EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000017194 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 54335 bases
Position: chrGeneScaffold_1250:1228-55562
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000013955	PRP21_like_P	PF12230.8	4.2e-52	1	1
ENSETEP00000013955	Surp	PF01805.20	7.6e-46	1	2
ENSETEP00000013955	Surp	PF01805.20	7.6e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000017195	SF3A1-201	2100	-	ENSETEP00000013955	700 (aa)	-	UPI0000E42B43

Gene Model

Click here to download ENSETEG00000017194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000017194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000017194	SF3A1	100	95.157	ENSG00000099995	SF3A1	100	83.882	Homo_sapiens
ENSETEG00000017194	SF3A1	95	85.501	ENSAPOG00000020465	sf3a1	85	84.903	Acanthochromis_polyacanthus
ENSETEG00000017194	SF3A1	95	96.856	ENSAMEG00000007737	SF3A1	84	97.006	Ailuropoda_melanoleuca
ENSETEG00000017194	SF3A1	95	85.650	ENSACIG00000020672	sf3a1	85	84.604	Amphilophus_citrinellus
ENSETEG00000017194	SF3A1	95	85.501	ENSAOCG00000003060	sf3a1	85	84.903	Amphiprion_ocellaris
ENSETEG00000017194	SF3A1	95	85.650	ENSAPEG00000010735	sf3a1	85	85.052	Amphiprion_percula
ENSETEG00000017194	SF3A1	95	85.052	ENSATEG00000021201	sf3a1	84	84.604	Anabas_testudineus
ENSETEG00000017194	SF3A1	95	93.534	ENSAPLG00000009057	SF3A1	86	93.871	Anas_platyrhynchos
ENSETEG00000017194	SF3A1	100	83.402	ENSACAG00000009415	SF3A1	85	88.047	Anolis_carolinensis
ENSETEG00000017194	SF3A1	100	96.296	ENSANAG00000032045	SF3A1	89	96.296	Aotus_nancymaae
ENSETEG00000017194	SF3A1	95	86.057	ENSACLG00000012622	sf3a1	85	85.757	Astatotilapia_calliptera
ENSETEG00000017194	SF3A1	95	84.006	ENSAMXG00000005382	sf3a1	85	83.857	Astyanax_mexicanus
ENSETEG00000017194	SF3A1	100	95.869	ENSBTAG00000003390	SF3A1	89	95.869	Bos_taurus
ENSETEG00000017194	SF3A1	77	43.278	WBGene00004188	prp-21	71	44.727	Caenorhabditis_elegans
ENSETEG00000017194	SF3A1	100	96.296	ENSCJAG00000010370	SF3A1	89	96.296	Callithrix_jacchus
ENSETEG00000017194	SF3A1	100	95.726	ENSCAFG00000012559	SF3A1	89	95.726	Canis_familiaris
ENSETEG00000017194	SF3A1	100	95.726	ENSCAFG00020000838	SF3A1	89	95.726	Canis_lupus_dingo
ENSETEG00000017194	SF3A1	100	95.726	ENSCHIG00000018642	SF3A1	89	95.726	Capra_hircus
ENSETEG00000017194	SF3A1	100	95.869	ENSTSYG00000004739	SF3A1	89	95.869	Carlito_syrichta
ENSETEG00000017194	SF3A1	95	82.934	ENSCAPG00000015414	SF3A1	87	82.934	Cavia_aperea
ENSETEG00000017194	SF3A1	100	95.299	ENSCPOG00000014589	SF3A1	84	97.156	Cavia_porcellus
ENSETEG00000017194	SF3A1	100	96.296	ENSCCAG00000032006	SF3A1	89	96.296	Cebus_capucinus
ENSETEG00000017194	SF3A1	100	95.869	ENSCATG00000029241	SF3A1	89	95.869	Cercocebus_atys
