EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000016542 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 129235 bases
Position: chrGeneScaffold_7329:287582-416816
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000013423	MRP-S27	PF10037.9	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000016543	PTCD2-201	1170	-	ENSETEP00000013423	389 (aa)	-	UPI0000E43CD2

Gene Model

Click here to download ENSETEG00000016542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000016542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000016542	PTCD2	99	70.361	ENSG00000049883	PTCD2	99	70.361	Homo_sapiens
ENSETEG00000016542	PTCD2	90	43.840	ENSAPOG00000020682	ptcd2	91	43.840	Acanthochromis_polyacanthus
ENSETEG00000016542	PTCD2	99	69.588	ENSAMEG00000007194	PTCD2	99	69.588	Ailuropoda_melanoleuca
ENSETEG00000016542	PTCD2	89	40.462	ENSACIG00000002053	ptcd2	100	40.462	Amphilophus_citrinellus
ENSETEG00000016542	PTCD2	90	43.266	ENSAOCG00000006616	ptcd2	89	43.266	Amphiprion_ocellaris
ENSETEG00000016542	PTCD2	90	43.266	ENSAPEG00000022926	ptcd2	89	43.266	Amphiprion_percula
ENSETEG00000016542	PTCD2	96	50.269	ENSACAG00000009747	PTCD2	94	50.269	Anolis_carolinensis
ENSETEG00000016542	PTCD2	99	67.784	ENSANAG00000029353	PTCD2	99	67.784	Aotus_nancymaae
ENSETEG00000016542	PTCD2	95	42.359	ENSACLG00000027742	ptcd2	96	42.359	Astatotilapia_calliptera
ENSETEG00000016542	PTCD2	84	42.988	ENSAMXG00000029404	ptcd2	87	42.988	Astyanax_mexicanus
ENSETEG00000016542	PTCD2	99	67.532	ENSBTAG00000014675	PTCD2	100	67.532	Bos_taurus
ENSETEG00000016542	PTCD2	99	67.268	ENSCJAG00000016364	PTCD2	99	67.268	Callithrix_jacchus
ENSETEG00000016542	PTCD2	99	69.430	ENSCAFG00000007982	PTCD2	90	69.430	Canis_familiaris
ENSETEG00000016542	PTCD2	89	70.893	ENSCAFG00020019147	PTCD2	97	70.893	Canis_lupus_dingo
ENSETEG00000016542	PTCD2	99	68.312	ENSCHIG00000017118	PTCD2	100	68.312	Capra_hircus
ENSETEG00000016542	PTCD2	99	62.694	ENSCPOG00000040168	PTCD2	100	62.694	Cavia_porcellus
ENSETEG00000016542	PTCD2	99	67.784	ENSCCAG00000029389	-	99	67.784	Cebus_capucinus
ENSETEG00000016542	PTCD2	82	65.312	ENSCCAG00000021996	-	98	65.312	Cebus_capucinus
ENSETEG00000016542	PTCD2	99	68.490	ENSCATG00000019069	PTCD2	100	68.490	Cercocebus_atys
ENSETEG00000016542	PTCD2	99	64.844	ENSCLAG00000000072	PTCD2	100	64.844	Chinchilla_lanigera
ENSETEG00000016542	PTCD2	99	68.490	ENSCSAG00000015623	PTCD2	100	68.490	Chlorocebus_sabaeus
ENSETEG00000016542	PTCD2	73	73.099	ENSCHOG00000010634	PTCD2	82	73.099	Choloepus_hoffmanni
ENSETEG00000016542	PTCD2	99	49.742	ENSCPBG00000000216	PTCD2	99	49.742	Chrysemys_picta_bellii
ENSETEG00000016542	PTCD2	99	67.268	ENSCANG00000035636	PTCD2	99	67.268	Colobus_angolensis_palliatus
ENSETEG00000016542	PTCD2	99	64.691	ENSCGRG00001015289	Ptcd2	84	64.691	Cricetulus_griseus_chok1gshd
