EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000013953 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 6855 bases
Position: chrGeneScaffold_8348:6950-13804
Accession: 101641570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000011322	PseudoU_synth_2	PF00849.22	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000013953	RPUSD4-201	1110	XM_004714189	ENSETEP00000011322	370 (aa)	XP_004714246	UPI0000E43072

Gene Model

Click here to download ENSETEG00000013953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000013953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000013953	RPUSD4	98	77.778	ENSG00000165526	RPUSD4	98	77.778	Homo_sapiens
ENSETEG00000013953	RPUSD4	94	50.276	ENSAPOG00000011024	rpusd4	91	50.276	Acanthochromis_polyacanthus
ENSETEG00000013953	RPUSD4	82	76.056	ENSAMEG00000005953	-	98	76.056	Ailuropoda_melanoleuca
ENSETEG00000013953	RPUSD4	98	80.108	ENSAMEG00000000127	-	99	80.108	Ailuropoda_melanoleuca
ENSETEG00000013953	RPUSD4	86	50.464	ENSACIG00000003533	rpusd4	96	50.307	Amphilophus_citrinellus
ENSETEG00000013953	RPUSD4	91	50.581	ENSAOCG00000015409	rpusd4	83	51.796	Amphiprion_ocellaris
ENSETEG00000013953	RPUSD4	91	50.872	ENSAPEG00000018935	rpusd4	83	51.632	Amphiprion_percula
ENSETEG00000013953	RPUSD4	88	51.964	ENSATEG00000008059	rpusd4	81	51.964	Anabas_testudineus
ENSETEG00000013953	RPUSD4	74	60.573	ENSAPLG00000013250	RPUSD4	99	59.322	Anas_platyrhynchos
ENSETEG00000013953	RPUSD4	97	59.290	ENSACAG00000000189	RPUSD4	100	59.290	Anolis_carolinensis
ENSETEG00000013953	RPUSD4	98	77.236	ENSANAG00000024050	RPUSD4	99	77.236	Aotus_nancymaae
ENSETEG00000013953	RPUSD4	86	51.988	ENSACLG00000020996	rpusd4	84	51.988	Astatotilapia_calliptera
ENSETEG00000013953	RPUSD4	88	52.522	ENSAMXG00000031479	rpusd4	95	52.522	Astyanax_mexicanus
ENSETEG00000013953	RPUSD4	98	76.359	ENSBTAG00000020900	RPUSD4	98	76.359	Bos_taurus
ENSETEG00000013953	RPUSD4	99	78.016	ENSCJAG00000042850	RPUSD4	94	78.016	Callithrix_jacchus
ENSETEG00000013953	RPUSD4	99	79.467	ENSCAFG00000010488	RPUSD4	99	79.733	Canis_familiaris
ENSETEG00000013953	RPUSD4	99	79.467	ENSCAFG00020010621	RPUSD4	99	79.733	Canis_lupus_dingo
ENSETEG00000013953	RPUSD4	98	76.944	ENSCHIG00000009975	RPUSD4	99	76.944	Capra_hircus
ENSETEG00000013953	RPUSD4	98	80.707	ENSTSYG00000008456	RPUSD4	98	80.707	Carlito_syrichta
ENSETEG00000013953	RPUSD4	69	76.378	ENSCAPG00000006040	RPUSD4	97	76.378	Cavia_aperea
ENSETEG00000013953	RPUSD4	99	77.358	ENSCPOG00000014971	RPUSD4	98	77.358	Cavia_porcellus
ENSETEG00000013953	RPUSD4	97	79.508	ENSCCAG00000027838	RPUSD4	98	79.508	Cebus_capucinus
ENSETEG00000013953	RPUSD4	99	78.342	ENSCATG00000041570	RPUSD4	99	78.342	Cercocebus_atys
