EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000014658 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 154698 bases
Position: chrGeneScaffold_1118:14388-169085
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000011883	Ago_hook	PF10427.9	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000014661	TNRC6A-201	5709	-	ENSETEP00000011883	1902 (aa)	-	UPI0000E43BD8

Gene Model

Click here to download ENSETEG00000014658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000014658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000014658	TNRC6A	75	40.816	ENSETEG00000006570	TNRC6B	77	41.071
ENSETEG00000014658	TNRC6A	62	44.638	ENSETEG00000005527	TNRC6C	82	44.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000014658	TNRC6A	99	85.371	ENSG00000090905	TNRC6A	94	97.351	Homo_sapiens
ENSETEG00000014658	TNRC6A	99	85.722	ENSAMEG00000009333	TNRC6A	99	85.714	Ailuropoda_melanoleuca
ENSETEG00000014658	TNRC6A	99	74.175	ENSAPLG00000009978	TNRC6A	100	73.756	Anas_platyrhynchos
ENSETEG00000014658	TNRC6A	99	85.385	ENSANAG00000025252	TNRC6A	98	85.437	Aotus_nancymaae
ENSETEG00000014658	TNRC6A	92	50.733	ENSAMXG00000019919	tnrc6a	99	50.353	Astyanax_mexicanus
ENSETEG00000014658	TNRC6A	99	85.037	ENSBTAG00000017999	TNRC6A	99	85.090	Bos_taurus
ENSETEG00000014658	TNRC6A	99	85.000	ENSCJAG00000020677	TNRC6A	98	85.000	Callithrix_jacchus
ENSETEG00000014658	TNRC6A	99	85.497	ENSCAFG00000017531	TNRC6A	99	84.712	Canis_familiaris
ENSETEG00000014658	TNRC6A	99	83.846	ENSCAFG00020021160	TNRC6A	99	84.313	Canis_lupus_dingo
ENSETEG00000014658	TNRC6A	99	84.349	ENSCHIG00000019448	TNRC6A	99	84.255	Capra_hircus
ENSETEG00000014658	TNRC6A	99	85.759	ENSTSYG00000012711	TNRC6A	99	85.714	Carlito_syrichta
ENSETEG00000014658	TNRC6A	99	84.716	ENSCPOG00000036684	TNRC6A	98	84.664	Cavia_porcellus
ENSETEG00000014658	TNRC6A	99	85.400	ENSCCAG00000033664	TNRC6A	99	85.243	Cebus_capucinus
ENSETEG00000014658	TNRC6A	99	84.279	ENSCATG00000019284	TNRC6A	98	84.331	Cercocebus_atys
ENSETEG00000014658	TNRC6A	99	79.895	ENSCLAG00000010217	TNRC6A	97	80.052	Chinchilla_lanigera
ENSETEG00000014658	TNRC6A	99	85.460	ENSCSAG00000006561	TNRC6A	98	85.513	Chlorocebus_sabaeus
ENSETEG00000014658	TNRC6A	89	94.017	ENSCHOG00000009374	TNRC6A	87	94.017	Choloepus_hoffmanni
ENSETEG00000014658	TNRC6A	92	72.993	ENSCPBG00000001881	TNRC6A	99	72.993	Chrysemys_picta_bellii
ENSETEG00000014658	TNRC6A	99	85.602	ENSCANG00000041549	TNRC6A	98	85.654	Colobus_angolensis_palliatus
ENSETEG00000014658	TNRC6A	99	83.954	ENSCGRG00001015021	Tnrc6a	99	84.050	Cricetulus_griseus_chok1gshd
ENSETEG00000014658	TNRC6A	99	82.545	ENSCGRG00000013351	Tnrc6a	97	82.702	Cricetulus_griseus_crigri
ENSETEG00000014658	TNRC6A	92	50.736	ENSDARG00000079688	tnrc6a	99	50.873	Danio_rerio
ENSETEG00000014658	TNRC6A	99	84.224	ENSDNOG00000013989	TNRC6A	99	84.172	Dasypus_novemcinctus
ENSETEG00000014658	TNRC6A	99	85.767	ENSEASG00005017693	TNRC6A	99	85.684	Equus_asinus_asinus
ENSETEG00000014658	TNRC6A	99	87.223	ENSECAG00000025056	TNRC6A	99	87.123	Equus_caballus
