EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000016790 (Gene tree)
Gene ID: -
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 306181 bases
Position: chrGeneScaffold_2024:109055-415235
Accession: 17809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000013626	EST1	PF10374.9	2.4e-14	1	1
ENSETEP00000013626	EST1_DNA_bind	PF10373.9	7.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000016792	SMG6-201	4248	-	ENSETEP00000013626	1415 (aa)	-	UPI0000E41836

Gene Model

Click here to download ENSETEG00000016790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000016790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000016790	SMG6	93	100.000	ENSG00000070366	SMG6	100	96.377	Homo_sapiens
ENSETEG00000016790	SMG6	59	90.000	ENSAPOG00000019448	smg6	67	90.000	Acanthochromis_polyacanthus
ENSETEG00000016790	SMG6	93	100.000	ENSAMEG00000007632	SMG6	93	100.000	Ailuropoda_melanoleuca
ENSETEG00000016790	SMG6	61	89.744	ENSACIG00000012997	smg6	66	89.744	Amphilophus_citrinellus
ENSETEG00000016790	SMG6	59	90.000	ENSAOCG00000002630	smg6	72	90.000	Amphiprion_ocellaris
ENSETEG00000016790	SMG6	59	90.000	ENSAPEG00000019101	smg6	72	90.000	Amphiprion_percula
ENSETEG00000016790	SMG6	79	90.000	ENSATEG00000006483	smg6	69	90.000	Anabas_testudineus
ENSETEG00000016790	SMG6	82	56.914	ENSACAG00000011783	SMG6	94	57.107	Anolis_carolinensis
ENSETEG00000016790	SMG6	93	100.000	ENSANAG00000035760	SMG6	93	100.000	Aotus_nancymaae
ENSETEG00000016790	SMG6	59	87.500	ENSACLG00000005288	smg6	70	87.500	Astatotilapia_calliptera
ENSETEG00000016790	SMG6	61	90.244	ENSAMXG00000017326	smg6	92	90.244	Astyanax_mexicanus
ENSETEG00000016790	SMG6	93	100.000	ENSBTAG00000000267	SMG6	93	100.000	Bos_taurus
ENSETEG00000016790	SMG6	93	100.000	ENSCJAG00000001820	SMG6	93	100.000	Callithrix_jacchus
ENSETEG00000016790	SMG6	93	100.000	ENSCAFG00000019260	SMG6	93	100.000	Canis_familiaris
ENSETEG00000016790	SMG6	93	100.000	ENSCAFG00020009770	SMG6	93	100.000	Canis_lupus_dingo
ENSETEG00000016790	SMG6	93	100.000	ENSCHIG00000021998	SMG6	93	100.000	Capra_hircus
ENSETEG00000016790	SMG6	93	100.000	ENSTSYG00000003406	SMG6	93	100.000	Carlito_syrichta
ENSETEG00000016790	SMG6	85	98.039	ENSCAPG00000016197	SMG6	88	98.039	Cavia_aperea
ENSETEG00000016790	SMG6	93	97.619	ENSCPOG00000014878	SMG6	98	92.641	Cavia_porcellus
ENSETEG00000016790	SMG6	93	100.000	ENSCCAG00000035801	SMG6	93	100.000	Cebus_capucinus
ENSETEG00000016790	SMG6	93	100.000	ENSCATG00000031956	SMG6	93	100.000	Cercocebus_atys
ENSETEG00000016790	SMG6	93	97.619	ENSCLAG00000006748	SMG6	93	97.619	Chinchilla_lanigera
ENSETEG00000016790	SMG6	93	100.000	ENSCSAG00000013800	SMG6	93	100.000	Chlorocebus_sabaeus
ENSETEG00000016790	SMG6	57	97.015	ENSCHOG00000005024	-	73	97.015	Choloepus_hoffmanni
ENSETEG00000016790	SMG6	93	90.476	ENSCPBG00000020369	SMG6	93	90.476	Chrysemys_picta_bellii
ENSETEG00000016790	SMG6	91	100.000	ENSCANG00000031764	SMG6	93	100.000	Colobus_angolensis_palliatus
ENSETEG00000016790	SMG6	55	85.733	ENSCGRG00001019595	Smg6	100	85.531	Cricetulus_griseus_chok1gshd