ENSETEG00000017194	SF3A1	100	94.444	ENSCLAG00000006508	SF3A1	84	96.707	Chinchilla_lanigera
ENSETEG00000017194	SF3A1	100	95.869	ENSCSAG00000009470	SF3A1	89	95.869	Chlorocebus_sabaeus
ENSETEG00000017194	SF3A1	56	100.000	ENSCHOG00000005201	SF3A1	59	100.000	Choloepus_hoffmanni
ENSETEG00000017194	SF3A1	100	90.313	ENSCPBG00000007595	SF3A1	85	92.216	Chrysemys_picta_bellii
ENSETEG00000017194	SF3A1	93	49.630	ENSCING00000008526	-	65	57.447	Ciona_intestinalis
ENSETEG00000017194	SF3A1	95	48.669	ENSCSAVG00000005608	-	74	54.924	Ciona_savignyi
ENSETEG00000017194	SF3A1	100	95.869	ENSCANG00000033564	SF3A1	89	95.869	Colobus_angolensis_palliatus
ENSETEG00000017194	SF3A1	100	94.587	ENSCGRG00001008933	Sf3a1	84	96.707	Cricetulus_griseus_chok1gshd
ENSETEG00000017194	SF3A1	100	94.587	ENSCGRG00000006127	Sf3a1	84	96.707	Cricetulus_griseus_crigri
ENSETEG00000017194	SF3A1	95	82.810	ENSCSEG00000010792	sf3a1	85	81.913	Cynoglossus_semilaevis
ENSETEG00000017194	SF3A1	95	83.259	ENSCVAG00000004560	sf3a1	85	82.609	Cyprinodon_variegatus
ENSETEG00000017194	SF3A1	95	83.084	ENSDARG00000041887	sf3a1	85	87.838	Danio_rerio
ENSETEG00000017194	SF3A1	100	96.023	ENSDNOG00000010629	SF3A1	89	96.023	Dasypus_novemcinctus
ENSETEG00000017194	SF3A1	100	96.011	ENSDORG00000005613	Sf3a1	89	96.011	Dipodomys_ordii
ENSETEG00000017194	SF3A1	71	61.582	FBgn0266917	Sf3a1	68	60.074	Drosophila_melanogaster
ENSETEG00000017194	SF3A1	95	64.286	ENSEBUG00000001285	sf3a1	84	65.199	Eptatretus_burgeri
ENSETEG00000017194	SF3A1	100	96.154	ENSEASG00005010254	SF3A1	89	96.154	Equus_asinus_asinus
ENSETEG00000017194	SF3A1	100	96.154	ENSECAG00000023962	SF3A1	89	96.154	Equus_caballus
ENSETEG00000017194	SF3A1	74	92.486	ENSEEUG00000003159	SF3A1	72	92.717	Erinaceus_europaeus
ENSETEG00000017194	SF3A1	95	82.738	ENSELUG00000022578	sf3a1	88	81.994	Esox_lucius
ENSETEG00000017194	SF3A1	100	95.869	ENSFCAG00000011932	SF3A1	89	95.869	Felis_catus
ENSETEG00000017194	SF3A1	95	92.319	ENSFALG00000006944	SF3A1	90	94.333	Ficedula_albicollis
ENSETEG00000017194	SF3A1	100	94.444	ENSFDAG00000009560	SF3A1	84	96.707	Fukomys_damarensis
ENSETEG00000017194	SF3A1	99	81.779	ENSFHEG00000010866	sf3a1	85	83.558	Fundulus_heteroclitus
ENSETEG00000017194	SF3A1	100	79.060	ENSGMOG00000016024	sf3a1	85	81.381	Gadus_morhua
ENSETEG00000017194	SF3A1	95	93.524	ENSGALG00000007937	SF3A1	84	93.862	Gallus_gallus
ENSETEG00000017194	SF3A1	95	83.408	ENSGAFG00000009111	sf3a1	85	82.609	Gambusia_affinis
ENSETEG00000017194	SF3A1	95	82.883	ENSGACG00000011893	sf3a1	84	82.733	Gasterosteus_aculeatus
ENSETEG00000017194	SF3A1	100	90.313	ENSGAGG00000000762	SF3A1	88	92.066	Gopherus_agassizii
ENSETEG00000017194	SF3A1	100	95.157	ENSGGOG00000012631	SF3A1	84	97.006	Gorilla_gorilla
