EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000016307 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 124291 bases
Position: chrGeneScaffold_5049:41-124331
Accession: 101654042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000013228	SRP54	PF00448.22	3e-78	1	1
ENSETEP00000013228	SRP54_N	PF02881.19	4.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000016309	-	1512	XM_004698526	ENSETEP00000013228	503 (aa)	XP_004698583	UPI0000E41D09

Gene Model

Click here to download ENSETEG00000016307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000016307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000016307	-	83	58.134	ENSETEG00000012102	-	99	58.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000016307	-	100	98.810	ENSG00000100883	SRP54	100	99.545	Homo_sapiens
ENSETEG00000016307	-	100	94.643	ENSAPOG00000011314	srp54	100	94.643	Acanthochromis_polyacanthus
ENSETEG00000016307	-	100	98.810	ENSAMEG00000015544	SRP54	100	98.810	Ailuropoda_melanoleuca
ENSETEG00000016307	-	89	93.764	ENSACIG00000022831	srp54	97	93.764	Amphilophus_citrinellus
ENSETEG00000016307	-	100	94.643	ENSAOCG00000019401	srp54	100	94.643	Amphiprion_ocellaris
ENSETEG00000016307	-	100	94.643	ENSAPEG00000001977	srp54	100	95.148	Amphiprion_percula
ENSETEG00000016307	-	100	95.040	ENSATEG00000013877	srp54	100	95.040	Anabas_testudineus
ENSETEG00000016307	-	94	97.468	ENSAPLG00000010125	SRP54	95	97.468	Anas_platyrhynchos
ENSETEG00000016307	-	86	95.161	ENSACAG00000010631	-	100	95.161	Anolis_carolinensis
ENSETEG00000016307	-	100	97.421	ENSACAG00000002103	-	100	97.421	Anolis_carolinensis
ENSETEG00000016307	-	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSETEG00000016307	-	100	98.810	ENSANAG00000022133	SRP54	100	98.810	Aotus_nancymaae
ENSETEG00000016307	-	100	94.841	ENSACLG00000015866	srp54	100	94.841	Astatotilapia_calliptera
ENSETEG00000016307	-	100	94.841	ENSAMXG00000032669	SRP54	100	94.841	Astyanax_mexicanus
ENSETEG00000016307	-	100	98.810	ENSBTAG00000019085	SRP54	100	98.810	Bos_taurus
ENSETEG00000016307	-	98	71.285	WBGene00009012	F21D5.7	100	71.285	Caenorhabditis_elegans
ENSETEG00000016307	-	100	98.810	ENSCJAG00000006581	SRP54	100	98.810	Callithrix_jacchus
ENSETEG00000016307	-	100	98.810	ENSCAFG00000013331	SRP54	100	98.810	Canis_familiaris
ENSETEG00000016307	-	100	98.810	ENSCAFG00020023427	SRP54	100	98.810	Canis_lupus_dingo
ENSETEG00000016307	-	100	98.810	ENSCHIG00000026345	SRP54	100	98.810	Capra_hircus
ENSETEG00000016307	-	94	87.368	ENSTSYG00000035333	-	93	87.368	Carlito_syrichta
ENSETEG00000016307	-	100	98.611	ENSTSYG00000002680	-	100	98.611	Carlito_syrichta
ENSETEG00000016307	-	94	63.061	ENSCAPG00000008780	SRP54	100	63.061	Cavia_aperea
ENSETEG00000016307	-	100	98.413	ENSCPOG00000003691	SRP54	100	98.413	Cavia_porcellus
