ENSETEG00000012497	LARP1B	82	77.695	ENSMLUG00000010229	LARP1B	81	77.246	Myotis_lucifugus
ENSETEG00000012497	LARP1B	72	51.885	ENSNBRG00000023846	larp1b	67	50.653	Neolamprologus_brichardi
ENSETEG00000012497	LARP1B	89	82.353	ENSNLEG00000013819	LARP1B	89	82.353	Nomascus_leucogenys
ENSETEG00000012497	LARP1B	87	81.731	ENSMEUG00000010308	LARP1B	88	81.731	Notamacropus_eugenii
ENSETEG00000012497	LARP1B	88	67.101	ENSOPRG00000005478	LARP1B	88	67.536	Ochotona_princeps
ENSETEG00000012497	LARP1B	85	53.566	ENSONIG00000012386	larp1b	83	53.566	Oreochromis_niloticus
ENSETEG00000012497	LARP1B	89	84.874	ENSOCUG00000013330	LARP1B	87	84.874	Oryctolagus_cuniculus
ENSETEG00000012497	LARP1B	75	51.836	ENSORLG00000017954	larp1b	65	52.806	Oryzias_latipes
ENSETEG00000012497	LARP1B	74	51.622	ENSORLG00020013081	larp1b	61	52.518	Oryzias_latipes_hni
ENSETEG00000012497	LARP1B	74	53.535	ENSORLG00015009580	larp1b	65	53.535	Oryzias_latipes_hsok
ENSETEG00000012497	LARP1B	75	53.161	ENSOMEG00000004210	larp1b	65	53.305	Oryzias_melastigma
ENSETEG00000012497	LARP1B	84	84.034	ENSOGAG00000005771	LARP1B	86	84.034	Otolemur_garnettii
ENSETEG00000012497	LARP1B	89	82.500	ENSOARG00000015300	LARP1B	89	82.500	Ovis_aries
ENSETEG00000012497	LARP1B	89	83.193	ENSPPAG00000030439	LARP1B	89	83.193	Pan_paniscus
ENSETEG00000012497	LARP1B	89	82.353	ENSPTRG00000016437	LARP1B	89	82.353	Pan_troglodytes
ENSETEG00000012497	LARP1B	89	84.874	ENSPANG00000012488	LARP1B	89	84.874	Papio_anubis
ENSETEG00000012497	LARP1B	72	49.485	ENSPKIG00000014360	larp1b	70	50.075	Paramormyrops_kingsleyae
ENSETEG00000012497	LARP1B	84	72.340	ENSPSIG00000012885	LARP1B	82	71.884	Pelodiscus_sinensis
ENSETEG00000012497	LARP1B	75	55.108	ENSPMGG00000007207	larp1b	80	54.913	Periophthalmus_magnuspinnatus
ENSETEG00000012497	LARP1B	79	52.474	ENSPMAG00000002700	larp1b	84	51.754	Petromyzon_marinus
ENSETEG00000012497	LARP1B	80	90.909	ENSPCIG00000026516	LARP1B	86	90.909	Phascolarctos_cinereus
ENSETEG00000012497	LARP1B	85	54.820	ENSPFOG00000019519	larp1b	72	54.820	Poecilia_formosa
ENSETEG00000012497	LARP1B	88	54.571	ENSPLAG00000007115	larp1b	74	54.571	Poecilia_latipinna
ENSETEG00000012497	LARP1B	85	55.904	ENSPMEG00000001224	larp1b	72	55.904	Poecilia_mexicana
ENSETEG00000012497	LARP1B	89	80.672	ENSPCAG00000007546	LARP1B	89	80.672	Procavia_capensis
ENSETEG00000012497	LARP1B	77	89.076	ENSPCOG00000021874	LARP1B	87	89.076	Propithecus_coquereli
ENSETEG00000012497	LARP1B	89	77.311	ENSPVAG00000005373	LARP1B	89	77.311	Pteropus_vampyrus
ENSETEG00000012497	LARP1B	72	54.367	ENSPNYG00000017357	larp1b	85	53.043	Pundamilia_nyererei
ENSETEG00000012497	LARP1B	71	56.083	ENSPNAG00000008823	larp1b	65	55.587	Pygocentrus_nattereri
ENSETEG00000012497	LARP1B	89	84.034	ENSRROG00000030771	LARP1B	89	84.034	Rhinopithecus_roxellana
ENSETEG00000012497	LARP1B	61	84.034	ENSSHAG00000014474	LARP1B	84	84.389	Sarcophilus_harrisii
ENSETEG00000012497	LARP1B	85	54.383	ENSSMAG00000006347	larp1b	81	53.936	Scophthalmus_maximus
ENSETEG00000012497	LARP1B	85	56.222	ENSSDUG00000004182	larp1b	75	54.636	Seriola_dumerili
ENSETEG00000012497	LARP1B	72	54.148	ENSSLDG00000014613	larp1b	66	52.670	Seriola_lalandi_dorsalis
ENSETEG00000012497	LARP1B	85	67.033	ENSSPUG00000011837	LARP1B	88	67.033	Sphenodon_punctatus
ENSETEG00000012497	LARP1B	72	55.030	ENSSPAG00000017772	larp1b	75	53.759	Stegastes_partitus
ENSETEG00000012497	LARP1B	89	82.353	ENSSSCG00000034280	LARP1B	82	87.755	Sus_scrofa
ENSETEG00000012497	LARP1B	80	63.150	ENSTGUG00000002098	-	85	62.861	Taeniopygia_guttata
ENSETEG00000012497	LARP1B	73	54.412	ENSTRUG00000005612	larp1b	73	54.412	Takifugu_rubripes
ENSETEG00000012497	LARP1B	72	54.491	ENSTNIG00000012398	larp1b	70	54.819	Tetraodon_nigroviridis
ENSETEG00000012497	LARP1B	87	84.615	ENSTBEG00000004177	LARP1B	88	84.615	Tupaia_belangeri
ENSETEG00000012497	LARP1B	89	74.713	ENSTTRG00000012984	LARP1B	89	74.425	Tursiops_truncatus
ENSETEG00000012497	LARP1B	89	82.353	ENSUMAG00000007373	LARP1B	87	82.353	Ursus_maritimus
ENSETEG00000012497	LARP1B	77	84.270	ENSVPAG00000007223	LARP1B	77	84.127	Vicugna_pacos
ENSETEG00000012497	LARP1B	89	83.193	ENSVVUG00000011307	LARP1B	87	83.193	Vulpes_vulpes
ENSETEG00000012497	LARP1B	86	57.016	ENSXETG00000022512	larp1b	78	57.459	Xenopus_tropicalis
ENSETEG00000012497	LARP1B	72	52.671	ENSXCOG00000004435	larp1b	72	51.489	Xiphophorus_couchianus
ENSETEG00000012497	LARP1B	72	55.786	ENSXMAG00000008150	larp1b	68	55.786	Xiphophorus_maculatus