ENSETEG00000017194	SF3A1	95	86.057	ENSHBUG00000015795	sf3a1	85	85.757	Haplochromis_burtoni
ENSETEG00000017194	SF3A1	100	94.729	ENSHGLG00000007907	SF3A1	84	97.006	Heterocephalus_glaber_female
ENSETEG00000017194	SF3A1	100	94.729	ENSHGLG00100013799	SF3A1	84	97.006	Heterocephalus_glaber_male
ENSETEG00000017194	SF3A1	95	81.138	ENSHCOG00000015423	sf3a1	85	79.910	Hippocampus_comes
ENSETEG00000017194	SF3A1	95	80.626	ENSIPUG00000002470	sf3a1	86	80.179	Ictalurus_punctatus
ENSETEG00000017194	SF3A1	100	96.154	ENSSTOG00000013892	SF3A1	89	96.154	Ictidomys_tridecemlineatus
ENSETEG00000017194	SF3A1	100	95.875	ENSJJAG00000022566	Sf3a1	89	95.875	Jaculus_jaculus
ENSETEG00000017194	SF3A1	95	83.558	ENSKMAG00000002400	sf3a1	85	83.707	Kryptolebias_marmoratus
ENSETEG00000017194	SF3A1	100	80.512	ENSLBEG00000022974	sf3a1	85	82.459	Labrus_bergylta
ENSETEG00000017194	SF3A1	100	83.898	ENSLACG00000003565	SF3A1	85	88.191	Latimeria_chalumnae
ENSETEG00000017194	SF3A1	100	82.744	ENSLOCG00000008251	sf3a1	85	85.863	Lepisosteus_oculatus
ENSETEG00000017194	SF3A1	100	94.872	ENSLAFG00000000448	SF3A1	88	94.729	Loxodonta_africana
ENSETEG00000017194	SF3A1	93	62.500	ENSLAFG00000026032	-	82	62.500	Loxodonta_africana
ENSETEG00000017194	SF3A1	100	94.729	ENSMFAG00000031979	SF3A1	84	96.856	Macaca_fascicularis
ENSETEG00000017194	SF3A1	100	94.729	ENSMMUG00000005547	SF3A1	100	83.553	Macaca_mulatta
ENSETEG00000017194	SF3A1	100	94.587	ENSMNEG00000037229	SF3A1	84	96.707	Macaca_nemestrina
ENSETEG00000017194	SF3A1	100	95.869	ENSMLEG00000041908	SF3A1	89	95.869	Mandrillus_leucophaeus
ENSETEG00000017194	SF3A1	95	85.949	ENSMAMG00000006460	sf3a1	84	85.650	Mastacembelus_armatus
ENSETEG00000017194	SF3A1	95	86.057	ENSMZEG00005009633	sf3a1	85	85.757	Maylandia_zebra
ENSETEG00000017194	SF3A1	95	93.524	ENSMGAG00000001330	SF3A1	87	93.862	Meleagris_gallopavo
ENSETEG00000017194	SF3A1	91	92.980	ENSMAUG00000020317	Sf3a1	82	93.136	Mesocricetus_auratus
ENSETEG00000017194	SF3A1	100	94.729	ENSMICG00000010038	SF3A1	84	96.856	Microcebus_murinus
ENSETEG00000017194	SF3A1	100	95.869	ENSMOCG00000008438	Sf3a1	89	95.869	Microtus_ochrogaster
ENSETEG00000017194	SF3A1	95	82.159	ENSMMOG00000015588	sf3a1	85	81.259	Mola_mola
ENSETEG00000017194	SF3A1	100	93.875	ENSMODG00000009270	SF3A1	84	96.108	Monodelphis_domestica
ENSETEG00000017194	SF3A1	95	84.880	ENSMALG00000000148	sf3a1	87	83.821	Monopterus_albus
ENSETEG00000017194	SF3A1	95	96.257	MGP_CAROLIEiJ_G0016029	Sf3a1	84	96.407	Mus_caroli
ENSETEG00000017194	SF3A1	95	96.257	ENSMUSG00000002129	Sf3a1	84	96.407	Mus_musculus
ENSETEG00000017194	SF3A1	100	95.014	MGP_PahariEiJ_G0016862	Sf3a1	88	95.014	Mus_pahari
ENSETEG00000017194	SF3A1	95	96.257	MGP_SPRETEiJ_G0016870	Sf3a1	84	96.407	Mus_spretus