ENSETEG00000016307	-	83	99.523	ENSCCAG00000024179	SRP54	100	99.523	Cebus_capucinus
ENSETEG00000016307	-	100	98.810	ENSCATG00000034083	SRP54	100	98.810	Cercocebus_atys
ENSETEG00000016307	-	100	98.810	ENSCLAG00000015076	SRP54	100	98.810	Chinchilla_lanigera
ENSETEG00000016307	-	100	98.810	ENSCSAG00000015575	SRP54	100	98.810	Chlorocebus_sabaeus
ENSETEG00000016307	-	95	86.902	ENSCHOG00000008986	SRP54	100	86.902	Choloepus_hoffmanni
ENSETEG00000016307	-	100	98.016	ENSCPBG00000026195	SRP54	100	98.016	Chrysemys_picta_bellii
ENSETEG00000016307	-	100	80.556	ENSCING00000007380	-	100	80.556	Ciona_intestinalis
ENSETEG00000016307	-	100	98.810	ENSCANG00000028532	SRP54	100	98.810	Colobus_angolensis_palliatus
ENSETEG00000016307	-	100	98.810	ENSCGRG00001009525	-	100	98.810	Cricetulus_griseus_chok1gshd
ENSETEG00000016307	-	76	98.442	ENSCGRG00000009453	-	89	98.442	Cricetulus_griseus_crigri
ENSETEG00000016307	-	100	93.849	ENSCSEG00000012392	srp54	100	93.849	Cynoglossus_semilaevis
ENSETEG00000016307	-	100	94.643	ENSCVAG00000010395	srp54	100	94.643	Cyprinodon_variegatus
ENSETEG00000016307	-	100	94.841	ENSDARG00000098367	srp54	100	94.841	Danio_rerio
ENSETEG00000016307	-	100	98.810	ENSDNOG00000032525	SRP54	100	98.810	Dasypus_novemcinctus
ENSETEG00000016307	-	89	84.152	ENSDORG00000005159	-	97	84.152	Dipodomys_ordii
ENSETEG00000016307	-	96	77.526	FBgn0010747	Srp54k	98	77.108	Drosophila_melanogaster
ENSETEG00000016307	-	100	86.706	ENSEBUG00000009437	-	100	86.706	Eptatretus_burgeri
ENSETEG00000016307	-	100	98.810	ENSEASG00005002057	SRP54	100	98.810	Equus_asinus_asinus
ENSETEG00000016307	-	99	98.594	ENSECAG00000018042	SRP54	98	98.594	Equus_caballus
ENSETEG00000016307	-	100	82.143	ENSEEUG00000001511	SRP54	100	82.143	Erinaceus_europaeus
ENSETEG00000016307	-	100	94.048	ENSELUG00000003395	srp54	100	94.048	Esox_lucius
ENSETEG00000016307	-	100	99.008	ENSFCAG00000032033	SRP54	100	99.008	Felis_catus
ENSETEG00000016307	-	100	97.619	ENSFALG00000005995	SRP54	100	97.619	Ficedula_albicollis
ENSETEG00000016307	-	100	98.810	ENSFDAG00000016767	SRP54	100	98.810	Fukomys_damarensis
ENSETEG00000016307	-	100	94.246	ENSFHEG00000004263	srp54	100	94.246	Fundulus_heteroclitus
ENSETEG00000016307	-	95	89.749	ENSGMOG00000011391	srp54	100	89.749	Gadus_morhua
ENSETEG00000016307	-	100	97.619	ENSGALG00000023135	SRP54	100	97.619	Gallus_gallus
ENSETEG00000016307	-	100	94.841	ENSGAFG00000011586	srp54	100	94.841	Gambusia_affinis
ENSETEG00000016307	-	100	94.246	ENSGACG00000004181	srp54	100	94.246	Gasterosteus_aculeatus
ENSETEG00000016307	-	100	98.016	ENSGAGG00000014766	SRP54	100	98.016	Gopherus_agassizii
ENSETEG00000016307	-	100	98.810	ENSGGOG00000002926	SRP54	100	98.810	Gorilla_gorilla
ENSETEG00000016307	-	100	94.841	ENSHBUG00000005678	srp54	100	94.841	Haplochromis_burtoni
