EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000012830 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 24473 bases
Position: chrGeneScaffold_6511:4113-28585
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000010404	KH_1	PF00013.29	1.9e-07	1	1
ENSETEP00000010404	zf-CCHC	PF00098.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000012830	SF1-201	2145	-	ENSETEP00000010404	715 (aa)	-	UPI0000E4265A

Gene Model

Click here to download ENSETEG00000012830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000012830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000012830	SF1	74	90.807	ENSAMEG00000017828	SF1	82	91.887	Ailuropoda_melanoleuca
ENSETEG00000012830	SF1	51	75.275	ENSACIG00000016514	sf1	61	72.277	Amphilophus_citrinellus
ENSETEG00000012830	SF1	82	78.974	ENSANAG00000022607	-	92	80.360	Aotus_nancymaae
ENSETEG00000012830	SF1	82	92.137	ENSANAG00000026664	-	92	92.308	Aotus_nancymaae
ENSETEG00000012830	SF1	51	76.776	ENSACLG00000007633	sf1	61	74.257	Astatotilapia_calliptera
ENSETEG00000012830	SF1	51	77.748	ENSAMXG00000003630	sf1	50	73.153	Astyanax_mexicanus
ENSETEG00000012830	SF1	82	91.453	ENSBTAG00000001035	SF1	92	92.479	Bos_taurus
ENSETEG00000012830	SF1	82	91.453	ENSCJAG00000002780	SF1	92	92.479	Callithrix_jacchus
ENSETEG00000012830	SF1	82	91.453	ENSCAFG00000014239	SF1	87	92.252	Canis_familiaris
ENSETEG00000012830	SF1	82	91.453	ENSCAFG00020014381	SF1	92	92.479	Canis_lupus_dingo
ENSETEG00000012830	SF1	82	91.453	ENSCHIG00000025867	SF1	95	91.313	Capra_hircus
ENSETEG00000012830	SF1	57	88.206	ENSCAPG00000010762	SF1	73	89.681	Cavia_aperea
ENSETEG00000012830	SF1	82	91.453	ENSCPOG00000012290	SF1	96	91.313	Cavia_porcellus
ENSETEG00000012830	SF1	82	91.453	ENSCCAG00000037881	SF1	93	89.394	Cebus_capucinus
ENSETEG00000012830	SF1	78	79.323	ENSCCAG00000023781	-	92	79.279	Cebus_capucinus
ENSETEG00000012830	SF1	82	91.453	ENSCATG00000011564	SF1	92	92.479	Cercocebus_atys
ENSETEG00000012830	SF1	72	91.313	ENSCSAG00000007258	SF1	95	91.313	Chlorocebus_sabaeus
ENSETEG00000012830	SF1	54	81.748	ENSCHOG00000006008	SF1	73	83.290	Choloepus_hoffmanni
ENSETEG00000012830	SF1	72	79.264	ENSCPBG00000023763	SF1	66	78.723	Chrysemys_picta_bellii
ENSETEG00000012830	SF1	82	91.453	ENSCANG00000042201	SF1	92	92.479	Colobus_angolensis_palliatus
ENSETEG00000012830	SF1	82	90.940	ENSCGRG00001003677	Sf1	92	91.966	Cricetulus_griseus_chok1gshd
ENSETEG00000012830	SF1	73	89.714	ENSCGRG00000001708	Sf1	97	89.714	Cricetulus_griseus_crigri
ENSETEG00000012830	SF1	55	72.634	ENSCSEG00000014375	sf1	57	70.531	Cynoglossus_semilaevis
ENSETEG00000012830	SF1	51	77.174	ENSCVAG00000001670	sf1	63	73.710	Cyprinodon_variegatus