ENSETEG00000016542	PTCD2	99	64.691	ENSCGRG00000006193	Ptcd2	84	64.691	Cricetulus_griseus_crigri
ENSETEG00000016542	PTCD2	90	41.761	ENSCVAG00000001285	ptcd2	90	41.761	Cyprinodon_variegatus
ENSETEG00000016542	PTCD2	90	43.343	ENSDARG00000035391	ptcd2	92	43.343	Danio_rerio
ENSETEG00000016542	PTCD2	99	69.792	ENSDNOG00000008719	PTCD2	100	69.792	Dasypus_novemcinctus
ENSETEG00000016542	PTCD2	99	68.557	ENSDORG00000004921	Ptcd2	100	68.557	Dipodomys_ordii
ENSETEG00000016542	PTCD2	99	70.052	ENSEASG00005018038	PTCD2	100	70.052	Equus_asinus_asinus
ENSETEG00000016542	PTCD2	99	70.130	ENSECAG00000007022	PTCD2	99	70.130	Equus_caballus
ENSETEG00000016542	PTCD2	99	63.660	ENSEEUG00000014031	PTCD2	99	63.660	Erinaceus_europaeus
ENSETEG00000016542	PTCD2	90	45.170	ENSELUG00000003584	ptcd2	91	45.170	Esox_lucius
ENSETEG00000016542	PTCD2	100	63.496	ENSFCAG00000045432	PTCD2	84	63.496	Felis_catus
ENSETEG00000016542	PTCD2	84	46.341	ENSFALG00000010299	PTCD2	99	46.341	Ficedula_albicollis
ENSETEG00000016542	PTCD2	99	64.583	ENSFDAG00000018461	PTCD2	100	64.583	Fukomys_damarensis
ENSETEG00000016542	PTCD2	92	44.847	ENSGMOG00000003637	ptcd2	93	44.847	Gadus_morhua
ENSETEG00000016542	PTCD2	92	46.779	ENSGALG00000038260	PTCD2	93	46.779	Gallus_gallus
ENSETEG00000016542	PTCD2	99	52.835	ENSGAGG00000021952	PTCD2	99	52.835	Gopherus_agassizii
ENSETEG00000016542	PTCD2	99	70.361	ENSGGOG00000010695	PTCD2	99	70.361	Gorilla_gorilla
ENSETEG00000016542	PTCD2	95	42.359	ENSHBUG00000009191	ptcd2	96	42.359	Haplochromis_burtoni
ENSETEG00000016542	PTCD2	94	67.760	ENSHGLG00000001234	PTCD2	94	67.760	Heterocephalus_glaber_female
ENSETEG00000016542	PTCD2	94	67.760	ENSHGLG00100015419	PTCD2	94	67.760	Heterocephalus_glaber_male
ENSETEG00000016542	PTCD2	97	44.764	ENSHCOG00000001703	ptcd2	96	44.764	Hippocampus_comes
ENSETEG00000016542	PTCD2	83	42.991	ENSIPUG00000006080	ptcd2	90	42.075	Ictalurus_punctatus
ENSETEG00000016542	PTCD2	98	68.407	ENSSTOG00000006596	PTCD2	99	68.407	Ictidomys_tridecemlineatus
ENSETEG00000016542	PTCD2	99	66.406	ENSJJAG00000024388	Ptcd2	100	66.406	Jaculus_jaculus
ENSETEG00000016542	PTCD2	91	40.845	ENSKMAG00000009329	ptcd2	92	40.845	Kryptolebias_marmoratus
ENSETEG00000016542	PTCD2	89	43.516	ENSLBEG00000024871	ptcd2	88	43.516	Labrus_bergylta
ENSETEG00000016542	PTCD2	90	49.148	ENSLOCG00000011122	ptcd2	91	49.148	Lepisosteus_oculatus
ENSETEG00000016542	PTCD2	80	72.115	ENSLAFG00000004115	PTCD2	100	72.115	Loxodonta_africana
ENSETEG00000016542	PTCD2	99	67.700	ENSMFAG00000031516	PTCD2	99	67.700	Macaca_fascicularis
ENSETEG00000016542	PTCD2	99	67.448	ENSMNEG00000007537	PTCD2	100	67.448	Macaca_nemestrina
ENSETEG00000016542	PTCD2	99	68.217	ENSMLEG00000031093	PTCD2	99	68.217	Mandrillus_leucophaeus
ENSETEG00000016542	PTCD2	90	46.705	ENSMAMG00000018529	ptcd2	91	46.705	Mastacembelus_armatus
ENSETEG00000016542	PTCD2	95	42.359	ENSMZEG00005003625	ptcd2	96	42.359	Maylandia_zebra