ENSETEG00000016307	-	100	98.810	ENSHGLG00000002850	SRP54	100	98.810	Heterocephalus_glaber_female
ENSETEG00000016307	-	100	98.810	ENSHGLG00100005263	SRP54	100	98.810	Heterocephalus_glaber_male
ENSETEG00000016307	-	100	68.119	ENSHGLG00100007281	-	100	68.119	Heterocephalus_glaber_male
ENSETEG00000016307	-	100	93.452	ENSHCOG00000021127	srp54	100	93.452	Hippocampus_comes
ENSETEG00000016307	-	100	94.048	ENSIPUG00000001420	srp54	100	94.048	Ictalurus_punctatus
ENSETEG00000016307	-	100	98.810	ENSSTOG00000016023	SRP54	100	98.810	Ictidomys_tridecemlineatus
ENSETEG00000016307	-	87	76.591	ENSJJAG00000016404	-	100	76.591	Jaculus_jaculus
ENSETEG00000016307	-	100	94.048	ENSJJAG00000013417	-	100	94.048	Jaculus_jaculus
ENSETEG00000016307	-	100	94.246	ENSKMAG00000007707	srp54	100	94.246	Kryptolebias_marmoratus
ENSETEG00000016307	-	100	94.643	ENSLBEG00000018690	srp54	100	94.643	Labrus_bergylta
ENSETEG00000016307	-	100	94.643	ENSLBEG00000021122	srp54	100	94.643	Labrus_bergylta
ENSETEG00000016307	-	100	94.841	ENSLACG00000017890	SRP54	100	94.841	Latimeria_chalumnae
ENSETEG00000016307	-	100	95.635	ENSLOCG00000009440	srp54	100	95.635	Lepisosteus_oculatus
ENSETEG00000016307	-	100	98.810	ENSLAFG00000012007	SRP54	100	98.810	Loxodonta_africana
ENSETEG00000016307	-	100	98.810	ENSMFAG00000044371	SRP54	100	98.810	Macaca_fascicularis
ENSETEG00000016307	-	100	98.810	ENSMMUG00000015073	FAM177A1	100	98.810	Macaca_mulatta
ENSETEG00000016307	-	100	98.810	ENSMNEG00000006947	SRP54	100	98.810	Macaca_nemestrina
ENSETEG00000016307	-	100	98.810	ENSMLEG00000042251	SRP54	100	98.810	Mandrillus_leucophaeus
ENSETEG00000016307	-	100	94.841	ENSMAMG00000004803	srp54	100	94.841	Mastacembelus_armatus
ENSETEG00000016307	-	100	94.841	ENSMZEG00005027528	srp54	100	94.841	Maylandia_zebra
ENSETEG00000016307	-	100	92.885	ENSMGAG00000012481	SRP54	100	92.885	Meleagris_gallopavo
ENSETEG00000016307	-	100	98.611	ENSMAUG00000014447	-	100	98.611	Mesocricetus_auratus
ENSETEG00000016307	-	100	98.810	ENSMICG00000010270	SRP54	100	98.810	Microcebus_murinus
ENSETEG00000016307	-	87	99.318	ENSMOCG00000000948	-	100	99.318	Microtus_ochrogaster
ENSETEG00000016307	-	89	92.841	ENSMMOG00000020303	srp54	98	92.841	Mola_mola
ENSETEG00000016307	-	100	98.611	ENSMODG00000023150	-	100	98.611	Monodelphis_domestica
ENSETEG00000016307	-	100	98.611	ENSMODG00000012925	-	100	98.611	Monodelphis_domestica
ENSETEG00000016307	-	89	93.304	ENSMALG00000009163	srp54	99	93.304	Monopterus_albus
ENSETEG00000016307	-	100	98.611	MGP_CAROLIEiJ_G0017754	-	100	98.611	Mus_caroli
ENSETEG00000016307	-	100	97.817	ENSMUSG00000079108	Srp54c	100	97.817	Mus_musculus
ENSETEG00000016307	-	100	98.611	ENSMUSG00000073079	Srp54a	100	98.611	Mus_musculus
ENSETEG00000016307	-	100	98.611	ENSMUSG00000112449	Srp54b	100	98.611	Mus_musculus