ENSETEG00000017194	SF3A1	100	94.729	ENSMPUG00000013144	SF3A1	84	96.856	Mustela_putorius_furo
ENSETEG00000017194	SF3A1	100	96.154	ENSMLUG00000002139	SF3A1	89	96.154	Myotis_lucifugus
ENSETEG00000017194	SF3A1	100	95.299	ENSNGAG00000016977	Sf3a1	84	97.006	Nannospalax_galili
ENSETEG00000017194	SF3A1	95	86.057	ENSNBRG00000016642	sf3a1	85	85.757	Neolamprologus_brichardi
ENSETEG00000017194	SF3A1	100	95.869	ENSNLEG00000003686	SF3A1	89	95.869	Nomascus_leucogenys
ENSETEG00000017194	SF3A1	100	83.618	ENSMEUG00000008741	SF3A1	88	85.180	Notamacropus_eugenii
ENSETEG00000017194	SF3A1	95	96.856	ENSOPRG00000016636	SF3A1	84	97.006	Ochotona_princeps
ENSETEG00000017194	SF3A1	100	95.869	ENSODEG00000002571	SF3A1	89	95.869	Octodon_degus
ENSETEG00000017194	SF3A1	95	85.629	ENSONIG00000010848	sf3a1	85	84.731	Oreochromis_niloticus
ENSETEG00000017194	SF3A1	100	96.011	ENSOCUG00000007633	SF3A1	89	96.011	Oryctolagus_cuniculus
ENSETEG00000017194	SF3A1	95	83.234	ENSORLG00000013050	sf3a1	88	83.533	Oryzias_latipes
ENSETEG00000017194	SF3A1	95	83.982	ENSORLG00020003236	sf3a1	84	83.683	Oryzias_latipes_hni
ENSETEG00000017194	SF3A1	95	83.383	ENSORLG00015017411	sf3a1	85	83.058	Oryzias_latipes_hsok
ENSETEG00000017194	SF3A1	95	83.683	ENSOMEG00000013362	sf3a1	85	83.084	Oryzias_melastigma
ENSETEG00000017194	SF3A1	100	94.587	ENSOGAG00000012931	SF3A1	84	96.707	Otolemur_garnettii
ENSETEG00000017194	SF3A1	100	92.450	ENSOARG00000006849	SF3A1	84	94.611	Ovis_aries
ENSETEG00000017194	SF3A1	100	94.444	ENSPPAG00000041790	SF3A1	89	94.444	Pan_paniscus
ENSETEG00000017194	SF3A1	100	95.869	ENSPPRG00000004391	SF3A1	89	95.869	Panthera_pardus
ENSETEG00000017194	SF3A1	95	98.054	ENSPTIG00000000844	SF3A1	87	98.054	Panthera_tigris_altaica
ENSETEG00000017194	SF3A1	100	95.157	ENSPTRG00000014240	SF3A1	84	97.006	Pan_troglodytes
ENSETEG00000017194	SF3A1	100	95.869	ENSPANG00000020772	SF3A1	89	95.869	Papio_anubis
ENSETEG00000017194	SF3A1	79	91.171	ENSPSIG00000012803	SF3A1	80	94.981	Pelodiscus_sinensis
ENSETEG00000017194	SF3A1	95	83.333	ENSPMGG00000023096	sf3a1	87	83.033	Periophthalmus_magnuspinnatus
ENSETEG00000017194	SF3A1	100	95.869	ENSPEMG00000009494	Sf3a1	89	95.869	Peromyscus_maniculatus_bairdii
ENSETEG00000017194	SF3A1	78	76.503	ENSPMAG00000007139	-	87	78.530	Petromyzon_marinus
ENSETEG00000017194	SF3A1	100	95.014	ENSPCIG00000022692	SF3A1	88	95.014	Phascolarctos_cinereus
ENSETEG00000017194	SF3A1	91	77.726	ENSPFOG00000016768	sf3a1	82	76.791	Poecilia_formosa
ENSETEG00000017194	SF3A1	95	84.454	ENSPLAG00000017268	sf3a1	85	83.259	Poecilia_latipinna
ENSETEG00000017194	SF3A1	82	84.817	ENSPMEG00000019811	sf3a1	84	83.595	Poecilia_mexicana