ENSETEG00000012830	SF1	72	91.313	ENSDNOG00000001282	SF1	95	91.313	Dasypus_novemcinctus
ENSETEG00000012830	SF1	82	91.453	ENSDORG00000016334	Sf1	92	92.479	Dipodomys_ordii
ENSETEG00000012830	SF1	72	90.927	ENSEASG00005018272	SF1	95	90.927	Equus_asinus_asinus
ENSETEG00000012830	SF1	72	91.120	ENSECAG00000024544	SF1	95	91.120	Equus_caballus
ENSETEG00000012830	SF1	51	87.637	ENSEEUG00000001058	SF1	93	88.736	Erinaceus_europaeus
ENSETEG00000012830	SF1	82	91.453	ENSFCAG00000012231	SF1	87	92.252	Felis_catus
ENSETEG00000012830	SF1	80	88.522	ENSFDAG00000009833	SF1	89	88.522	Fukomys_damarensis
ENSETEG00000012830	SF1	51	76.965	ENSGAFG00000019284	sf1	76	73.236	Gambusia_affinis
ENSETEG00000012830	SF1	52	73.797	ENSGACG00000000826	sf1	66	70.324	Gasterosteus_aculeatus
ENSETEG00000012830	SF1	63	80.795	ENSGAGG00000021691	SF1	72	78.723	Gopherus_agassizii
ENSETEG00000012830	SF1	51	75.881	ENSHBUG00000011598	sf1	59	72.705	Haplochromis_burtoni
ENSETEG00000012830	SF1	82	91.453	ENSHGLG00000009541	SF1	87	92.252	Heterocephalus_glaber_female
ENSETEG00000012830	SF1	69	72.299	ENSHGLG00100008255	-	92	78.065	Heterocephalus_glaber_male
ENSETEG00000012830	SF1	62	86.130	ENSHGLG00100013879	-	73	89.681	Heterocephalus_glaber_male
ENSETEG00000012830	SF1	61	79.493	ENSHGLG00100008076	-	87	80.093	Heterocephalus_glaber_male
ENSETEG00000012830	SF1	52	74.599	ENSHCOG00000011388	sf1	58	71.182	Hippocampus_comes
ENSETEG00000012830	SF1	82	91.453	ENSSTOG00000009790	-	93	92.479	Ictidomys_tridecemlineatus
ENSETEG00000012830	SF1	64	75.219	ENSSTOG00000024353	-	72	75.921	Ictidomys_tridecemlineatus
ENSETEG00000012830	SF1	82	91.282	ENSJJAG00000011788	Sf1	92	92.308	Jaculus_jaculus
ENSETEG00000012830	SF1	52	74.868	ENSKMAG00000005854	sf1	61	71.429	Kryptolebias_marmoratus
ENSETEG00000012830	SF1	51	75.067	ENSLBEG00000019836	sf1	63	71.913	Labrus_bergylta
ENSETEG00000012830	SF1	57	71.429	ENSLACG00000018493	SF1	73	71.149	Latimeria_chalumnae
ENSETEG00000012830	SF1	77	90.991	ENSLAFG00000007201	SF1	86	92.072	Loxodonta_africana
ENSETEG00000012830	SF1	82	91.453	ENSMFAG00000033122	SF1	92	92.479	Macaca_fascicularis
ENSETEG00000012830	SF1	82	91.453	ENSMMUG00000022606	SF1	99	89.136	Macaca_mulatta
ENSETEG00000012830	SF1	82	91.453	ENSMNEG00000037901	SF1	92	92.479	Macaca_nemestrina
ENSETEG00000012830	SF1	82	91.453	ENSMLEG00000040706	SF1	89	92.479	Mandrillus_leucophaeus
ENSETEG00000012830	SF1	51	75.339	ENSMAMG00000001780	sf1	58	72.222	Mastacembelus_armatus
ENSETEG00000012830	SF1	51	75.881	ENSMZEG00005009196	sf1	59	72.705	Maylandia_zebra
ENSETEG00000012830	SF1	82	90.940	ENSMAUG00000014064	Sf1	87	91.712	Mesocricetus_auratus
ENSETEG00000012830	SF1	77	91.171	ENSMICG00000001202	SF1	93	89.169	Microcebus_murinus