ENSETEG00000014658	TNRC6A	99	81.234	ENSEEUG00000004530	TNRC6A	99	81.234	Erinaceus_europaeus
ENSETEG00000014658	TNRC6A	99	84.523	ENSFCAG00000025236	TNRC6A	99	84.523	Felis_catus
ENSETEG00000014658	TNRC6A	99	71.954	ENSFALG00000003757	TNRC6A	97	72.095	Ficedula_albicollis
ENSETEG00000014658	TNRC6A	92	73.864	ENSGALG00000006068	TNRC6A	99	73.920	Gallus_gallus
ENSETEG00000014658	TNRC6A	92	72.539	ENSGAGG00000023209	TNRC6A	99	72.539	Gopherus_agassizii
ENSETEG00000014658	TNRC6A	99	85.371	ENSGGOG00000005137	TNRC6A	99	85.110	Gorilla_gorilla
ENSETEG00000014658	TNRC6A	98	82.859	ENSHGLG00000012474	-	97	82.806	Heterocephalus_glaber_female
ENSETEG00000014658	TNRC6A	95	66.795	ENSHGLG00000007368	-	93	66.685	Heterocephalus_glaber_female
ENSETEG00000014658	TNRC6A	98	82.434	ENSHGLG00100012496	-	97	82.381	Heterocephalus_glaber_male
ENSETEG00000014658	TNRC6A	99	84.559	ENSSTOG00000023394	TNRC6A	96	84.559	Ictidomys_tridecemlineatus
ENSETEG00000014658	TNRC6A	99	62.967	ENSLACG00000006277	TNRC6A	100	63.226	Latimeria_chalumnae
ENSETEG00000014658	TNRC6A	98	79.506	ENSLOCG00000005517	tnrc6a	88	79.506	Lepisosteus_oculatus
ENSETEG00000014658	TNRC6A	99	84.934	ENSLAFG00000004209	TNRC6A	99	84.979	Loxodonta_africana
ENSETEG00000014658	TNRC6A	99	84.183	ENSMFAG00000003824	TNRC6A	99	84.183	Macaca_fascicularis
ENSETEG00000014658	TNRC6A	99	85.445	ENSMMUG00000020428	TNRC6A	98	85.497	Macaca_mulatta
ENSETEG00000014658	TNRC6A	99	85.156	ENSMNEG00000034854	TNRC6A	98	85.156	Macaca_nemestrina
ENSETEG00000014658	TNRC6A	99	83.757	ENSMLEG00000042737	TNRC6A	97	83.601	Mandrillus_leucophaeus
ENSETEG00000014658	TNRC6A	99	72.251	ENSMGAG00000006455	TNRC6A	94	74.216	Meleagris_gallopavo
ENSETEG00000014658	TNRC6A	99	83.202	ENSMAUG00000012750	Tnrc6a	97	83.202	Mesocricetus_auratus
ENSETEG00000014658	TNRC6A	99	86.311	ENSMICG00000030685	TNRC6A	99	86.050	Microcebus_murinus
ENSETEG00000014658	TNRC6A	99	83.456	ENSMOCG00000000152	Tnrc6a	97	83.403	Microtus_ochrogaster
ENSETEG00000014658	TNRC6A	99	74.103	ENSMODG00000016348	TNRC6A	96	74.205	Monodelphis_domestica
ENSETEG00000014658	TNRC6A	99	82.195	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	81.701	Mus_caroli
ENSETEG00000014658	TNRC6A	99	82.721	ENSMUSG00000052707	Tnrc6a	99	82.059	Mus_musculus
ENSETEG00000014658	TNRC6A	99	83.150	MGP_PahariEiJ_G0013635	Tnrc6a	100	82.487	Mus_pahari
ENSETEG00000014658	TNRC6A	99	83.456	MGP_SPRETEiJ_G0031539	Tnrc6a	100	82.059	Mus_spretus
ENSETEG00000014658	TNRC6A	99	76.356	ENSMPUG00000012324	TNRC6A	100	76.251	Mustela_putorius_furo
ENSETEG00000014658	TNRC6A	99	83.131	ENSMLUG00000002701	TNRC6A	100	83.079	Myotis_lucifugus
ENSETEG00000014658	TNRC6A	99	84.514	ENSNGAG00000020702	Tnrc6a	98	84.462	Nannospalax_galili
ENSETEG00000014658	TNRC6A	99	82.817	ENSNLEG00000011851	TNRC6A	98	82.712	Nomascus_leucogenys
ENSETEG00000014658	TNRC6A	76	80.583	ENSMEUG00000015959	-	74	80.583	Notamacropus_eugenii
ENSETEG00000014658	TNRC6A	94	92.164	ENSOPRG00000005819	TNRC6A	93	92.164	Ochotona_princeps
ENSETEG00000014658	TNRC6A	98	79.167	ENSODEG00000012802	TNRC6A	97	78.903	Octodon_degus
ENSETEG00000014658	TNRC6A	89	73.986	ENSOANG00000007672	TNRC6A	99	73.921	Ornithorhynchus_anatinus
