EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000012540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 173452 bases
Position: chrGeneScaffold_4582:11841-185292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000010170	AF-4	PF05110.13	1e-202	1	3
ENSETEP00000010170	AF-4	PF05110.13	1e-202	2	3
ENSETEP00000010170	AF-4	PF05110.13	1e-202	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012541	-	3702	-	ENSETEP00000010170	1233 (aa)	-	UPI0000E429B8

Gene Model

Click here to download ENSETEG00000012540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012540	-	78	83.436	ENSG00000144218	AFF3	100	89.552	Homo_sapiens
ENSETEG00000012540	-	54	84.049	ENSAMEG00000013204	-	78	83.168	Ailuropoda_melanoleuca
ENSETEG00000012540	-	72	66.501	ENSACAG00000008164	AFF3	73	66.501	Anolis_carolinensis
ENSETEG00000012540	-	59	83.168	ENSANAG00000030084	AFF3	78	83.168	Aotus_nancymaae
ENSETEG00000012540	-	50	62.903	ENSAMXG00000000387	aff2	61	67.339	Astyanax_mexicanus
ENSETEG00000012540	-	73	82.426	ENSBTAG00000012449	AFF3	82	82.426	Bos_taurus
ENSETEG00000012540	-	78	83.436	ENSCJAG00000010071	AFF3	82	82.426	Callithrix_jacchus
ENSETEG00000012540	-	83	83.416	ENSCAFG00000023079	AFF3	83	83.416	Canis_familiaris
ENSETEG00000012540	-	72	82.921	ENSCHIG00000026653	AFF3	78	82.921	Capra_hircus
ENSETEG00000012540	-	52	81.436	ENSTSYG00000029683	AFF3	60	81.436	Carlito_syrichta
ENSETEG00000012540	-	71	81.481	ENSCAPG00000012999	AFF3	90	81.481	Cavia_aperea
ENSETEG00000012540	-	73	81.481	ENSCPOG00000006346	AFF3	87	81.481	Cavia_porcellus
ENSETEG00000012540	-	78	83.168	ENSCATG00000045196	AFF3	82	83.168	Cercocebus_atys
ENSETEG00000012540	-	70	82.673	ENSCLAG00000017100	AFF3	85	82.673	Chinchilla_lanigera
ENSETEG00000012540	-	54	83.168	ENSCSAG00000017193	AFF3	77	83.168	Chlorocebus_sabaeus
ENSETEG00000012540	-	72	73.881	ENSCPBG00000007277	AFF3	78	73.881	Chrysemys_picta_bellii
ENSETEG00000012540	-	50	64.706	ENSCPBG00000020831	AFF2	56	63.668	Chrysemys_picta_bellii
ENSETEG00000012540	-	73	82.209	ENSCGRG00001014566	Aff3	79	81.481	Cricetulus_griseus_chok1gshd
ENSETEG00000012540	-	73	82.209	ENSCGRG00000003408	Aff3	80	81.481	Cricetulus_griseus_crigri
ENSETEG00000012540	-	53	63.158	ENSDARG00000052242	aff2	55	65.038	Danio_rerio
ENSETEG00000012540	-	72	73.260	ENSDORG00000007294	Aff3	100	57.843	Dipodomys_ordii
ENSETEG00000012540	-	77	83.911	ENSEASG00005018275	AFF3	82	83.911	Equus_asinus_asinus
ENSETEG00000012540	-	78	83.911	ENSECAG00000006249	AFF3	82	83.911	Equus_caballus
ENSETEG00000012540	-	73	76.190	ENSEEUG00000004876	AFF3	81	76.190	Erinaceus_europaeus
ENSETEG00000012540	-	83	83.663	ENSFCAG00000029975	AFF3	82	83.663	Felis_catus
ENSETEG00000012540	-	52	60.984	ENSFALG00000012089	AFF2	59	59.344	Ficedula_albicollis
ENSETEG00000012540	-	72	74.074	ENSGALG00000016767	AFF3	78	74.074	Gallus_gallus
ENSETEG00000012540	-	50	63.322	ENSGALG00000009168	AFF2	53	63.322	Gallus_gallus
ENSETEG00000012540	-	78	83.436	ENSGGOG00000034914	AFF3	82	83.416	Gorilla_gorilla
ENSETEG00000012540	-	59	80.693	ENSHGLG00000005004	-	73	80.693	Heterocephalus_glaber_female
ENSETEG00000012540	-	53	64.528	ENSIPUG00000014592	aff2	53	64.528	Ictalurus_punctatus
ENSETEG00000012540	-	78	81.527	ENSSTOG00000012140	AFF3	79	81.527	Ictidomys_tridecemlineatus
ENSETEG00000012540	-	78	81.235	ENSJJAG00000013155	Aff3	80	81.235	Jaculus_jaculus
ENSETEG00000012540	-	78	84.049	ENSLAFG00000012884	AFF3	83	83.210	Loxodonta_africana
