EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000015563 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 2709 bases
Position: chrscaffold_287220:8936-11644
Accession: 101639640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000012618	RNA_ligase	PF09414.10	7.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000015562	LIG4-201	2709	XM_004704298	ENSETEP00000012618	902 (aa)	XP_004704355	UPI0000E4002D

Gene Model

Click here to download ENSETEG00000015563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000015563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000015563	LIG4	100	84.812	ENSG00000174405	LIG4	100	84.024	Homo_sapiens
ENSETEG00000015563	LIG4	100	63.344	ENSAPOG00000000866	lig4	98	63.234	Acanthochromis_polyacanthus
ENSETEG00000015563	LIG4	100	83.925	ENSAMEG00000019685	LIG4	98	83.592	Ailuropoda_melanoleuca
ENSETEG00000015563	LIG4	99	64.151	ENSACIG00000018309	lig4	98	64.040	Amphilophus_citrinellus
ENSETEG00000015563	LIG4	100	63.455	ENSAOCG00000011768	lig4	98	63.344	Amphiprion_ocellaris
ENSETEG00000015563	LIG4	100	63.566	ENSAPEG00000017815	lig4	98	63.455	Amphiprion_percula
ENSETEG00000015563	LIG4	100	63.747	ENSATEG00000005583	lig4	98	63.415	Anabas_testudineus
ENSETEG00000015563	LIG4	98	72.304	ENSAPLG00000001673	LIG4	99	71.964	Anas_platyrhynchos
ENSETEG00000015563	LIG4	100	72.949	ENSACAG00000014566	LIG4	99	72.616	Anolis_carolinensis
ENSETEG00000015563	LIG4	100	84.146	ENSANAG00000012446	LIG4	99	83.814	Aotus_nancymaae
ENSETEG00000015563	LIG4	99	63.485	ENSACLG00000027051	lig4	98	63.263	Astatotilapia_calliptera
ENSETEG00000015563	LIG4	100	63.193	ENSAMXG00000008192	lig4	93	62.639	Astyanax_mexicanus
ENSETEG00000015563	LIG4	100	83.481	ENSBTAG00000015868	LIG4	99	83.149	Bos_taurus
ENSETEG00000015563	LIG4	100	83.481	ENSCJAG00000014689	LIG4	99	83.149	Callithrix_jacchus
ENSETEG00000015563	LIG4	100	84.479	ENSCAFG00000006031	LIG4	99	84.146	Canis_familiaris
ENSETEG00000015563	LIG4	100	84.479	ENSCAFG00020021230	LIG4	99	84.146	Canis_lupus_dingo
ENSETEG00000015563	LIG4	100	83.481	ENSCHIG00000001019	LIG4	99	83.149	Capra_hircus
ENSETEG00000015563	LIG4	100	82.816	ENSCAPG00000006284	LIG4	99	82.483	Cavia_aperea
ENSETEG00000015563	LIG4	100	82.705	ENSCPOG00000014266	LIG4	99	82.373	Cavia_porcellus
ENSETEG00000015563	LIG4	100	83.370	ENSCCAG00000019971	LIG4	99	83.038	Cebus_capucinus
ENSETEG00000015563	LIG4	100	84.812	ENSCATG00000021075	LIG4	99	84.479	Cercocebus_atys
ENSETEG00000015563	LIG4	100	83.703	ENSCLAG00000003376	LIG4	99	83.370	Chinchilla_lanigera
ENSETEG00000015563	LIG4	100	84.922	ENSCSAG00000000211	LIG4	99	84.590	Chlorocebus_sabaeus
ENSETEG00000015563	LIG4	100	75.996	ENSCPBG00000023291	LIG4	98	75.664	Chrysemys_picta_bellii
ENSETEG00000015563	LIG4	69	44.019	ENSCING00000009536	-	93	44.517	Ciona_intestinalis
ENSETEG00000015563	LIG4	84	43.758	ENSCSAVG00000010336	-	98	43.570	Ciona_savignyi
ENSETEG00000015563	LIG4	100	84.701	ENSCANG00000005805	LIG4	99	84.368	Colobus_angolensis_palliatus
ENSETEG00000015563	LIG4	100	80.509	ENSCGRG00001012072	Lig4	99	80.399	Cricetulus_griseus_chok1gshd