ENSETEG00000017194	SF3A1	95	84.604	ENSPREG00000010347	sf3a1	85	83.558	Poecilia_reticulata
ENSETEG00000017194	SF3A1	100	95.869	ENSPPYG00000011707	SF3A1	89	95.869	Pongo_abelii
ENSETEG00000017194	SF3A1	100	95.869	ENSPCOG00000026630	SF3A1	89	95.869	Propithecus_coquereli
ENSETEG00000017194	SF3A1	100	94.017	ENSPVAG00000017719	SF3A1	82	96.330	Pteropus_vampyrus
ENSETEG00000017194	SF3A1	95	86.057	ENSPNYG00000018706	sf3a1	85	85.757	Pundamilia_nyererei
ENSETEG00000017194	SF3A1	95	84.375	ENSPNAG00000003721	sf3a1	85	83.929	Pygocentrus_nattereri
ENSETEG00000017194	SF3A1	95	96.407	ENSRNOG00000005218	Sf3a1	84	96.557	Rattus_norvegicus
ENSETEG00000017194	SF3A1	100	95.869	ENSRBIG00000032167	SF3A1	89	95.869	Rhinopithecus_bieti
ENSETEG00000017194	SF3A1	100	95.869	ENSRROG00000044908	SF3A1	97	95.869	Rhinopithecus_roxellana
ENSETEG00000017194	SF3A1	93	97.401	ENSSBOG00000021960	SF3A1	86	99.314	Saimiri_boliviensis_boliviensis
ENSETEG00000017194	SF3A1	95	92.814	ENSSHAG00000003666	SF3A1	85	93.114	Sarcophilus_harrisii
ENSETEG00000017194	SF3A1	100	81.690	ENSSFOG00015004579	sf3a1	85	84.226	Scleropages_formosus
ENSETEG00000017194	SF3A1	95	82.036	ENSSMAG00000004275	sf3a1	85	80.960	Scophthalmus_maximus
ENSETEG00000017194	SF3A1	95	85.180	ENSSDUG00000022219	sf3a1	85	84.132	Seriola_dumerili
ENSETEG00000017194	SF3A1	95	85.180	ENSSLDG00000012642	sf3a1	85	84.132	Seriola_lalandi_dorsalis
ENSETEG00000017194	SF3A1	95	93.862	ENSSARG00000005960	SF3A1	86	93.563	Sorex_araneus
ENSETEG00000017194	SF3A1	95	91.003	ENSSPUG00000018863	SF3A1	85	92.478	Sphenodon_punctatus
ENSETEG00000017194	SF3A1	95	85.928	ENSSPAG00000011856	sf3a1	85	85.030	Stegastes_partitus
ENSETEG00000017194	SF3A1	100	94.729	ENSSSCG00000010002	SF3A1	93	97.006	Sus_scrofa
ENSETEG00000017194	SF3A1	95	93.825	ENSTGUG00000010547	SF3A1	87	94.162	Taeniopygia_guttata
ENSETEG00000017194	SF3A1	100	78.805	ENSTRUG00000006118	sf3a1	85	79.136	Takifugu_rubripes
ENSETEG00000017194	SF3A1	57	80.970	ENSTNIG00000005713	sf3a1	51	83.209	Tetraodon_nigroviridis
ENSETEG00000017194	SF3A1	100	91.738	ENSTBEG00000012771	SF3A1	84	93.713	Tupaia_belangeri
ENSETEG00000017194	SF3A1	100	94.737	ENSTTRG00000001535	SF3A1	84	96.861	Tursiops_truncatus
ENSETEG00000017194	SF3A1	100	94.729	ENSUAMG00000006750	SF3A1	84	97.156	Ursus_americanus
ENSETEG00000017194	SF3A1	99	93.957	ENSUMAG00000016665	SF3A1	91	96.921	Ursus_maritimus
ENSETEG00000017194	SF3A1	100	95.726	ENSVVUG00000003075	SF3A1	89	95.726	Vulpes_vulpes
ENSETEG00000017194	SF3A1	100	84.375	ENSXETG00000016144	sf3a1	85	93.088	Xenopus_tropicalis
ENSETEG00000017194	SF3A1	95	83.408	ENSXCOG00000015653	sf3a1	85	82.609	Xiphophorus_couchianus
ENSETEG00000017194	SF3A1	95	83.558	ENSXMAG00000002753	sf3a1	86	82.759	Xiphophorus_maculatus