EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000012527 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 88580 bases
Position: chrGeneScaffold_4903:18692-107271
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000010159	DND1_DSRM	PF14709.7	9.7e-25	1	1
ENSETEP00000010159	RRM_1	PF00076.22	2.2e-38	1	3
ENSETEP00000010159	RRM_1	PF00076.22	2.2e-38	2	3
ENSETEP00000010159	RRM_1	PF00076.22	2.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012526	A1CF-201	1773	-	ENSETEP00000010159	590 (aa)	-	UPI0000E41C8D

Gene Model

Click here to download ENSETEG00000012527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000012527	A1CF	61	72.587	ENSETEG00000014902	RBM46	67	72.587

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012527	A1CF	84	91.349	ENSG00000148584	A1CF	94	90.426	Homo_sapiens
ENSETEG00000012527	A1CF	80	84.058	ENSAPOG00000008259	a1cf	83	84.058	Acanthochromis_polyacanthus
ENSETEG00000012527	A1CF	81	91.304	ENSAMEG00000000523	A1CF	81	91.304	Ailuropoda_melanoleuca
ENSETEG00000012527	A1CF	81	85.145	ENSACIG00000008632	a1cf	82	85.145	Amphilophus_citrinellus
ENSETEG00000012527	A1CF	81	84.058	ENSAOCG00000023744	a1cf	81	84.058	Amphiprion_ocellaris
ENSETEG00000012527	A1CF	81	84.058	ENSAPEG00000009537	a1cf	80	84.058	Amphiprion_percula
ENSETEG00000012527	A1CF	81	84.783	ENSATEG00000013720	a1cf	82	84.783	Anabas_testudineus
ENSETEG00000012527	A1CF	81	90.942	ENSAPLG00000002964	A1CF	81	90.942	Anas_platyrhynchos
ENSETEG00000012527	A1CF	82	87.143	ENSACAG00000015269	A1CF	82	87.143	Anolis_carolinensis
ENSETEG00000012527	A1CF	84	90.753	ENSANAG00000019974	A1CF	82	93.116	Aotus_nancymaae
ENSETEG00000012527	A1CF	81	85.145	ENSACLG00000017428	a1cf	81	85.145	Astatotilapia_calliptera
ENSETEG00000012527	A1CF	73	84.649	ENSAMXG00000018180	a1cf	76	84.649	Astyanax_mexicanus
ENSETEG00000012527	A1CF	81	92.754	ENSBTAG00000021195	A1CF	82	92.754	Bos_taurus
ENSETEG00000012527	A1CF	81	93.116	ENSCJAG00000005045	A1CF	81	93.116	Callithrix_jacchus
ENSETEG00000012527	A1CF	81	91.667	ENSCAFG00000015581	A1CF	81	91.667	Canis_familiaris
ENSETEG00000012527	A1CF	79	95.094	ENSCAFG00020026421	A1CF	80	95.094	Canis_lupus_dingo
ENSETEG00000012527	A1CF	81	92.754	ENSCHIG00000020411	A1CF	81	92.754	Capra_hircus
ENSETEG00000012527	A1CF	78	97.266	ENSTSYG00000001755	A1CF	83	97.266	Carlito_syrichta
ENSETEG00000012527	A1CF	69	95.238	ENSCAPG00000017386	A1CF	83	95.238	Cavia_aperea
ENSETEG00000012527	A1CF	81	92.391	ENSCPOG00000009807	A1CF	81	92.391	Cavia_porcellus