ENSETEG00000013953	RPUSD4	99	79.893	ENSCLAG00000016553	RPUSD4	98	79.893	Chinchilla_lanigera
ENSETEG00000013953	RPUSD4	99	77.540	ENSCSAG00000002274	RPUSD4	99	77.867	Chlorocebus_sabaeus
ENSETEG00000013953	RPUSD4	75	83.688	ENSCHOG00000010249	RPUSD4	99	83.688	Choloepus_hoffmanni
ENSETEG00000013953	RPUSD4	76	67.133	ENSCPBG00000011175	RPUSD4	99	67.133	Chrysemys_picta_bellii
ENSETEG00000013953	RPUSD4	72	42.238	ENSCSAVG00000000872	-	54	42.238	Ciona_savignyi
ENSETEG00000013953	RPUSD4	98	76.819	ENSCANG00000039684	RPUSD4	98	76.819	Colobus_angolensis_palliatus
ENSETEG00000013953	RPUSD4	97	80.055	ENSCGRG00001024141	Rpusd4	97	80.055	Cricetulus_griseus_chok1gshd
ENSETEG00000013953	RPUSD4	97	80.055	ENSCGRG00000014415	Rpusd4	97	80.055	Cricetulus_griseus_crigri
ENSETEG00000013953	RPUSD4	89	51.032	ENSCVAG00000000392	rpusd4	95	51.032	Cyprinodon_variegatus
ENSETEG00000013953	RPUSD4	89	50.737	ENSCVAG00000008761	rpusd4	86	50.737	Cyprinodon_variegatus
ENSETEG00000013953	RPUSD4	86	52.000	ENSDARG00000012674	rpusd4	91	52.308	Danio_rerio
ENSETEG00000013953	RPUSD4	99	78.016	ENSDNOG00000020026	RPUSD4	99	78.016	Dasypus_novemcinctus
ENSETEG00000013953	RPUSD4	98	80.978	ENSDORG00000016717	Rpusd4	98	80.978	Dipodomys_ordii
ENSETEG00000013953	RPUSD4	99	83.155	ENSEASG00005022982	RPUSD4	99	83.155	Equus_asinus_asinus
ENSETEG00000013953	RPUSD4	99	82.888	ENSECAG00000000557	RPUSD4	99	82.888	Equus_caballus
ENSETEG00000013953	RPUSD4	80	81.720	ENSEEUG00000014036	RPUSD4	81	81.720	Erinaceus_europaeus
ENSETEG00000013953	RPUSD4	91	54.062	ENSELUG00000008075	rpusd4	93	54.062	Esox_lucius
ENSETEG00000013953	RPUSD4	99	80.481	ENSFCAG00000029789	RPUSD4	99	80.749	Felis_catus
ENSETEG00000013953	RPUSD4	88	58.133	ENSFALG00000005171	RPUSD4	98	58.133	Ficedula_albicollis
ENSETEG00000013953	RPUSD4	98	79.292	ENSFDAG00000014307	RPUSD4	98	79.292	Fukomys_damarensis
ENSETEG00000013953	RPUSD4	86	52.147	ENSFHEG00000004329	rpusd4	84	52.147	Fundulus_heteroclitus
ENSETEG00000013953	RPUSD4	86	50.617	ENSGMOG00000017726	rpusd4	96	50.617	Gadus_morhua
ENSETEG00000013953	RPUSD4	96	55.738	ENSGALG00000024326	RPUSD4	99	56.486	Gallus_gallus
ENSETEG00000013953	RPUSD4	89	48.406	ENSGAFG00000021559	rpusd4	87	48.406	Gambusia_affinis
ENSETEG00000013953	RPUSD4	87	50.298	ENSGACG00000001657	rpusd4	99	50.595	Gasterosteus_aculeatus
ENSETEG00000013953	RPUSD4	92	62.248	ENSGAGG00000000132	RPUSD4	96	62.248	Gopherus_agassizii
ENSETEG00000013953	RPUSD4	98	77.507	ENSGGOG00000016494	RPUSD4	98	77.507	Gorilla_gorilla
ENSETEG00000013953	RPUSD4	86	51.988	ENSHBUG00000022838	rpusd4	84	51.988	Haplochromis_burtoni
ENSETEG00000013953	RPUSD4	98	79.292	ENSHGLG00000002285	RPUSD4	97	79.292	Heterocephalus_glaber_female