ENSETEG00000015563	LIG4	100	80.509	ENSCGRG00000013417	Lig4	99	80.399	Cricetulus_griseus_crigri
ENSETEG00000015563	LIG4	97	63.595	ENSCSEG00000013905	lig4	95	63.367	Cynoglossus_semilaevis
ENSETEG00000015563	LIG4	100	63.636	ENSCVAG00000007896	lig4	98	63.415	Cyprinodon_variegatus
ENSETEG00000015563	LIG4	100	62.901	ENSDARG00000060620	lig4	98	62.348	Danio_rerio
ENSETEG00000015563	LIG4	100	84.164	ENSDNOG00000000513	LIG4	99	84.164	Dasypus_novemcinctus
ENSETEG00000015563	LIG4	100	82.373	ENSDORG00000027303	Lig4	99	82.040	Dipodomys_ordii
ENSETEG00000015563	LIG4	89	30.697	FBgn0030506	Lig4	90	30.697	Drosophila_melanogaster
ENSETEG00000015563	LIG4	99	43.763	ENSEBUG00000014243	lig4	98	43.326	Eptatretus_burgeri
ENSETEG00000015563	LIG4	100	85.920	ENSEASG00005022073	LIG4	99	85.588	Equus_asinus_asinus
ENSETEG00000015563	LIG4	100	85.477	ENSECAG00000003257	LIG4	99	85.144	Equus_caballus
ENSETEG00000015563	LIG4	100	64.341	ENSELUG00000006787	lig4	98	64.784	Esox_lucius
ENSETEG00000015563	LIG4	100	83.814	ENSFCAG00000031985	LIG4	99	83.703	Felis_catus
ENSETEG00000015563	LIG4	89	73.342	ENSFALG00000004214	LIG4	96	72.966	Ficedula_albicollis
ENSETEG00000015563	LIG4	100	82.816	ENSFDAG00000008973	LIG4	99	82.483	Fukomys_damarensis
ENSETEG00000015563	LIG4	100	63.193	ENSFHEG00000007398	lig4	89	63.082	Fundulus_heteroclitus
ENSETEG00000015563	LIG4	86	61.647	ENSGMOG00000012843	lig4	99	61.647	Gadus_morhua
ENSETEG00000015563	LIG4	100	72.395	ENSGALG00000016854	LIG4	98	72.173	Gallus_gallus
ENSETEG00000015563	LIG4	99	63.293	ENSGAFG00000019779	lig4	94	63.525	Gambusia_affinis
ENSETEG00000015563	LIG4	100	62.306	ENSGACG00000014135	lig4	98	61.973	Gasterosteus_aculeatus
ENSETEG00000015563	LIG4	100	84.701	ENSGGOG00000027771	LIG4	99	84.368	Gorilla_gorilla
ENSETEG00000015563	LIG4	99	63.374	ENSHBUG00000006245	lig4	98	63.152	Haplochromis_burtoni
ENSETEG00000015563	LIG4	100	83.370	ENSHGLG00000000718	LIG4	99	83.038	Heterocephalus_glaber_female
ENSETEG00000015563	LIG4	100	83.370	ENSHGLG00100003265	LIG4	99	83.038	Heterocephalus_glaber_male
ENSETEG00000015563	LIG4	100	63.193	ENSHCOG00000012010	lig4	98	62.971	Hippocampus_comes
ENSETEG00000015563	LIG4	100	63.677	ENSIPUG00000013748	lig4	98	63.234	Ictalurus_punctatus
ENSETEG00000015563	LIG4	100	83.592	ENSSTOG00000024303	LIG4	99	83.370	Ictidomys_tridecemlineatus
ENSETEG00000015563	LIG4	100	80.820	ENSJJAG00000006750	Lig4	99	80.820	Jaculus_jaculus
ENSETEG00000015563	LIG4	100	63.636	ENSKMAG00000001149	lig4	98	63.193	Kryptolebias_marmoratus
ENSETEG00000015563	LIG4	92	63.145	ENSLBEG00000014578	lig4	100	62.905	Labrus_bergylta
ENSETEG00000015563	LIG4	100	70.067	ENSLACG00000003282	LIG4	98	69.623	Latimeria_chalumnae
ENSETEG00000015563	LIG4	100	68.473	ENSLOCG00000008901	lig4	97	68.252	Lepisosteus_oculatus
ENSETEG00000015563	LIG4	100	86.268	ENSLAFG00000031152	LIG4	99	86.268	Loxodonta_africana
ENSETEG00000015563	LIG4	100	84.812	ENSMFAG00000037235	LIG4	99	84.479	Macaca_fascicularis
ENSETEG00000015563	LIG4	100	84.812	ENSMMUG00000008874	LIG4	99	84.479	Macaca_mulatta