ENSETEG00000012527	A1CF	81	93.116	ENSCCAG00000018168	A1CF	81	93.116	Cebus_capucinus
ENSETEG00000012527	A1CF	81	92.754	ENSCATG00000043715	A1CF	82	92.754	Cercocebus_atys
ENSETEG00000012527	A1CF	81	92.754	ENSCLAG00000010424	A1CF	81	92.754	Chinchilla_lanigera
ENSETEG00000012527	A1CF	81	93.116	ENSCSAG00000007032	A1CF	81	93.116	Chlorocebus_sabaeus
ENSETEG00000012527	A1CF	84	90.378	ENSCHOG00000009089	A1CF	84	90.378	Choloepus_hoffmanni
ENSETEG00000012527	A1CF	81	90.580	ENSCPBG00000026464	A1CF	81	90.580	Chrysemys_picta_bellii
ENSETEG00000012527	A1CF	81	93.116	ENSCANG00000038032	A1CF	81	93.116	Colobus_angolensis_palliatus
ENSETEG00000012527	A1CF	81	92.391	ENSCGRG00001017413	A1cf	81	92.391	Cricetulus_griseus_chok1gshd
ENSETEG00000012527	A1CF	81	92.391	ENSCGRG00000017332	A1cf	81	92.391	Cricetulus_griseus_crigri
ENSETEG00000012527	A1CF	79	86.873	ENSCSEG00000002361	a1cf	78	86.873	Cynoglossus_semilaevis
ENSETEG00000012527	A1CF	79	88.803	ENSCVAG00000010520	a1cf	82	85.145	Cyprinodon_variegatus
ENSETEG00000012527	A1CF	81	85.145	ENSDARG00000002968	a1cf	82	85.145	Danio_rerio
ENSETEG00000012527	A1CF	81	92.115	ENSDNOG00000002829	A1CF	81	92.115	Dasypus_novemcinctus
ENSETEG00000012527	A1CF	79	97.348	ENSEASG00005012924	A1CF	81	97.348	Equus_asinus_asinus
ENSETEG00000012527	A1CF	81	92.754	ENSECAG00000010424	A1CF	81	92.754	Equus_caballus
ENSETEG00000012527	A1CF	56	98.315	ENSEEUG00000000013	A1CF	73	98.315	Erinaceus_europaeus
ENSETEG00000012527	A1CF	81	84.727	ENSELUG00000003159	a1cf	80	84.727	Esox_lucius
ENSETEG00000012527	A1CF	81	90.580	ENSFCAG00000011179	A1CF	82	90.580	Felis_catus
ENSETEG00000012527	A1CF	81	90.580	ENSFALG00000013183	A1CF	82	90.580	Ficedula_albicollis
ENSETEG00000012527	A1CF	81	92.029	ENSFDAG00000019371	A1CF	82	92.029	Fukomys_damarensis
ENSETEG00000012527	A1CF	71	90.521	ENSFHEG00000019652	a1cf	73	90.521	Fundulus_heteroclitus
ENSETEG00000012527	A1CF	77	79.710	ENSGMOG00000018943	a1cf	77	79.710	Gadus_morhua
ENSETEG00000012527	A1CF	78	94.961	ENSGALG00000003765	A1CF	79	94.961	Gallus_gallus
ENSETEG00000012527	A1CF	81	84.058	ENSGAFG00000014868	a1cf	81	84.058	Gambusia_affinis
ENSETEG00000012527	A1CF	80	81.481	ENSGACG00000010241	a1cf	80	80.364	Gasterosteus_aculeatus
ENSETEG00000012527	A1CF	78	94.922	ENSGAGG00000016508	A1CF	79	94.922	Gopherus_agassizii
ENSETEG00000012527	A1CF	84	91.349	ENSGGOG00000009670	A1CF	81	92.754	Gorilla_gorilla
ENSETEG00000012527	A1CF	81	85.507	ENSHBUG00000021959	a1cf	82	85.507	Haplochromis_burtoni
ENSETEG00000012527	A1CF	81	91.304	ENSHGLG00000008955	A1CF	81	91.304	Heterocephalus_glaber_female