ENSETEG00000013953	RPUSD4	98	79.292	ENSHGLG00100006385	RPUSD4	97	79.292	Heterocephalus_glaber_male
ENSETEG00000013953	RPUSD4	94	48.760	ENSHCOG00000006612	rpusd4	92	48.626	Hippocampus_comes
ENSETEG00000013953	RPUSD4	87	54.878	ENSIPUG00000023879	rusd4	85	54.878	Ictalurus_punctatus
ENSETEG00000013953	RPUSD4	97	80.716	ENSSTOG00000025280	RPUSD4	100	80.716	Ictidomys_tridecemlineatus
ENSETEG00000013953	RPUSD4	98	81.522	ENSJJAG00000018673	Rpusd4	99	81.522	Jaculus_jaculus
ENSETEG00000013953	RPUSD4	89	53.529	ENSKMAG00000021805	rpusd4	88	53.529	Kryptolebias_marmoratus
ENSETEG00000013953	RPUSD4	86	50.915	ENSLBEG00000020394	rpusd4	91	50.915	Labrus_bergylta
ENSETEG00000013953	RPUSD4	86	62.422	ENSLACG00000011028	RPUSD4	85	61.194	Latimeria_chalumnae
ENSETEG00000013953	RPUSD4	86	49.074	ENSLOCG00000003124	rpusd4	86	48.765	Lepisosteus_oculatus
ENSETEG00000013953	RPUSD4	99	82.306	ENSLAFG00000005211	RPUSD4	99	82.306	Loxodonta_africana
ENSETEG00000013953	RPUSD4	99	78.075	ENSMFAG00000039513	RPUSD4	99	78.075	Macaca_fascicularis
ENSETEG00000013953	RPUSD4	99	77.807	ENSMMUG00000007933	RPUSD4	99	77.807	Macaca_mulatta
ENSETEG00000013953	RPUSD4	99	77.807	ENSMNEG00000027414	RPUSD4	99	77.807	Macaca_nemestrina
ENSETEG00000013953	RPUSD4	99	77.540	ENSMLEG00000042461	RPUSD4	99	77.540	Mandrillus_leucophaeus
ENSETEG00000013953	RPUSD4	93	47.514	ENSMAMG00000023839	rpusd4	93	47.514	Mastacembelus_armatus
ENSETEG00000013953	RPUSD4	86	51.988	ENSMZEG00005011999	rpusd4	84	51.988	Maylandia_zebra
ENSETEG00000013953	RPUSD4	74	61.372	ENSMGAG00000000840	RPUSD4	99	58.567	Meleagris_gallopavo
ENSETEG00000013953	RPUSD4	99	76.533	ENSMAUG00000010280	Rpusd4	99	76.533	Mesocricetus_auratus
ENSETEG00000013953	RPUSD4	99	80.749	ENSMICG00000015979	RPUSD4	99	80.749	Microcebus_murinus
ENSETEG00000013953	RPUSD4	97	74.863	ENSMOCG00000000661	Rpusd4	97	74.863	Microtus_ochrogaster
ENSETEG00000013953	RPUSD4	83	53.205	ENSMMOG00000021731	rpusd4	93	53.205	Mola_mola
ENSETEG00000013953	RPUSD4	86	74.534	ENSMODG00000004521	RPUSD4	83	74.534	Monodelphis_domestica
ENSETEG00000013953	RPUSD4	81	52.117	ENSMALG00000005839	rpusd4	98	50.309	Monopterus_albus
ENSETEG00000013953	RPUSD4	99	78.133	MGP_CAROLIEiJ_G0031954	Rpusd4	99	78.133	Mus_caroli
ENSETEG00000013953	RPUSD4	99	77.333	ENSMUSG00000032044	Rpusd4	99	77.333	Mus_musculus
ENSETEG00000013953	RPUSD4	99	78.249	MGP_PahariEiJ_G0014819	Rpusd4	99	78.249	Mus_pahari
ENSETEG00000013953	RPUSD4	99	77.867	MGP_SPRETEiJ_G0033078	Rpusd4	99	77.867	Mus_spretus
ENSETEG00000013953	RPUSD4	98	78.552	ENSMPUG00000006608	RPUSD4	99	78.552	Mustela_putorius_furo
ENSETEG00000013953	RPUSD4	91	83.235	ENSMLUG00000017328	-	96	80.220	Myotis_lucifugus