ENSETEG00000016542	PTCD2	90	47.851	ENSMGAG00000005033	PTCD2	100	47.851	Meleagris_gallopavo
ENSETEG00000016542	PTCD2	99	51.302	ENSMAUG00000020253	Ptcd2	100	51.302	Mesocricetus_auratus
ENSETEG00000016542	PTCD2	99	69.091	ENSMICG00000004535	PTCD2	99	69.091	Microcebus_murinus
ENSETEG00000016542	PTCD2	99	64.062	ENSMOCG00000019985	Ptcd2	100	64.062	Microtus_ochrogaster
ENSETEG00000016542	PTCD2	99	53.109	ENSMODG00000001695	PTCD2	100	53.109	Monodelphis_domestica
ENSETEG00000016542	PTCD2	95	43.700	ENSMALG00000022372	ptcd2	97	43.700	Monopterus_albus
ENSETEG00000016542	PTCD2	99	63.802	MGP_CAROLIEiJ_G0018829	Ptcd2	100	63.802	Mus_caroli
ENSETEG00000016542	PTCD2	99	63.542	ENSMUSG00000021650	Ptcd2	100	63.542	Mus_musculus
ENSETEG00000016542	PTCD2	99	65.625	MGP_PahariEiJ_G0015904	Ptcd2	100	65.625	Mus_pahari
ENSETEG00000016542	PTCD2	99	63.802	MGP_SPRETEiJ_G0019711	Ptcd2	100	63.802	Mus_spretus
ENSETEG00000016542	PTCD2	99	69.531	ENSMPUG00000014401	PTCD2	100	69.531	Mustela_putorius_furo
ENSETEG00000016542	PTCD2	100	67.352	ENSMLUG00000007374	PTCD2	100	67.352	Myotis_lucifugus
ENSETEG00000016542	PTCD2	99	64.249	ENSNGAG00000005027	Ptcd2	100	64.249	Nannospalax_galili
ENSETEG00000016542	PTCD2	85	43.202	ENSNBRG00000000092	-	100	43.202	Neolamprologus_brichardi
ENSETEG00000016542	PTCD2	90	43.840	ENSNBRG00000008174	ptcd2	91	43.840	Neolamprologus_brichardi
ENSETEG00000016542	PTCD2	99	68.814	ENSNLEG00000004516	PTCD2	99	68.814	Nomascus_leucogenys
ENSETEG00000016542	PTCD2	99	52.083	ENSMEUG00000014012	-	99	52.344	Notamacropus_eugenii
ENSETEG00000016542	PTCD2	99	63.144	ENSOPRG00000007290	PTCD2	99	63.144	Ochotona_princeps
ENSETEG00000016542	PTCD2	99	67.188	ENSODEG00000016417	PTCD2	100	67.188	Octodon_degus
ENSETEG00000016542	PTCD2	79	43.770	ENSONIG00000011269	ptcd2	91	43.770	Oreochromis_niloticus
ENSETEG00000016542	PTCD2	94	69.315	ENSOCUG00000007970	PTCD2	100	68.750	Oryctolagus_cuniculus
ENSETEG00000016542	PTCD2	95	43.360	ENSORLG00000003851	ptcd2	92	43.360	Oryzias_latipes
ENSETEG00000016542	PTCD2	95	42.818	ENSORLG00020009823	ptcd2	94	42.818	Oryzias_latipes_hni
ENSETEG00000016542	PTCD2	90	43.020	ENSORLG00015016777	ptcd2	99	43.020	Oryzias_latipes_hsok
ENSETEG00000016542	PTCD2	93	42.541	ENSOMEG00000012396	ptcd2	87	42.541	Oryzias_melastigma
ENSETEG00000016542	PTCD2	100	66.067	ENSOGAG00000008390	PTCD2	100	66.067	Otolemur_garnettii
ENSETEG00000016542	PTCD2	100	68.205	ENSOARG00000005087	PTCD2	100	68.205	Ovis_aries
ENSETEG00000016542	PTCD2	99	70.361	ENSPPAG00000028480	PTCD2	99	70.361	Pan_paniscus
ENSETEG00000016542	PTCD2	99	69.845	ENSPTRG00000016968	PTCD2	99	69.845	Pan_troglodytes
ENSETEG00000016542	PTCD2	89	70.520	ENSPANG00000006611	PTCD2	89	70.520	Papio_anubis
ENSETEG00000016542	PTCD2	90	44.663	ENSPKIG00000019896	ptcd2	92	44.663	Paramormyrops_kingsleyae
ENSETEG00000016542	PTCD2	82	55.172	ENSPSIG00000014559	PTCD2	98	55.172	Pelodiscus_sinensis