ENSETEG00000012527	A1CF	81	89.855	ENSHGLG00100000518	A1CF	81	89.855	Heterocephalus_glaber_male
ENSETEG00000012527	A1CF	73	83.333	ENSHCOG00000017669	a1cf	80	81.884	Hippocampus_comes
ENSETEG00000012527	A1CF	71	85.507	ENSIPUG00000010367	a1cf	75	85.507	Ictalurus_punctatus
ENSETEG00000012527	A1CF	81	85.870	ENSKMAG00000006568	a1cf	81	85.870	Kryptolebias_marmoratus
ENSETEG00000012527	A1CF	80	85.145	ENSLBEG00000020994	a1cf	79	85.145	Labrus_bergylta
ENSETEG00000012527	A1CF	81	87.319	ENSLACG00000008061	A1CF	82	87.319	Latimeria_chalumnae
ENSETEG00000012527	A1CF	81	86.957	ENSLOCG00000006302	a1cf	81	86.957	Lepisosteus_oculatus
ENSETEG00000012527	A1CF	81	94.203	ENSLAFG00000015462	A1CF	81	94.203	Loxodonta_africana
ENSETEG00000012527	A1CF	81	93.116	ENSMFAG00000035948	A1CF	82	93.116	Macaca_fascicularis
ENSETEG00000012527	A1CF	84	91.003	ENSMMUG00000007077	A1CF	82	93.116	Macaca_mulatta
ENSETEG00000012527	A1CF	84	91.003	ENSMNEG00000031454	A1CF	82	92.754	Macaca_nemestrina
ENSETEG00000012527	A1CF	81	92.754	ENSMLEG00000037223	A1CF	81	92.754	Mandrillus_leucophaeus
ENSETEG00000012527	A1CF	79	85.714	ENSMAMG00000010402	a1cf	79	85.714	Mastacembelus_armatus
ENSETEG00000012527	A1CF	81	85.145	ENSMZEG00005013245	a1cf	80	85.145	Maylandia_zebra
ENSETEG00000012527	A1CF	81	90.253	ENSMGAG00000001507	A1CF	81	90.253	Meleagris_gallopavo
ENSETEG00000012527	A1CF	81	91.667	ENSMAUG00000007422	A1cf	81	91.667	Mesocricetus_auratus
ENSETEG00000012527	A1CF	84	90.378	ENSMICG00000003377	A1CF	82	92.754	Microcebus_murinus
ENSETEG00000012527	A1CF	81	92.029	ENSMOCG00000021536	A1cf	81	92.029	Microtus_ochrogaster
ENSETEG00000012527	A1CF	71	89.815	ENSMMOG00000009422	a1cf	78	80.309	Mola_mola
ENSETEG00000012527	A1CF	73	90.580	ENSMODG00000016478	A1CF	77	90.580	Monodelphis_domestica
ENSETEG00000012527	A1CF	81	82.609	ENSMALG00000012992	a1cf	80	82.609	Monopterus_albus
ENSETEG00000012527	A1CF	81	91.304	MGP_CAROLIEiJ_G0022873	A1cf	82	91.304	Mus_caroli
ENSETEG00000012527	A1CF	81	91.304	ENSMUSG00000052595	A1cf	82	91.304	Mus_musculus
ENSETEG00000012527	A1CF	81	90.942	MGP_PahariEiJ_G0014366	A1cf	82	90.942	Mus_pahari
ENSETEG00000012527	A1CF	81	91.304	MGP_SPRETEiJ_G0023792	A1cf	82	91.304	Mus_spretus
ENSETEG00000012527	A1CF	81	87.317	ENSMPUG00000016971	A1CF	81	87.317	Mustela_putorius_furo
ENSETEG00000012527	A1CF	81	92.391	ENSMLUG00000016071	A1CF	81	92.391	Myotis_lucifugus
ENSETEG00000012527	A1CF	81	92.754	ENSNGAG00000015136	A1cf	81	92.754	Nannospalax_galili
ENSETEG00000012527	A1CF	81	85.507	ENSNBRG00000001712	a1cf	82	85.507	Neolamprologus_brichardi