ENSETEG00000013953	RPUSD4	67	85.542	ENSMLUG00000029348	-	98	85.542	Myotis_lucifugus
ENSETEG00000013953	RPUSD4	100	77.573	ENSNGAG00000020847	Rpusd4	100	77.573	Nannospalax_galili
ENSETEG00000013953	RPUSD4	86	52.294	ENSNBRG00000005207	rpusd4	95	52.294	Neolamprologus_brichardi
ENSETEG00000013953	RPUSD4	98	76.965	ENSNLEG00000007465	RPUSD4	98	76.965	Nomascus_leucogenys
ENSETEG00000013953	RPUSD4	96	70.556	ENSMEUG00000004370	RPUSD4	97	70.556	Notamacropus_eugenii
ENSETEG00000013953	RPUSD4	69	56.154	ENSOPRG00000013141	-	98	56.154	Ochotona_princeps
ENSETEG00000013953	RPUSD4	99	78.552	ENSODEG00000004577	RPUSD4	98	78.552	Octodon_degus
ENSETEG00000013953	RPUSD4	92	50.712	ENSONIG00000018879	rpusd4	95	50.712	Oreochromis_niloticus
ENSETEG00000013953	RPUSD4	78	69.388	ENSOANG00000007247	RPUSD4	98	67.974	Ornithorhynchus_anatinus
ENSETEG00000013953	RPUSD4	98	80.488	ENSOCUG00000017039	RPUSD4	98	80.488	Oryctolagus_cuniculus
ENSETEG00000013953	RPUSD4	86	50.765	ENSORLG00000002750	rpusd4	90	50.765	Oryzias_latipes
ENSETEG00000013953	RPUSD4	96	47.849	ENSORLG00020002044	rpusd4	92	47.849	Oryzias_latipes_hni
ENSETEG00000013953	RPUSD4	92	49.157	ENSORLG00015020034	rpusd4	88	49.157	Oryzias_latipes_hsok
ENSETEG00000013953	RPUSD4	89	51.335	ENSOMEG00000004861	rpusd4	83	51.335	Oryzias_melastigma
ENSETEG00000013953	RPUSD4	98	77.027	ENSOGAG00000008922	RPUSD4	98	77.027	Otolemur_garnettii
ENSETEG00000013953	RPUSD4	96	77.624	ENSOARG00000012238	RPUSD4	96	77.624	Ovis_aries
ENSETEG00000013953	RPUSD4	98	78.049	ENSPPAG00000042883	RPUSD4	91	78.049	Pan_paniscus
ENSETEG00000013953	RPUSD4	99	80.481	ENSPPRG00000003081	RPUSD4	99	80.481	Panthera_pardus
ENSETEG00000013953	RPUSD4	99	80.481	ENSPTIG00000012059	RPUSD4	99	80.481	Panthera_tigris_altaica
ENSETEG00000013953	RPUSD4	98	77.778	ENSPTRG00000004454	RPUSD4	98	77.778	Pan_troglodytes
ENSETEG00000013953	RPUSD4	99	78.075	ENSPANG00000015040	RPUSD4	99	78.075	Papio_anubis
ENSETEG00000013953	RPUSD4	88	57.530	ENSPKIG00000023986	rpusd4	85	57.530	Paramormyrops_kingsleyae
ENSETEG00000013953	RPUSD4	80	65.000	ENSPSIG00000014268	RPUSD4	95	65.000	Pelodiscus_sinensis
ENSETEG00000013953	RPUSD4	85	49.226	ENSPMGG00000002806	rpusd4	90	49.221	Periophthalmus_magnuspinnatus
ENSETEG00000013953	RPUSD4	98	71.196	ENSPEMG00000000278	Rpusd4	97	71.196	Peromyscus_maniculatus_bairdii
ENSETEG00000013953	RPUSD4	83	43.567	ENSPMAG00000008183	rpusd4	99	42.398	Petromyzon_marinus
ENSETEG00000013953	RPUSD4	94	72.805	ENSPCIG00000010212	RPUSD4	97	72.805	Phascolarctos_cinereus
ENSETEG00000013953	RPUSD4	89	50.144	ENSPFOG00000019030	rpusd4	90	50.144	Poecilia_formosa
ENSETEG00000013953	RPUSD4	89	51.020	ENSPLAG00000016848	rpusd4	87	50.725	Poecilia_latipinna