ENSETEG00000015563	LIG4	100	84.812	ENSMNEG00000023575	LIG4	99	84.479	Macaca_nemestrina
ENSETEG00000015563	LIG4	100	85.144	ENSMLEG00000026720	LIG4	99	84.812	Mandrillus_leucophaeus
ENSETEG00000015563	LIG4	100	63.858	ENSMAMG00000008472	lig4	98	63.636	Mastacembelus_armatus
ENSETEG00000015563	LIG4	99	63.485	ENSMZEG00005001855	lig4	98	63.263	Maylandia_zebra
ENSETEG00000015563	LIG4	100	73.171	ENSMGAG00000015532	LIG4	98	72.949	Meleagris_gallopavo
ENSETEG00000015563	LIG4	100	78.492	ENSMOCG00000019000	Lig4	99	78.381	Microtus_ochrogaster
ENSETEG00000015563	LIG4	100	63.193	ENSMMOG00000004390	lig4	98	62.639	Mola_mola
ENSETEG00000015563	LIG4	100	81.506	ENSMODG00000025064	LIG4	99	81.285	Monodelphis_domestica
ENSETEG00000015563	LIG4	100	62.971	ENSMALG00000008555	lig4	98	62.749	Monopterus_albus
ENSETEG00000015563	LIG4	100	81.375	MGP_CAROLIEiJ_G0030809	Lig4	99	81.264	Mus_caroli
ENSETEG00000015563	LIG4	100	81.153	ENSMUSG00000049717	Lig4	99	81.042	Mus_musculus
ENSETEG00000015563	LIG4	100	81.042	MGP_PahariEiJ_G0021270	Lig4	99	80.931	Mus_pahari
ENSETEG00000015563	LIG4	100	81.153	MGP_SPRETEiJ_G0031917	Lig4	99	81.042	Mus_spretus
ENSETEG00000015563	LIG4	100	83.814	ENSMPUG00000018675	LIG4	99	83.481	Mustela_putorius_furo
ENSETEG00000015563	LIG4	100	85.033	ENSMLUG00000001267	LIG4	99	84.701	Myotis_lucifugus
ENSETEG00000015563	LIG4	100	81.596	ENSNGAG00000013258	Lig4	99	81.486	Nannospalax_galili
ENSETEG00000015563	LIG4	99	63.596	ENSNBRG00000021252	lig4	98	63.374	Neolamprologus_brichardi
ENSETEG00000015563	LIG4	100	84.812	ENSNLEG00000007888	LIG4	99	84.479	Nomascus_leucogenys
ENSETEG00000015563	LIG4	100	82.262	ENSOPRG00000005765	LIG4	99	81.929	Ochotona_princeps
ENSETEG00000015563	LIG4	100	81.707	ENSODEG00000019683	LIG4	99	81.486	Octodon_degus
ENSETEG00000015563	LIG4	99	63.707	ENSONIG00000011969	lig4	97	63.596	Oreochromis_niloticus
ENSETEG00000015563	LIG4	100	84.146	ENSOCUG00000015734	LIG4	99	83.814	Oryctolagus_cuniculus
ENSETEG00000015563	LIG4	100	62.680	ENSORLG00000004041	lig4	98	62.680	Oryzias_latipes
ENSETEG00000015563	LIG4	100	63.123	ENSORLG00020019607	lig4	98	63.123	Oryzias_latipes_hni
ENSETEG00000015563	LIG4	100	62.791	ENSORLG00015017754	lig4	98	62.791	Oryzias_latipes_hsok
ENSETEG00000015563	LIG4	75	67.211	ENSOMEG00000003459	lig4	98	66.914	Oryzias_melastigma
ENSETEG00000015563	LIG4	100	84.922	ENSOGAG00000032120	LIG4	98	84.590	Otolemur_garnettii
ENSETEG00000015563	LIG4	83	83.802	ENSOARG00000005590	LIG4	99	83.400	Ovis_aries
ENSETEG00000015563	LIG4	100	84.812	ENSPPAG00000032998	LIG4	99	84.701	Pan_paniscus
ENSETEG00000015563	LIG4	100	84.257	ENSPPRG00000017804	LIG4	99	84.146	Panthera_pardus
ENSETEG00000015563	LIG4	100	84.146	ENSPTIG00000010051	LIG4	99	84.035	Panthera_tigris_altaica
ENSETEG00000015563	LIG4	100	84.701	ENSPTRG00000006025	LIG4	99	84.590	Pan_troglodytes
ENSETEG00000015563	LIG4	100	84.922	ENSPANG00000007562	LIG4	99	84.590	Papio_anubis
ENSETEG00000015563	LIG4	100	64.302	ENSPKIG00000011645	lig4	97	63.747	Paramormyrops_kingsleyae
ENSETEG00000015563	LIG4	100	75.721	ENSPSIG00000001504	LIG4	98	75.388	Pelodiscus_sinensis