ENSETEG00000012527	A1CF	79	96.169	ENSNLEG00000012028	A1CF	81	96.169	Nomascus_leucogenys
ENSETEG00000012527	A1CF	78	94.922	ENSMEUG00000015909	A1CF	83	94.922	Notamacropus_eugenii
ENSETEG00000012527	A1CF	69	91.176	ENSOPRG00000010667	A1CF	76	91.367	Ochotona_princeps
ENSETEG00000012527	A1CF	81	85.507	ENSONIG00000019105	a1cf	82	85.507	Oreochromis_niloticus
ENSETEG00000012527	A1CF	60	90.580	ENSOANG00000007360	A1CF	77	90.580	Ornithorhynchus_anatinus
ENSETEG00000012527	A1CF	81	91.667	ENSOCUG00000011587	A1CF	82	91.667	Oryctolagus_cuniculus
ENSETEG00000012527	A1CF	80	85.185	ENSORLG00000013342	a1cf	79	85.185	Oryzias_latipes
ENSETEG00000012527	A1CF	80	85.185	ENSORLG00020000586	a1cf	80	85.185	Oryzias_latipes_hni
ENSETEG00000012527	A1CF	80	85.185	ENSORLG00015018569	a1cf	80	85.185	Oryzias_latipes_hsok
ENSETEG00000012527	A1CF	80	84.815	ENSOMEG00000013531	a1cf	82	83.636	Oryzias_melastigma
ENSETEG00000012527	A1CF	81	91.667	ENSOGAG00000012884	A1CF	81	91.667	Otolemur_garnettii
ENSETEG00000012527	A1CF	81	92.754	ENSOARG00000013695	A1CF	81	92.754	Ovis_aries
ENSETEG00000012527	A1CF	84	91.349	ENSPPAG00000028115	A1CF	82	91.349	Pan_paniscus
ENSETEG00000012527	A1CF	81	90.942	ENSPPRG00000012180	A1CF	81	90.942	Panthera_pardus
ENSETEG00000012527	A1CF	81	90.942	ENSPTIG00000021223	A1CF	81	90.942	Panthera_tigris_altaica
ENSETEG00000012527	A1CF	79	95.785	ENSPTRG00000002508	A1CF	80	95.785	Pan_troglodytes
ENSETEG00000012527	A1CF	81	93.116	ENSPANG00000021988	A1CF	82	93.116	Papio_anubis
ENSETEG00000012527	A1CF	80	86.667	ENSPKIG00000025176	a1cf	80	86.667	Paramormyrops_kingsleyae
ENSETEG00000012527	A1CF	81	90.217	ENSPSIG00000010318	A1CF	82	90.217	Pelodiscus_sinensis
ENSETEG00000012527	A1CF	74	83.462	ENSPMGG00000013359	a1cf	75	83.462	Periophthalmus_magnuspinnatus
ENSETEG00000012527	A1CF	81	92.754	ENSPEMG00000015021	A1cf	81	92.754	Peromyscus_maniculatus_bairdii
ENSETEG00000012527	A1CF	81	89.855	ENSPCIG00000002175	A1CF	82	89.855	Phascolarctos_cinereus
ENSETEG00000012527	A1CF	81	84.058	ENSPFOG00000007437	-	81	84.058	Poecilia_formosa
ENSETEG00000012527	A1CF	81	84.058	ENSPFOG00000006683	a1cf	81	84.058	Poecilia_formosa
ENSETEG00000012527	A1CF	81	84.058	ENSPLAG00000000026	a1cf	82	84.058	Poecilia_latipinna
ENSETEG00000012527	A1CF	81	84.058	ENSPLAG00000001210	-	82	84.058	Poecilia_latipinna
ENSETEG00000012527	A1CF	76	83.607	ENSPMEG00000015529	-	80	83.607	Poecilia_mexicana
ENSETEG00000012527	A1CF	76	83.607	ENSPMEG00000000921	a1cf	81	83.607	Poecilia_mexicana