ENSETEG00000012540	-	73	83.416	ENSMFAG00000031640	AFF3	78	83.416	Macaca_fascicularis
ENSETEG00000012540	-	57	83.416	ENSMMUG00000022836	-	78	83.416	Macaca_mulatta
ENSETEG00000012540	-	55	80.982	ENSMNEG00000031770	AFF3	72	69.805	Macaca_nemestrina
ENSETEG00000012540	-	78	81.931	ENSMICG00000016001	AFF3	82	82.921	Microcebus_murinus
ENSETEG00000012540	-	54	81.235	ENSMOCG00000005082	-	74	81.235	Microtus_ochrogaster
ENSETEG00000012540	-	50	78.765	ENSMODG00000027810	-	71	78.765	Monodelphis_domestica
ENSETEG00000012540	-	73	79.878	MGP_CAROLIEiJ_G0014063	Aff3	78	79.753	Mus_caroli
ENSETEG00000012540	-	73	79.878	ENSMUSG00000037138	Aff3	79	79.753	Mus_musculus
ENSETEG00000012540	-	73	79.506	MGP_PahariEiJ_G0027310	Aff3	79	79.506	Mus_pahari
ENSETEG00000012540	-	78	79.878	MGP_SPRETEiJ_G0014867	Aff3	82	79.506	Mus_spretus
ENSETEG00000012540	-	77	83.168	ENSMPUG00000012091	AFF3	83	83.168	Mustela_putorius_furo
ENSETEG00000012540	-	78	81.683	ENSNGAG00000002408	Aff3	79	81.683	Nannospalax_galili
ENSETEG00000012540	-	75	82.822	ENSNLEG00000014317	AFF3	83	81.868	Nomascus_leucogenys
ENSETEG00000012540	-	60	85.792	ENSMEUG00000013927	AFF3	67	85.792	Notamacropus_eugenii
ENSETEG00000012540	-	56	76.296	ENSOPRG00000004372	AFF3	55	76.790	Ochotona_princeps
ENSETEG00000012540	-	57	76.658	ENSODEG00000007806	AFF3	75	76.658	Octodon_degus
ENSETEG00000012540	-	83	80.198	ENSOCUG00000009532	AFF3	83	80.198	Oryctolagus_cuniculus
ENSETEG00000012540	-	78	81.595	ENSOGAG00000013262	AFF3	83	76.733	Otolemur_garnettii
ENSETEG00000012540	-	75	84.049	ENSPPAG00000032057	AFF3	83	81.593	Pan_paniscus
ENSETEG00000012540	-	83	83.663	ENSPPRG00000014330	AFF3	82	83.663	Panthera_pardus
ENSETEG00000012540	-	52	83.663	ENSPTIG00000018781	AFF3	68	83.663	Panthera_tigris_altaica
ENSETEG00000012540	-	78	84.049	ENSPTRG00000012281	AFF3	82	83.663	Pan_troglodytes
ENSETEG00000012540	-	78	83.416	ENSPANG00000018693	AFF3	82	83.416	Papio_anubis
ENSETEG00000012540	-	70	72.886	ENSPSIG00000006520	-	81	72.886	Pelodiscus_sinensis
ENSETEG00000012540	-	73	80.494	ENSPEMG00000014802	Aff3	80	80.494	Peromyscus_maniculatus_bairdii
ENSETEG00000012540	-	78	83.911	ENSPPYG00000012096	AFF3	79	83.911	Pongo_abelii
ENSETEG00000012540	-	54	97.436	ENSPCAG00000010889	AFF3	60	97.436	Procavia_capensis
ENSETEG00000012540	-	83	82.921	ENSPCOG00000016986	AFF3	82	82.921	Propithecus_coquereli
ENSETEG00000012540	-	83	80.198	ENSPVAG00000006595	AFF3	82	80.198	Pteropus_vampyrus
ENSETEG00000012540	-	53	62.121	ENSPNAG00000005945	aff2	53	65.038	Pygocentrus_nattereri
ENSETEG00000012540	-	78	80.247	ENSRNOG00000018830	Aff3	79	80.247	Rattus_norvegicus
ENSETEG00000012540	-	73	83.663	ENSRBIG00000029993	AFF3	79	83.663	Rhinopithecus_bieti
ENSETEG00000012540	-	78	83.663	ENSRROG00000033773	AFF3	82	83.663	Rhinopithecus_roxellana
ENSETEG00000012540	-	83	83.168	ENSSBOG00000026667	AFF3	83	83.168	Saimiri_boliviensis_boliviensis
ENSETEG00000012540	-	54	60.069	ENSSHAG00000009556	AFF2	85	33.993	Sarcophilus_harrisii
ENSETEG00000012540	-	57	91.667	ENSSARG00000001324	-	58	91.667	Sorex_araneus
ENSETEG00000012540	-	67	100.000	ENSTBEG00000005434	AFF3	67	100.000	Tupaia_belangeri
ENSETEG00000012540	-	78	85.065	ENSTTRG00000014061	AFF3	84	75.990	Tursiops_truncatus
ENSETEG00000012540	-	78	83.663	ENSVVUG00000028696	AFF3	79	83.663	Vulpes_vulpes
ENSETEG00000012540	-	54	63.838	ENSXETG00000019630	aff2	54	62.731	Xenopus_tropicalis