ENSETEG00000015563	LIG4	99	61.709	ENSPMGG00000013486	lig4	98	61.462	Periophthalmus_magnuspinnatus
ENSETEG00000015563	LIG4	100	80.399	ENSPEMG00000000076	Lig4	99	80.066	Peromyscus_maniculatus_bairdii
ENSETEG00000015563	LIG4	100	81.063	ENSPCIG00000021882	LIG4	99	80.842	Phascolarctos_cinereus
ENSETEG00000015563	LIG4	99	63.444	ENSPFOG00000000797	lig4	98	63.415	Poecilia_formosa
ENSETEG00000015563	LIG4	99	63.333	ENSPLAG00000001196	lig4	98	63.304	Poecilia_latipinna
ENSETEG00000015563	LIG4	99	63.444	ENSPMEG00000021353	lig4	98	63.525	Poecilia_mexicana
ENSETEG00000015563	LIG4	99	63.556	ENSPREG00000007323	lig4	98	63.566	Poecilia_reticulata
ENSETEG00000015563	LIG4	100	84.812	ENSPPYG00000005540	LIG4	99	84.479	Pongo_abelii
ENSETEG00000015563	LIG4	100	85.477	ENSPVAG00000016403	LIG4	99	85.144	Pteropus_vampyrus
ENSETEG00000015563	LIG4	99	63.374	ENSPNYG00000009660	lig4	98	63.152	Pundamilia_nyererei
ENSETEG00000015563	LIG4	100	63.082	ENSPNAG00000028069	LIG4	99	62.749	Pygocentrus_nattereri
ENSETEG00000015563	LIG4	100	63.082	ENSPNAG00000028056	lig4	99	62.749	Pygocentrus_nattereri
ENSETEG00000015563	LIG4	100	80.044	ENSRNOG00000014605	Lig4	99	79.933	Rattus_norvegicus
ENSETEG00000015563	LIG4	100	83.592	ENSRBIG00000039962	LIG4	99	83.259	Rhinopithecus_bieti
ENSETEG00000015563	LIG4	100	84.701	ENSRROG00000006040	LIG4	99	84.368	Rhinopithecus_roxellana
ENSETEG00000015563	LIG4	100	84.035	ENSSBOG00000019029	LIG4	99	83.703	Saimiri_boliviensis_boliviensis
ENSETEG00000015563	LIG4	100	78.405	ENSSHAG00000009525	LIG4	99	78.405	Sarcophilus_harrisii
ENSETEG00000015563	LIG4	100	64.191	ENSSFOG00015012835	lig4	98	63.636	Scleropages_formosus
ENSETEG00000015563	LIG4	100	61.419	ENSSMAG00000011267	lig4	98	61.197	Scophthalmus_maximus
ENSETEG00000015563	LIG4	100	64.191	ENSSDUG00000010343	lig4	98	63.525	Seriola_dumerili
ENSETEG00000015563	LIG4	100	62.749	ENSSLDG00000003239	lig4	98	62.417	Seriola_lalandi_dorsalis
ENSETEG00000015563	LIG4	100	79.006	ENSSARG00000006573	LIG4	99	78.895	Sorex_araneus
ENSETEG00000015563	LIG4	94	73.728	ENSSPUG00000002444	LIG4	100	73.728	Sphenodon_punctatus
ENSETEG00000015563	LIG4	100	63.636	ENSSPAG00000001609	lig4	98	63.304	Stegastes_partitus
ENSETEG00000015563	LIG4	100	83.149	ENSSSCG00000009540	LIG4	99	83.149	Sus_scrofa
ENSETEG00000015563	LIG4	100	72.062	ENSTGUG00000010795	LIG4	99	71.729	Taeniopygia_guttata
ENSETEG00000015563	LIG4	100	63.415	ENSTRUG00000009984	lig4	98	63.304	Takifugu_rubripes
ENSETEG00000015563	LIG4	100	63.525	ENSTNIG00000010348	lig4	98	63.636	Tetraodon_nigroviridis
ENSETEG00000015563	LIG4	100	84.590	ENSTBEG00000017741	LIG4	99	84.368	Tupaia_belangeri
ENSETEG00000015563	LIG4	100	83.703	ENSTTRG00000012660	LIG4	99	83.370	Tursiops_truncatus
ENSETEG00000015563	LIG4	100	83.592	ENSUAMG00000003773	LIG4	99	83.259	Ursus_americanus
ENSETEG00000015563	LIG4	100	68.514	ENSXETG00000002654	lig4	98	68.182	Xenopus_tropicalis
ENSETEG00000015563	LIG4	99	63.444	ENSXCOG00000017401	lig4	98	63.193	Xiphophorus_couchianus
ENSETEG00000015563	LIG4	99	63.596	ENSXMAG00000015142	lig4	98	63.344	Xiphophorus_maculatus