EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000016371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 3971 bases
Position: chrGeneScaffold_3055:87795-91765
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000013276	zf-C2H2	PF00096.26	3.5e-23	1	4
ENSETEP00000013276	zf-C2H2	PF00096.26	3.5e-23	2	4
ENSETEP00000013276	zf-C2H2	PF00096.26	3.5e-23	3	4
ENSETEP00000013276	zf-C2H2	PF00096.26	3.5e-23	4	4
ENSETEP00000013276	zf-met	PF12874.7	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000016370	-	423	-	ENSETEP00000013276	141 (aa)	-	UPI0000E42F20

Gene Model

Click here to download ENSETEG00000016371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000016371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000016371	-	93	42.017	ENSETEG00000016741	-	65	42.017
ENSETEG00000016371	-	88	40.367	ENSETEG00000020268	PRDM5	56	40.367
ENSETEG00000016371	-	90	40.476	ENSETEG00000006796	-	52	40.476
ENSETEG00000016371	-	96	39.623	ENSETEG00000003195	-	81	39.623
ENSETEG00000016371	-	78	43.243	ENSETEG00000011456	-	61	42.857
ENSETEG00000016371	-	90	38.095	ENSETEG00000014225	-	99	38.095
ENSETEG00000016371	-	94	40.000	ENSETEG00000001475	-	77	40.000
ENSETEG00000016371	-	93	39.623	ENSETEG00000002865	-	78	39.623
ENSETEG00000016371	-	96	40.625	ENSETEG00000020249	-	80	40.625
ENSETEG00000016371	-	87	38.889	ENSETEG00000008973	-	93	40.000
ENSETEG00000016371	-	87	39.048	ENSETEG00000018209	-	60	39.048
ENSETEG00000016371	-	94	44.872	ENSETEG00000008765	-	96	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000016371	-	95	79.104	ENSCAPG00000013078	SNAI2	57	79.104	Cavia_aperea
ENSETEG00000016371	-	79	71.560	ENSCSAVG00000009819	-	56	71.560	Ciona_savignyi
ENSETEG00000016371	-	97	79.562	ENSFALG00000012974	-	57	79.562	Ficedula_albicollis
ENSETEG00000016371	-	96	76.296	ENSLOCG00000004887	SNAI3	79	76.296	Lepisosteus_oculatus
ENSETEG00000016371	-	96	74.815	ENSPSIG00000004262	SNAI3	51	74.815	Pelodiscus_sinensis
ENSETEG00000016371	-	95	80.597	ENSUAMG00000014942	SNAI2	56	80.597	Ursus_americanus