ENSETEG00000012830	SF1	82	91.282	ENSMOCG00000022038	Sf1	87	91.892	Microtus_ochrogaster
ENSETEG00000012830	SF1	51	74.176	ENSMMOG00000020474	sf1	59	71.216	Mola_mola
ENSETEG00000012830	SF1	57	87.500	ENSMODG00000029407	SF1	88	88.943	Monodelphis_domestica
ENSETEG00000012830	SF1	51	75.068	ENSMALG00000020521	sf1	67	72.277	Monopterus_albus
ENSETEG00000012830	SF1	82	90.769	MGP_CAROLIEiJ_G0022607	Sf1	100	98.502	Mus_caroli
ENSETEG00000012830	SF1	82	90.769	ENSMUSG00000024949	Sf1	100	98.502	Mus_musculus
ENSETEG00000012830	SF1	82	90.769	MGP_PahariEiJ_G0014101	Sf1	100	98.502	Mus_pahari
ENSETEG00000012830	SF1	82	90.769	MGP_SPRETEiJ_G0023518	Sf1	100	98.502	Mus_spretus
ENSETEG00000012830	SF1	82	91.282	ENSMPUG00000012684	SF1	92	92.308	Mustela_putorius_furo
ENSETEG00000012830	SF1	62	84.529	ENSMLUG00000029800	-	76	86.005	Myotis_lucifugus
ENSETEG00000012830	SF1	82	91.282	ENSMLUG00000015217	-	92	92.308	Myotis_lucifugus
ENSETEG00000012830	SF1	82	91.282	ENSNGAG00000005550	Sf1	87	92.072	Nannospalax_galili
ENSETEG00000012830	SF1	51	76.776	ENSNBRG00000017606	sf1	60	74.257	Neolamprologus_brichardi
ENSETEG00000012830	SF1	82	91.282	ENSNLEG00000005236	-	92	92.308	Nomascus_leucogenys
ENSETEG00000012830	SF1	72	86.940	ENSMEUG00000013424	SF1	96	89.412	Notamacropus_eugenii
ENSETEG00000012830	SF1	66	89.053	ENSOPRG00000005008	SF1	96	90.698	Ochotona_princeps
ENSETEG00000012830	SF1	80	86.261	ENSODEG00000006102	-	88	86.261	Octodon_degus
ENSETEG00000012830	SF1	51	75.871	ENSONIG00000015728	sf1	59	72.947	Oreochromis_niloticus
ENSETEG00000012830	SF1	56	80.244	ENSOANG00000002909	SF1	99	80.244	Ornithorhynchus_anatinus
ENSETEG00000012830	SF1	82	91.453	ENSOCUG00000026486	SF1	88	92.252	Oryctolagus_cuniculus
ENSETEG00000012830	SF1	53	74.536	ENSORLG00000011853	sf1	58	70.803	Oryzias_latipes
ENSETEG00000012830	SF1	51	74.799	ENSOMEG00000005210	sf1	59	71.845	Oryzias_melastigma
ENSETEG00000012830	SF1	77	91.171	ENSOGAG00000016196	SF1	87	92.252	Otolemur_garnettii
ENSETEG00000012830	SF1	74	84.973	ENSOARG00000009166	SF1	80	90.570	Ovis_aries
ENSETEG00000012830	SF1	80	91.579	ENSPPAG00000002799	-	93	92.456	Pan_paniscus
ENSETEG00000012830	SF1	82	91.453	ENSPPRG00000013566	SF1	93	92.456	Panthera_pardus
ENSETEG00000012830	SF1	57	88.206	ENSPTIG00000016141	SF1	73	89.681	Panthera_tigris_altaica
ENSETEG00000012830	SF1	82	91.453	ENSPTRG00000003846	SF1	95	89.681	Pan_troglodytes
ENSETEG00000012830	SF1	77	90.357	ENSPANG00000020754	SF1	95	91.313	Papio_anubis
ENSETEG00000012830	SF1	82	90.940	ENSPEMG00000010463	Sf1	87	91.712	Peromyscus_maniculatus_bairdii
ENSETEG00000012830	SF1	82	88.889	ENSPCIG00000018173	SF1	92	90.598	Phascolarctos_cinereus