ENSETEG00000016790	SMG6	84	100.000	ENSCGRG00000007782	Smg6	87	100.000	Cricetulus_griseus_crigri
ENSETEG00000016790	SMG6	91	87.500	ENSCSEG00000012757	smg6	82	87.500	Cynoglossus_semilaevis
ENSETEG00000016790	SMG6	65	87.500	ENSCVAG00000012789	smg6	67	87.500	Cyprinodon_variegatus
ENSETEG00000016790	SMG6	93	90.244	ENSDARG00000100481	smg6	93	90.244	Danio_rerio
ENSETEG00000016790	SMG6	93	97.619	ENSDNOG00000048283	SMG6	93	97.619	Dasypus_novemcinctus
ENSETEG00000016790	SMG6	93	100.000	ENSDORG00000016614	Smg6	93	100.000	Dipodomys_ordii
ENSETEG00000016790	SMG6	67	78.049	ENSEBUG00000005059	smg6	64	80.000	Eptatretus_burgeri
ENSETEG00000016790	SMG6	93	100.000	ENSEASG00005009318	SMG6	92	100.000	Equus_asinus_asinus
ENSETEG00000016790	SMG6	93	100.000	ENSECAG00000006519	SMG6	92	100.000	Equus_caballus
ENSETEG00000016790	SMG6	93	100.000	ENSEEUG00000003493	SMG6	93	100.000	Erinaceus_europaeus
ENSETEG00000016790	SMG6	64	95.122	ENSELUG00000005934	smg6	64	95.122	Esox_lucius
ENSETEG00000016790	SMG6	93	100.000	ENSFCAG00000028817	SMG6	93	100.000	Felis_catus
ENSETEG00000016790	SMG6	91	90.476	ENSFALG00000006538	SMG6	93	90.476	Ficedula_albicollis
ENSETEG00000016790	SMG6	93	97.619	ENSFDAG00000015106	SMG6	93	97.619	Fukomys_damarensis
ENSETEG00000016790	SMG6	71	85.000	ENSFHEG00000013282	smg6	62	85.000	Fundulus_heteroclitus
ENSETEG00000016790	SMG6	93	90.476	ENSGALG00000003108	SMG6	91	90.476	Gallus_gallus
ENSETEG00000016790	SMG6	71	87.500	ENSGAFG00000000379	smg6	62	87.500	Gambusia_affinis
ENSETEG00000016790	SMG6	83	90.000	ENSGACG00000020521	smg6	92	90.000	Gasterosteus_aculeatus
ENSETEG00000016790	SMG6	91	90.476	ENSGAGG00000025617	SMG6	93	90.476	Gopherus_agassizii
ENSETEG00000016790	SMG6	93	100.000	ENSGGOG00000017156	SMG6	93	100.000	Gorilla_gorilla
ENSETEG00000016790	SMG6	59	87.500	ENSHBUG00000021311	smg6	62	87.500	Haplochromis_burtoni
ENSETEG00000016790	SMG6	93	100.000	ENSHGLG00000012882	SMG6	93	100.000	Heterocephalus_glaber_female
ENSETEG00000016790	SMG6	93	100.000	ENSHGLG00100017815	SMG6	93	100.000	Heterocephalus_glaber_male
ENSETEG00000016790	SMG6	59	87.500	ENSHCOG00000008761	smg6	88	87.500	Hippocampus_comes
ENSETEG00000016790	SMG6	71	87.805	ENSIPUG00000012493	smg6	64	87.805	Ictalurus_punctatus
ENSETEG00000016790	SMG6	93	100.000	ENSSTOG00000028127	SMG6	93	100.000	Ictidomys_tridecemlineatus
ENSETEG00000016790	SMG6	79	86.250	ENSJJAG00000015367	Smg6	95	84.389	Jaculus_jaculus
ENSETEG00000016790	SMG6	80	87.500	ENSKMAG00000000279	smg6	72	87.500	Kryptolebias_marmoratus
ENSETEG00000016790	SMG6	79	85.000	ENSLBEG00000002184	smg6	69	85.000	Labrus_bergylta
ENSETEG00000016790	SMG6	55	57.543	ENSLACG00000000806	-	98	59.141	Latimeria_chalumnae
ENSETEG00000016790	SMG6	67	87.805	ENSLOCG00000006448	smg6	93	87.805	Lepisosteus_oculatus
ENSETEG00000016790	SMG6	93	100.000	ENSLAFG00000001261	SMG6	93	100.000	Loxodonta_africana
ENSETEG00000016790	SMG6	93	100.000	ENSMFAG00000003394	SMG6	93	100.000	Macaca_fascicularis
ENSETEG00000016790	SMG6	93	100.000	ENSMMUG00000023161	SMG6	93	100.000	Macaca_mulatta
ENSETEG00000016790	SMG6	93	100.000	ENSMNEG00000044592	SMG6	93	100.000	Macaca_nemestrina