ENSETEG00000016307	-	100	98.611	MGP_PahariEiJ_G0029510	-	100	98.611	Mus_pahari
ENSETEG00000016307	-	100	98.810	ENSMPUG00000016302	SRP54	100	98.810	Mustela_putorius_furo
ENSETEG00000016307	-	100	98.214	ENSMLUG00000008958	SRP54	100	98.214	Myotis_lucifugus
ENSETEG00000016307	-	100	88.889	ENSNGAG00000019806	-	100	88.889	Nannospalax_galili
ENSETEG00000016307	-	87	95.227	ENSNBRG00000006000	srp54	100	95.227	Neolamprologus_brichardi
ENSETEG00000016307	-	100	98.810	ENSNLEG00000003496	SRP54	100	98.810	Nomascus_leucogenys
ENSETEG00000016307	-	67	99.286	ENSMEUG00000000138	-	76	99.286	Notamacropus_eugenii
ENSETEG00000016307	-	57	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSETEG00000016307	-	100	98.810	ENSODEG00000004865	SRP54	100	98.810	Octodon_degus
ENSETEG00000016307	-	100	94.841	ENSONIG00000011768	srp54	100	94.841	Oreochromis_niloticus
ENSETEG00000016307	-	100	98.810	ENSOANG00000014051	SRP54	100	98.810	Ornithorhynchus_anatinus
ENSETEG00000016307	-	100	98.214	ENSOCUG00000007838	SRP54	100	98.214	Oryctolagus_cuniculus
ENSETEG00000016307	-	100	94.643	ENSORLG00000010027	srp54	100	94.643	Oryzias_latipes
ENSETEG00000016307	-	100	94.643	ENSORLG00020001878	srp54	100	94.643	Oryzias_latipes_hni
ENSETEG00000016307	-	100	94.643	ENSORLG00015021866	srp54	100	94.643	Oryzias_latipes_hsok
ENSETEG00000016307	-	100	94.841	ENSOMEG00000020952	srp54	100	94.841	Oryzias_melastigma
ENSETEG00000016307	-	100	98.810	ENSOGAG00000012188	SRP54	100	98.810	Otolemur_garnettii
ENSETEG00000016307	-	100	98.810	ENSOARG00000007160	SRP54	100	98.810	Ovis_aries
ENSETEG00000016307	-	100	98.810	ENSPPAG00000017434	SRP54	100	98.810	Pan_paniscus
ENSETEG00000016307	-	100	98.016	ENSPPRG00000014047	SRP54	100	98.016	Panthera_pardus
ENSETEG00000016307	-	100	99.008	ENSPTIG00000000744	SRP54	96	99.008	Panthera_tigris_altaica
ENSETEG00000016307	-	100	98.810	ENSPTRG00000006259	FAM177A1	100	98.810	Pan_troglodytes
ENSETEG00000016307	-	100	98.810	ENSPANG00000023853	SRP54	100	98.810	Papio_anubis
ENSETEG00000016307	-	100	94.444	ENSPKIG00000001953	srp54	100	94.444	Paramormyrops_kingsleyae
ENSETEG00000016307	-	100	97.817	ENSPSIG00000006476	SRP54	100	97.817	Pelodiscus_sinensis
ENSETEG00000016307	-	91	91.739	ENSPMGG00000004127	srp54	99	91.739	Periophthalmus_magnuspinnatus
ENSETEG00000016307	-	100	85.714	ENSPEMG00000019634	-	100	85.714	Peromyscus_maniculatus_bairdii
ENSETEG00000016307	-	100	87.897	ENSPMAG00000006078	-	100	87.897	Petromyzon_marinus
ENSETEG00000016307	-	100	98.611	ENSPCIG00000016175	SRP54	100	98.611	Phascolarctos_cinereus
ENSETEG00000016307	-	100	94.841	ENSPFOG00000008870	srp54	100	94.841	Poecilia_formosa
ENSETEG00000016307	-	100	94.841	ENSPLAG00000009889	srp54	100	94.841	Poecilia_latipinna
ENSETEG00000016307	-	100	94.841	ENSPMEG00000008601	srp54	100	94.841	Poecilia_mexicana