ENSETEG00000014658	TNRC6A	99	82.464	ENSOCUG00000004325	TNRC6A	100	82.412	Oryctolagus_cuniculus
ENSETEG00000014658	TNRC6A	99	86.149	ENSOGAG00000006666	TNRC6A	98	86.149	Otolemur_garnettii
ENSETEG00000014658	TNRC6A	99	84.310	ENSOARG00000017950	TNRC6A	98	84.419	Ovis_aries
ENSETEG00000014658	TNRC6A	99	85.149	ENSPPAG00000028379	TNRC6A	99	85.096	Pan_paniscus
ENSETEG00000014658	TNRC6A	99	84.523	ENSPPRG00000005861	TNRC6A	98	84.523	Panthera_pardus
ENSETEG00000014658	TNRC6A	99	83.386	ENSPTIG00000006346	TNRC6A	98	83.438	Panthera_tigris_altaica
ENSETEG00000014658	TNRC6A	99	84.896	ENSPTRG00000007898	TNRC6A	99	84.948	Pan_troglodytes
ENSETEG00000014658	TNRC6A	99	82.994	ENSPANG00000018523	TNRC6A	99	82.169	Papio_anubis
ENSETEG00000014658	TNRC6A	86	83.212	ENSPKIG00000012859	tnrc6a	93	83.212	Paramormyrops_kingsleyae
ENSETEG00000014658	TNRC6A	78	67.605	ENSPSIG00000003965	TNRC6A	100	67.605	Pelodiscus_sinensis
ENSETEG00000014658	TNRC6A	99	83.613	ENSPEMG00000016318	Tnrc6a	98	83.561	Peromyscus_maniculatus_bairdii
ENSETEG00000014658	TNRC6A	99	75.578	ENSPCIG00000012106	TNRC6A	100	75.578	Phascolarctos_cinereus
ENSETEG00000014658	TNRC6A	99	84.708	ENSPPYG00000007202	TNRC6A	98	84.760	Pongo_abelii
ENSETEG00000014658	TNRC6A	89	100.000	ENSPCAG00000008260	TNRC6A	87	100.000	Procavia_capensis
ENSETEG00000014658	TNRC6A	99	86.252	ENSPCOG00000010134	TNRC6A	97	86.252	Propithecus_coquereli
ENSETEG00000014658	TNRC6A	89	65.556	ENSPVAG00000012066	TNRC6A	97	65.760	Pteropus_vampyrus
ENSETEG00000014658	TNRC6A	99	83.359	ENSRNOG00000024737	Tnrc6a	98	83.525	Rattus_norvegicus
ENSETEG00000014658	TNRC6A	99	85.497	ENSRBIG00000014222	TNRC6A	99	85.550	Rhinopithecus_bieti
ENSETEG00000014658	TNRC6A	99	85.729	ENSRROG00000032360	TNRC6A	98	85.729	Rhinopithecus_roxellana
ENSETEG00000014658	TNRC6A	99	84.777	ENSSBOG00000036197	TNRC6A	99	85.445	Saimiri_boliviensis_boliviensis
ENSETEG00000014658	TNRC6A	92	74.432	ENSSHAG00000008811	TNRC6A	99	75.197	Sarcophilus_harrisii
ENSETEG00000014658	TNRC6A	90	78.765	ENSSFOG00015008920	tnrc6a	93	78.765	Scleropages_formosus
ENSETEG00000014658	TNRC6A	74	82.065	ENSSARG00000002479	TNRC6A	89	82.428	Sorex_araneus
ENSETEG00000014658	TNRC6A	92	69.843	ENSSPUG00000010525	TNRC6A	100	69.955	Sphenodon_punctatus
ENSETEG00000014658	TNRC6A	99	84.969	ENSSSCG00000038870	TNRC6A	99	86.262	Sus_scrofa
ENSETEG00000014658	TNRC6A	99	72.161	ENSTGUG00000006142	TNRC6A	97	71.900	Taeniopygia_guttata
ENSETEG00000014658	TNRC6A	99	87.774	ENSTBEG00000014965	TNRC6A	99	87.768	Tupaia_belangeri
ENSETEG00000014658	TNRC6A	94	90.035	ENSTTRG00000002008	TNRC6A	90	88.967	Tursiops_truncatus
ENSETEG00000014658	TNRC6A	80	83.495	ENSUAMG00000006656	-	93	83.495	Ursus_americanus
ENSETEG00000014658	TNRC6A	99	85.609	ENSUMAG00000008274	TNRC6A	99	86.759	Ursus_maritimus
ENSETEG00000014658	TNRC6A	56	79.291	ENSVPAG00000010764	-	55	79.291	Vicugna_pacos
ENSETEG00000014658	TNRC6A	99	85.497	ENSVVUG00000005380	TNRC6A	99	85.550	Vulpes_vulpes
ENSETEG00000014658	TNRC6A	95	59.752	ENSXETG00000030437	TNRC6A	99	59.968	Xenopus_tropicalis