ENSETEG00000012830	SF1	51	76.902	ENSPFOG00000013683	sf1	66	73.710	Poecilia_formosa
ENSETEG00000012830	SF1	51	75.871	ENSPLAG00000018076	sf1	61	72.115	Poecilia_latipinna
ENSETEG00000012830	SF1	51	75.871	ENSPMEG00000005726	sf1	62	72.356	Poecilia_mexicana
ENSETEG00000012830	SF1	51	75.603	ENSPREG00000004155	sf1	59	72.115	Poecilia_reticulata
ENSETEG00000012830	SF1	82	91.453	ENSPPYG00000003098	-	98	91.489	Pongo_abelii
ENSETEG00000012830	SF1	73	89.905	ENSPCAG00000013631	SF1	78	89.905	Procavia_capensis
ENSETEG00000012830	SF1	77	91.171	ENSPCOG00000027546	SF1	93	89.169	Propithecus_coquereli
ENSETEG00000012830	SF1	73	90.286	ENSPVAG00000016938	SF1	79	90.286	Pteropus_vampyrus
ENSETEG00000012830	SF1	51	75.881	ENSPNYG00000004673	sf1	59	72.705	Pundamilia_nyererei
ENSETEG00000012830	SF1	51	77.628	ENSPNAG00000013072	sf1	59	74.447	Pygocentrus_nattereri
ENSETEG00000012830	SF1	82	90.769	ENSRNOG00000021085	Sf1	92	91.795	Rattus_norvegicus
ENSETEG00000012830	SF1	82	88.034	ENSRBIG00000042818	SF1	91	88.034	Rhinopithecus_bieti
ENSETEG00000012830	SF1	73	88.381	ENSRROG00000045655	SF1	96	91.252	Rhinopithecus_roxellana
ENSETEG00000012830	SF1	77	74.955	ENSSBOG00000022267	-	97	75.309	Saimiri_boliviensis_boliviensis
ENSETEG00000012830	SF1	58	82.898	ENSSHAG00000006841	SF1	77	82.898	Sarcophilus_harrisii
ENSETEG00000012830	SF1	55	73.028	ENSSFOG00015021978	sf1	55	71.535	Scleropages_formosus
ENSETEG00000012830	SF1	57	70.803	ENSSMAG00000007549	sf1	62	70.476	Scophthalmus_maximus
ENSETEG00000012830	SF1	72	80.271	ENSSARG00000008180	SF1	100	84.139	Sorex_araneus
ENSETEG00000012830	SF1	70	75.479	ENSSPUG00000012907	SF1	76	77.391	Sphenodon_punctatus
ENSETEG00000012830	SF1	51	74.797	ENSSPAG00000019060	sf1	58	71.014	Stegastes_partitus
ENSETEG00000012830	SF1	82	91.453	ENSSSCG00000013021	SF1	95	91.313	Sus_scrofa
ENSETEG00000012830	SF1	73	55.660	ENSTNIG00000004820	sf1	77	62.260	Tetraodon_nigroviridis
ENSETEG00000012830	SF1	73	98.529	ENSTBEG00000013133	SF1	77	98.529	Tupaia_belangeri
ENSETEG00000012830	SF1	72	86.100	ENSTTRG00000008857	SF1	96	87.209	Tursiops_truncatus
ENSETEG00000012830	SF1	67	88.750	ENSUAMG00000011977	SF1	92	88.750	Ursus_americanus
ENSETEG00000012830	SF1	64	89.278	ENSUMAG00000007268	SF1	88	90.570	Ursus_maritimus
ENSETEG00000012830	SF1	50	98.790	ENSVPAG00000011912	SF1	66	98.790	Vicugna_pacos
ENSETEG00000012830	SF1	72	91.313	ENSVVUG00000028585	SF1	95	91.313	Vulpes_vulpes
ENSETEG00000012830	SF1	82	64.274	ENSXETG00000008434	sf1	67	74.328	Xenopus_tropicalis
ENSETEG00000012830	SF1	51	76.776	ENSXCOG00000003704	sf1	75	73.827	Xiphophorus_couchianus
ENSETEG00000012830	SF1	51	75.668	ENSXMAG00000007822	sf1	61	72.596	Xiphophorus_maculatus