ENSETEG00000013953	RPUSD4	89	49.854	ENSPMEG00000017534	rpusd4	87	49.565	Poecilia_mexicana
ENSETEG00000013953	RPUSD4	86	50.453	ENSPREG00000005689	rpusd4	85	50.453	Poecilia_reticulata
ENSETEG00000013953	RPUSD4	98	79.133	ENSPPYG00000004043	RPUSD4	98	79.133	Pongo_abelii
ENSETEG00000013953	RPUSD4	79	80.769	ENSPCAG00000000753	RPUSD4	81	80.769	Procavia_capensis
ENSETEG00000013953	RPUSD4	98	75.472	ENSPCOG00000020694	RPUSD4	100	75.472	Propithecus_coquereli
ENSETEG00000013953	RPUSD4	99	82.527	ENSPVAG00000000988	RPUSD4	99	82.527	Pteropus_vampyrus
ENSETEG00000013953	RPUSD4	86	51.070	ENSPNYG00000009652	rpusd4	84	51.070	Pundamilia_nyererei
ENSETEG00000013953	RPUSD4	96	51.524	ENSPNAG00000012264	rpusd4	95	51.524	Pygocentrus_nattereri
ENSETEG00000013953	RPUSD4	99	77.600	ENSRNOG00000011567	Rpusd4	99	77.600	Rattus_norvegicus
ENSETEG00000013953	RPUSD4	96	78.670	ENSRBIG00000034842	RPUSD4	98	77.446	Rhinopithecus_bieti
ENSETEG00000013953	RPUSD4	96	78.670	ENSRROG00000039753	RPUSD4	98	77.446	Rhinopithecus_roxellana
ENSETEG00000013953	RPUSD4	98	78.862	ENSSBOG00000030413	RPUSD4	99	78.862	Saimiri_boliviensis_boliviensis
ENSETEG00000013953	RPUSD4	81	75.748	ENSSHAG00000008304	RPUSD4	99	75.748	Sarcophilus_harrisii
ENSETEG00000013953	RPUSD4	89	55.917	ENSSFOG00015006203	rpusd4	92	56.305	Scleropages_formosus
ENSETEG00000013953	RPUSD4	90	51.765	ENSSMAG00000020978	rpusd4	88	51.765	Scophthalmus_maximus
ENSETEG00000013953	RPUSD4	92	48.563	ENSSDUG00000013399	rpusd4	90	48.563	Seriola_dumerili
ENSETEG00000013953	RPUSD4	84	50.949	ENSSLDG00000023507	rpusd4	83	50.949	Seriola_lalandi_dorsalis
ENSETEG00000013953	RPUSD4	90	62.463	ENSSPUG00000001401	RPUSD4	93	63.050	Sphenodon_punctatus
ENSETEG00000013953	RPUSD4	96	49.863	ENSSPAG00000012163	rpusd4	92	50.000	Stegastes_partitus
ENSETEG00000013953	RPUSD4	99	80.645	ENSSSCG00000015233	RPUSD4	99	80.645	Sus_scrofa
ENSETEG00000013953	RPUSD4	80	60.667	ENSTGUG00000000773	RPUSD4	100	60.667	Taeniopygia_guttata
ENSETEG00000013953	RPUSD4	87	52.134	ENSTRUG00000012283	rpusd4	84	51.524	Takifugu_rubripes
ENSETEG00000013953	RPUSD4	87	51.212	ENSTNIG00000014676	rpusd4	84	51.212	Tetraodon_nigroviridis
ENSETEG00000013953	RPUSD4	99	79.570	ENSTTRG00000001555	RPUSD4	99	79.570	Tursiops_truncatus
ENSETEG00000013953	RPUSD4	98	80.108	ENSUMAG00000002219	RPUSD4	99	80.108	Ursus_maritimus
ENSETEG00000013953	RPUSD4	70	81.818	ENSVPAG00000001066	RPUSD4	100	81.818	Vicugna_pacos
ENSETEG00000013953	RPUSD4	99	79.200	ENSVVUG00000020101	RPUSD4	99	79.467	Vulpes_vulpes
ENSETEG00000013953	RPUSD4	89	50.146	ENSXCOG00000004676	rpusd4	89	49.708	Xiphophorus_couchianus
ENSETEG00000013953	RPUSD4	89	50.146	ENSXMAG00000023351	rpusd4	87	50.146	Xiphophorus_maculatus