ENSETEG00000016542	PTCD2	99	65.544	ENSPEMG00000000884	Ptcd2	100	65.544	Peromyscus_maniculatus_bairdii
ENSETEG00000016542	PTCD2	99	54.404	ENSPCIG00000029047	PTCD2	100	54.663	Phascolarctos_cinereus
ENSETEG00000016542	PTCD2	94	39.510	ENSPLAG00000010456	ptcd2	98	39.231	Poecilia_latipinna
ENSETEG00000016542	PTCD2	100	39.487	ENSPREG00000021797	ptcd2	96	39.487	Poecilia_reticulata
ENSETEG00000016542	PTCD2	99	59.948	ENSPPYG00000015543	PTCD2	99	59.948	Pongo_abelii
ENSETEG00000016542	PTCD2	81	58.730	ENSPCAG00000006806	PTCD2	100	58.730	Procavia_capensis
ENSETEG00000016542	PTCD2	100	67.352	ENSPVAG00000010935	PTCD2	100	67.352	Pteropus_vampyrus
ENSETEG00000016542	PTCD2	95	42.627	ENSPNYG00000003122	ptcd2	96	42.627	Pundamilia_nyererei
ENSETEG00000016542	PTCD2	89	45.299	ENSPNAG00000021490	ptcd2	95	44.624	Pygocentrus_nattereri
ENSETEG00000016542	PTCD2	99	65.104	ENSRNOG00000028403	Ptcd2	100	65.104	Rattus_norvegicus
ENSETEG00000016542	PTCD2	99	63.144	ENSRBIG00000032929	PTCD2	99	63.144	Rhinopithecus_bieti
ENSETEG00000016542	PTCD2	99	68.750	ENSRROG00000000080	PTCD2	100	68.750	Rhinopithecus_roxellana
ENSETEG00000016542	PTCD2	99	66.927	ENSSBOG00000018911	PTCD2	100	66.927	Saimiri_boliviensis_boliviensis
ENSETEG00000016542	PTCD2	99	53.608	ENSSHAG00000003833	PTCD2	99	53.608	Sarcophilus_harrisii
ENSETEG00000016542	PTCD2	90	45.170	ENSSFOG00015015415	ptcd2	91	45.170	Scleropages_formosus
ENSETEG00000016542	PTCD2	95	42.667	ENSSMAG00000010350	ptcd2	92	42.667	Scophthalmus_maximus
ENSETEG00000016542	PTCD2	89	45.402	ENSSDUG00000008142	ptcd2	87	45.402	Seriola_dumerili
ENSETEG00000016542	PTCD2	89	45.690	ENSSLDG00000015284	ptcd2	91	45.690	Seriola_lalandi_dorsalis
ENSETEG00000016542	PTCD2	81	71.656	ENSSARG00000004983	PTCD2	100	71.656	Sorex_araneus
ENSETEG00000016542	PTCD2	90	48.433	ENSSPUG00000000176	PTCD2	88	48.433	Sphenodon_punctatus
ENSETEG00000016542	PTCD2	90	42.120	ENSSPAG00000008591	ptcd2	89	42.120	Stegastes_partitus
ENSETEG00000016542	PTCD2	100	70.694	ENSSSCG00000016975	PTCD2	91	70.694	Sus_scrofa
ENSETEG00000016542	PTCD2	89	46.532	ENSTGUG00000005705	PTCD2	99	46.532	Taeniopygia_guttata
ENSETEG00000016542	PTCD2	99	65.464	ENSTBEG00000016559	PTCD2	100	65.296	Tupaia_belangeri
ENSETEG00000016542	PTCD2	100	69.487	ENSTTRG00000011851	PTCD2	100	69.487	Tursiops_truncatus
ENSETEG00000016542	PTCD2	99	69.588	ENSUAMG00000007583	PTCD2	91	69.588	Ursus_americanus
ENSETEG00000016542	PTCD2	99	69.531	ENSUMAG00000007666	PTCD2	100	69.531	Ursus_maritimus
ENSETEG00000016542	PTCD2	100	70.000	ENSVPAG00000009597	PTCD2	100	70.000	Vicugna_pacos
ENSETEG00000016542	PTCD2	99	69.010	ENSVVUG00000007299	-	100	69.010	Vulpes_vulpes
ENSETEG00000016542	PTCD2	90	49.432	ENSXETG00000031652	PTCD2	92	49.432	Xenopus_tropicalis
ENSETEG00000016542	PTCD2	93	40.220	ENSXMAG00000005940	ptcd2	89	39.744	Xiphophorus_maculatus