ENSETEG00000016790	SMG6	91	100.000	ENSMLEG00000029353	SMG6	92	100.000	Mandrillus_leucophaeus
ENSETEG00000016790	SMG6	71	87.500	ENSMAMG00000020119	smg6	82	87.500	Mastacembelus_armatus
ENSETEG00000016790	SMG6	59	87.500	ENSMZEG00005024736	smg6	65	87.500	Maylandia_zebra
ENSETEG00000016790	SMG6	73	65.406	ENSMGAG00000005401	-	99	65.406	Meleagris_gallopavo
ENSETEG00000016790	SMG6	93	100.000	ENSMICG00000012913	SMG6	93	100.000	Microcebus_murinus
ENSETEG00000016790	SMG6	87	90.000	ENSMMOG00000010883	smg6	88	90.000	Mola_mola
ENSETEG00000016790	SMG6	93	95.238	ENSMODG00000010622	SMG6	93	95.238	Monodelphis_domestica
ENSETEG00000016790	SMG6	76	87.500	ENSMALG00000001106	smg6	84	87.500	Monopterus_albus
ENSETEG00000016790	SMG6	93	100.000	MGP_CAROLIEiJ_G0016729	Smg6	93	100.000	Mus_caroli
ENSETEG00000016790	SMG6	93	100.000	ENSMUSG00000038290	Smg6	93	100.000	Mus_musculus
ENSETEG00000016790	SMG6	93	100.000	MGP_PahariEiJ_G0017866	Smg6	93	100.000	Mus_pahari
ENSETEG00000016790	SMG6	93	100.000	MGP_SPRETEiJ_G0017572	Smg6	93	100.000	Mus_spretus
ENSETEG00000016790	SMG6	93	97.619	ENSMPUG00000013046	SMG6	93	97.619	Mustela_putorius_furo
ENSETEG00000016790	SMG6	93	100.000	ENSMLUG00000005739	SMG6	93	100.000	Myotis_lucifugus
ENSETEG00000016790	SMG6	91	100.000	ENSNGAG00000007287	Smg6	93	100.000	Nannospalax_galili
ENSETEG00000016790	SMG6	76	87.500	ENSNBRG00000009511	smg6	89	87.500	Neolamprologus_brichardi
ENSETEG00000016790	SMG6	91	100.000	ENSNLEG00000017171	SMG6	93	100.000	Nomascus_leucogenys
ENSETEG00000016790	SMG6	91	95.238	ENSMEUG00000015804	SMG6	93	95.238	Notamacropus_eugenii
ENSETEG00000016790	SMG6	93	97.619	ENSODEG00000008038	SMG6	93	97.619	Octodon_degus
ENSETEG00000016790	SMG6	87	87.500	ENSONIG00000005594	smg6	86	87.500	Oreochromis_niloticus
ENSETEG00000016790	SMG6	93	100.000	ENSOCUG00000013018	SMG6	93	100.000	Oryctolagus_cuniculus
ENSETEG00000016790	SMG6	76	87.500	ENSORLG00000003317	smg6	67	87.500	Oryzias_latipes
ENSETEG00000016790	SMG6	70	87.500	ENSORLG00020015343	smg6	62	87.500	Oryzias_latipes_hni
ENSETEG00000016790	SMG6	70	87.500	ENSORLG00015020454	smg6	62	87.500	Oryzias_latipes_hsok
ENSETEG00000016790	SMG6	70	87.500	ENSOMEG00000010838	smg6	62	87.500	Oryzias_melastigma
ENSETEG00000016790	SMG6	93	100.000	ENSOGAG00000004483	SMG6	93	100.000	Otolemur_garnettii
ENSETEG00000016790	SMG6	93	100.000	ENSOARG00000015076	SMG6	93	100.000	Ovis_aries
ENSETEG00000016790	SMG6	93	100.000	ENSPPAG00000043296	SMG6	93	100.000	Pan_paniscus
ENSETEG00000016790	SMG6	93	100.000	ENSPPRG00000014581	SMG6	93	100.000	Panthera_pardus
ENSETEG00000016790	SMG6	91	100.000	ENSPTIG00000008925	SMG6	91	100.000	Panthera_tigris_altaica
ENSETEG00000016790	SMG6	93	100.000	ENSPTRG00000008544	SMG6	93	100.000	Pan_troglodytes
ENSETEG00000016790	SMG6	93	100.000	ENSPANG00000024588	SMG6	93	100.000	Papio_anubis
ENSETEG00000016790	SMG6	88	67.245	ENSPSIG00000006660	SMG6	96	67.536	Pelodiscus_sinensis
ENSETEG00000016790	SMG6	93	90.000	ENSPMGG00000000844	smg6	92	90.000	Periophthalmus_magnuspinnatus