ENSETEG00000012527	A1CF	81	83.696	ENSPREG00000016298	a1cf	81	83.696	Poecilia_reticulata
ENSETEG00000012527	A1CF	81	93.478	ENSPPYG00000002819	A1CF	82	93.478	Pongo_abelii
ENSETEG00000012527	A1CF	63	71.257	ENSPCAG00000006463	A1CF	63	71.257	Procavia_capensis
ENSETEG00000012527	A1CF	81	92.754	ENSPCOG00000024172	A1CF	81	92.754	Propithecus_coquereli
ENSETEG00000012527	A1CF	81	85.507	ENSPNYG00000017944	a1cf	81	85.507	Pundamilia_nyererei
ENSETEG00000012527	A1CF	81	85.507	ENSPNAG00000007704	a1cf	82	85.507	Pygocentrus_nattereri
ENSETEG00000012527	A1CF	81	92.029	ENSRNOG00000033195	A1cf	82	92.029	Rattus_norvegicus
ENSETEG00000012527	A1CF	81	85.507	ENSRBIG00000042892	A1CF	82	95.122	Rhinopithecus_bieti
ENSETEG00000012527	A1CF	78	98.047	ENSRROG00000041398	A1CF	83	98.047	Rhinopithecus_roxellana
ENSETEG00000012527	A1CF	84	90.753	ENSSBOG00000021930	A1CF	82	98.049	Saimiri_boliviensis_boliviensis
ENSETEG00000012527	A1CF	81	90.942	ENSSHAG00000005096	A1CF	82	90.942	Sarcophilus_harrisii
ENSETEG00000012527	A1CF	80	86.296	ENSSFOG00015011774	a1cf	82	85.091	Scleropages_formosus
ENSETEG00000012527	A1CF	79	86.100	ENSSMAG00000013271	a1cf	78	86.100	Scophthalmus_maximus
ENSETEG00000012527	A1CF	81	83.696	ENSSDUG00000013930	a1cf	80	83.696	Seriola_dumerili
ENSETEG00000012527	A1CF	71	83.696	ENSSLDG00000004290	a1cf	73	83.696	Seriola_lalandi_dorsalis
ENSETEG00000012527	A1CF	84	89.806	ENSSARG00000005940	A1CF	83	89.806	Sorex_araneus
ENSETEG00000012527	A1CF	84	85.417	ENSSPUG00000006797	A1CF	82	85.417	Sphenodon_punctatus
ENSETEG00000012527	A1CF	81	93.116	ENSSSCG00000010431	A1CF	81	93.116	Sus_scrofa
ENSETEG00000012527	A1CF	81	90.580	ENSTGUG00000005090	A1CF	81	90.580	Taeniopygia_guttata
ENSETEG00000012527	A1CF	81	83.333	ENSTRUG00000001982	a1cf	81	83.333	Takifugu_rubripes
ENSETEG00000012527	A1CF	83	79.239	ENSTNIG00000003580	a1cf	82	78.966	Tetraodon_nigroviridis
ENSETEG00000012527	A1CF	84	89.320	ENSTTRG00000013190	A1CF	84	89.806	Tursiops_truncatus
ENSETEG00000012527	A1CF	81	91.304	ENSUAMG00000020065	A1CF	82	91.304	Ursus_americanus
ENSETEG00000012527	A1CF	78	95.703	ENSUMAG00000011162	A1CF	80	95.703	Ursus_maritimus
ENSETEG00000012527	A1CF	71	98.578	ENSVPAG00000006130	A1CF	71	98.578	Vicugna_pacos
ENSETEG00000012527	A1CF	81	91.667	ENSVVUG00000002504	A1CF	82	91.667	Vulpes_vulpes
ENSETEG00000012527	A1CF	76	85.306	ENSXETG00000006611	a1cf	75	85.306	Xenopus_tropicalis
ENSETEG00000012527	A1CF	81	84.420	ENSXCOG00000003302	a1cf	82	84.420	Xiphophorus_couchianus
ENSETEG00000012527	A1CF	81	84.420	ENSXMAG00000016703	a1cf	81	84.420	Xiphophorus_maculatus