ENSETEG00000016307	-	100	94.841	ENSPREG00000004505	srp54	100	94.841	Poecilia_reticulata
ENSETEG00000016307	-	100	93.651	ENSPPYG00000005739	SRP54	100	93.651	Pongo_abelii
ENSETEG00000016307	-	100	94.841	ENSPCAG00000006268	SRP54	100	94.841	Procavia_capensis
ENSETEG00000016307	-	100	96.832	ENSPCOG00000022473	SRP54	100	96.832	Propithecus_coquereli
ENSETEG00000016307	-	63	99.103	ENSPVAG00000010056	SRP54	82	99.103	Pteropus_vampyrus
ENSETEG00000016307	-	100	94.841	ENSPNYG00000009717	srp54	100	94.841	Pundamilia_nyererei
ENSETEG00000016307	-	100	94.643	ENSPNAG00000008544	srp54	100	94.643	Pygocentrus_nattereri
ENSETEG00000016307	-	100	98.413	ENSRNOG00000032776	Srp54a	100	98.413	Rattus_norvegicus
ENSETEG00000016307	-	100	98.810	ENSRROG00000041292	SRP54	100	98.810	Rhinopithecus_roxellana
ENSETEG00000016307	-	86	52.608	YPR088C	SRP54	95	47.893	Saccharomyces_cerevisiae
ENSETEG00000016307	-	94	99.578	ENSSBOG00000035145	SRP54	100	99.578	Saimiri_boliviensis_boliviensis
ENSETEG00000016307	-	68	99.417	ENSSHAG00000000671	SRP54	100	99.417	Sarcophilus_harrisii
ENSETEG00000016307	-	100	95.040	ENSSFOG00015013920	srp54	100	95.040	Scleropages_formosus
ENSETEG00000016307	-	100	88.764	ENSSMAG00000002441	srp54	100	88.764	Scophthalmus_maximus
ENSETEG00000016307	-	100	94.841	ENSSDUG00000018586	srp54	100	94.841	Seriola_dumerili
ENSETEG00000016307	-	100	94.643	ENSSLDG00000010476	srp54	100	94.643	Seriola_lalandi_dorsalis
ENSETEG00000016307	-	100	98.810	ENSSARG00000002744	SRP54	100	98.810	Sorex_araneus
ENSETEG00000016307	-	100	98.016	ENSSPUG00000013101	SRP54	100	98.016	Sphenodon_punctatus
ENSETEG00000016307	-	100	94.643	ENSSPAG00000002354	srp54	100	94.643	Stegastes_partitus
ENSETEG00000016307	-	100	98.810	ENSSSCG00000001955	SRP54	100	98.810	Sus_scrofa
ENSETEG00000016307	-	94	97.468	ENSTGUG00000011945	-	95	97.468	Taeniopygia_guttata
ENSETEG00000016307	-	100	94.246	ENSTRUG00000007057	srp54	100	94.246	Takifugu_rubripes
ENSETEG00000016307	-	100	93.849	ENSTNIG00000002589	srp54	100	93.849	Tetraodon_nigroviridis
ENSETEG00000016307	-	89	91.051	ENSTBEG00000011409	SRP54	100	91.051	Tupaia_belangeri
ENSETEG00000016307	-	100	88.889	ENSTTRG00000000928	SRP54	100	88.889	Tursiops_truncatus
ENSETEG00000016307	-	52	98.092	ENSUAMG00000012385	SRP54	100	98.092	Ursus_americanus
ENSETEG00000016307	-	100	98.810	ENSUMAG00000011234	SRP54	100	98.810	Ursus_maritimus
ENSETEG00000016307	-	94	98.523	ENSVPAG00000005668	SRP54	100	98.523	Vicugna_pacos
ENSETEG00000016307	-	100	98.810	ENSVVUG00000019962	SRP54	100	98.810	Vulpes_vulpes
ENSETEG00000016307	-	100	80.980	ENSXETG00000012290	srp54	100	81.055	Xenopus_tropicalis
ENSETEG00000016307	-	88	94.582	ENSXCOG00000004658	srp54	96	94.582	Xiphophorus_couchianus
ENSETEG00000016307	-	100	94.841	ENSXMAG00000018315	srp54	100	94.841	Xiphophorus_maculatus