ENSETEG00000016790	SMG6	93	100.000	ENSPEMG00000020707	Smg6	93	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000016790	SMG6	87	87.500	ENSPFOG00000012035	smg6	86	87.500	Poecilia_formosa
ENSETEG00000016790	SMG6	64	87.500	ENSPLAG00000017660	smg6	83	87.500	Poecilia_latipinna
ENSETEG00000016790	SMG6	69	87.500	ENSPMEG00000000258	smg6	83	87.500	Poecilia_mexicana
ENSETEG00000016790	SMG6	70	87.500	ENSPREG00000010066	smg6	83	87.500	Poecilia_reticulata
ENSETEG00000016790	SMG6	93	100.000	ENSPPYG00000007790	SMG6	93	100.000	Pongo_abelii
ENSETEG00000016790	SMG6	93	100.000	ENSPCAG00000000552	SMG6	93	100.000	Procavia_capensis
ENSETEG00000016790	SMG6	93	100.000	ENSPCOG00000020925	SMG6	93	100.000	Propithecus_coquereli
ENSETEG00000016790	SMG6	79	100.000	ENSPVAG00000002159	SMG6	79	100.000	Pteropus_vampyrus
ENSETEG00000016790	SMG6	76	87.500	ENSPNYG00000024151	smg6	89	87.500	Pundamilia_nyererei
ENSETEG00000016790	SMG6	67	92.500	ENSPNAG00000015480	smg6	62	92.500	Pygocentrus_nattereri
ENSETEG00000016790	SMG6	93	100.000	ENSRNOG00000003041	Smg6	93	100.000	Rattus_norvegicus
ENSETEG00000016790	SMG6	93	97.619	ENSRBIG00000024746	SMG6	93	97.619	Rhinopithecus_bieti
ENSETEG00000016790	SMG6	93	97.619	ENSRROG00000030423	SMG6	93	97.619	Rhinopithecus_roxellana
ENSETEG00000016790	SMG6	93	100.000	ENSSBOG00000022518	SMG6	94	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000016790	SMG6	91	95.238	ENSSHAG00000010045	SMG6	91	95.238	Sarcophilus_harrisii
ENSETEG00000016790	SMG6	66	90.476	ENSSFOG00015005436	smg6	69	90.476	Scleropages_formosus
ENSETEG00000016790	SMG6	76	87.500	ENSSMAG00000019777	smg6	66	87.500	Scophthalmus_maximus
ENSETEG00000016790	SMG6	76	90.000	ENSSDUG00000016412	smg6	72	90.000	Seriola_dumerili
ENSETEG00000016790	SMG6	73	51.339	ENSSLDG00000020747	smg6	75	49.015	Seriola_lalandi_dorsalis
ENSETEG00000016790	SMG6	93	92.857	ENSSPUG00000007152	SMG6	93	92.857	Sphenodon_punctatus
ENSETEG00000016790	SMG6	71	90.000	ENSSPAG00000015633	smg6	67	90.000	Stegastes_partitus
ENSETEG00000016790	SMG6	93	100.000	ENSSSCG00000017826	SMG6	93	100.000	Sus_scrofa
ENSETEG00000016790	SMG6	93	90.476	ENSTGUG00000005836	SMG6	93	90.476	Taeniopygia_guttata
ENSETEG00000016790	SMG6	93	90.000	ENSTRUG00000000358	smg6	92	90.000	Takifugu_rubripes
ENSETEG00000016790	SMG6	93	90.000	ENSTNIG00000016164	smg6	92	90.000	Tetraodon_nigroviridis
ENSETEG00000016790	SMG6	93	100.000	ENSTBEG00000011424	SMG6	93	100.000	Tupaia_belangeri
ENSETEG00000016790	SMG6	81	86.705	ENSTTRG00000001175	SMG6	81	86.705	Tursiops_truncatus
ENSETEG00000016790	SMG6	93	100.000	ENSUAMG00000025152	SMG6	93	100.000	Ursus_americanus
ENSETEG00000016790	SMG6	91	100.000	ENSUMAG00000009306	SMG6	93	100.000	Ursus_maritimus
ENSETEG00000016790	SMG6	83	82.959	ENSVPAG00000000225	SMG6	86	82.959	Vicugna_pacos
ENSETEG00000016790	SMG6	93	100.000	ENSVVUG00000021727	SMG6	93	100.000	Vulpes_vulpes
ENSETEG00000016790	SMG6	91	90.476	ENSXETG00000023799	SMG6	93	90.476	Xenopus_tropicalis
ENSETEG00000016790	SMG6	65	87.500	ENSXCOG00000009867	smg6	85	87.500	Xiphophorus_couchianus
ENSETEG00000016790	SMG6	70	87.500	ENSXMAG00000010321	smg6	67	87.500	Xiphophorus_maculatus