EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSETEG00000017608 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Echinops_telfairi
Status
putative
Strand
Plus strand
Length
146207 bases
Position
chrGeneScaffold_9100:214447-360653
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSETEP00000014300tRNA_anti-codonPF01336.256.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSETET00000017608RPA1-2011833-ENSETEP00000014300611 (aa)-UPI0000E43ADA
Gene Model
Click here to download ENSETEG00000017608's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000017608's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSETEG00000017608RPA17961.856ENSAPOG00000019409RPA17961.856Acanthochromis_polyacanthus
ENSETEG00000017608RPA18273.196ENSAPOG00000011658rpa18273.196Acanthochromis_polyacanthus
ENSETEG00000017608RPA18185.567ENSAMEG00000007706RPA18185.567Ailuropoda_melanoleuca
ENSETEG00000017608RPA17864.948ENSACIG00000012881RPA18264.948Amphilophus_citrinellus
ENSETEG00000017608RPA16258.763ENSACIG00000007277rpa17658.763Amphilophus_citrinellus
ENSETEG00000017608RPA18261.856ENSAOCG00000009003RPA18461.856Amphiprion_ocellaris
ENSETEG00000017608RPA18275.510ENSAOCG00000023376rpa18275.510Amphiprion_ocellaris
ENSETEG00000017608RPA18275.510ENSAPEG00000008634rpa18275.510Amphiprion_percula
ENSETEG00000017608RPA18262.887ENSAPEG00000019132RPA18462.887Amphiprion_percula
ENSETEG00000017608RPA17772.165ENSATEG00000022024rpa18172.165Anabas_testudineus
ENSETEG00000017608RPA18264.948ENSATEG00000006443RPA18464.948Anabas_testudineus
ENSETEG00000017608RPA18071.154ENSAPLG00000012442RPA17471.154Anas_platyrhynchos
ENSETEG00000017608RPA18262.927ENSACAG00000014490RPA18163.373Anolis_carolinensis
ENSETEG00000017608RPA18083.541ENSANAG00000023456RPA18283.541Aotus_nancymaae
ENSETEG00000017608RPA17674.227ENSACLG00000006640rpa18174.227Astatotilapia_calliptera
ENSETEG00000017608RPA18265.979ENSACLG00000005223RPA18365.979Astatotilapia_calliptera
ENSETEG00000017608RPA18268.041ENSAMXG00000008418rpa18368.041Astyanax_mexicanus
ENSETEG00000017608RPA18290.625ENSBTAG00000009711RPA18390.625Bos_taurus
ENSETEG00000017608RPA17134.667WBGene00017546rpa-16734.667Caenorhabditis_elegans
ENSETEG00000017608RPA18284.375ENSCJAG00000001848RPA18384.375Callithrix_jacchus
ENSETEG00000017608RPA18286.598ENSCAFG00000019249RPA18386.598Canis_familiaris
ENSETEG00000017608RPA18286.598ENSCAFG00020009847RPA18386.598Canis_lupus_dingo
ENSETEG00000017608RPA18288.542ENSCHIG00000026308RPA18388.542Capra_hircus
ENSETEG00000017608RPA18284.536ENSTSYG00000003482-8384.536Carlito_syrichta
ENSETEG00000017608RPA18284.536ENSCPOG00000000035RPA18384.536Cavia_porcellus
ENSETEG00000017608RPA18283.816ENSCCAG00000010981RPA19183.816Cebus_capucinus
ENSETEG00000017608RPA18286.598ENSCLAG00000005185-8386.598Chinchilla_lanigera
ENSETEG00000017608RPA18283.505ENSCLAG00000015045-8583.505Chinchilla_lanigera
ENSETEG00000017608RPA18282.292ENSCSAG00000013833RPA19182.651Chlorocebus_sabaeus
ENSETEG00000017608RPA15490.254ENSCHOG00000009454-7690.254Choloepus_hoffmanni
ENSETEG00000017608RPA17887.629ENSCHOG00000013540-8287.629Choloepus_hoffmanni
ENSETEG00000017608RPA18280.412ENSCPBG00000020377RPA18280.412Chrysemys_picta_bellii
ENSETEG00000017608RPA18140.786ENSCING00000023482-8140.831Ciona_intestinalis
ENSETEG00000017608RPA18182.292ENSCANG00000030911RPA18182.292Colobus_angolensis_palliatus
ENSETEG00000017608RPA18283.158ENSCGRG00001008197Rpa18383.158Cricetulus_griseus_chok1gshd
ENSETEG00000017608RPA16583.158ENSCGRG00000000582Rpa17983.158Cricetulus_griseus_crigri
ENSETEG00000017608RPA18267.708ENSCSEG00000013066rpa18267.708Cynoglossus_semilaevis
ENSETEG00000017608RPA18263.830ENSCSEG00000012726RPA18263.830Cynoglossus_semilaevis
ENSETEG00000017608RPA18275.789ENSCVAG00000019431rpa18275.789Cyprinodon_variegatus
ENSETEG00000017608RPA18056.250ENSCVAG00000013446-8156.250Cyprinodon_variegatus
ENSETEG00000017608RPA18273.196ENSDARG00000003938rpa18373.196Danio_rerio
ENSETEG00000017608RPA18188.660ENSDNOG00000017218RPA18188.660Dasypus_novemcinctus
ENSETEG00000017608RPA18384.694ENSDORG00000006199Rpa18384.694Dipodomys_ordii
ENSETEG00000017608RPA18141.148FBgn0010173RpA-708142.381Drosophila_melanogaster
ENSETEG00000017608RPA18088.421ENSEASG00005009372RPA18387.629Equus_asinus_asinus
ENSETEG00000017608RPA18287.629ENSECAG00000023886RPA18387.629Equus_caballus
ENSETEG00000017608RPA15190.783ENSEEUG00000002186-5190.783Erinaceus_europaeus
ENSETEG00000017608RPA15165.596ENSELUG00000006136RPA17964.286Esox_lucius
ENSETEG00000017608RPA18371.000ENSELUG00000021071rpa18371.000Esox_lucius
ENSETEG00000017608RPA18383.816ENSFCAG00000006306RPA18383.816Felis_catus
ENSETEG00000017608RPA18276.842ENSFALG00000006575RPA18276.842Ficedula_albicollis
ENSETEG00000017608RPA18286.598ENSFDAG00000007720RPA18386.598Fukomys_damarensis
ENSETEG00000017608RPA18274.737ENSFHEG00000003580rpa18274.737Fundulus_heteroclitus
ENSETEG00000017608RPA18275.510ENSGMOG00000010382rpa18275.510Gadus_morhua
ENSETEG00000017608RPA18272.632ENSGALG00000003072RPA18272.632Gallus_gallus
ENSETEG00000017608RPA18174.468ENSGAFG00000012916rpa18274.468Gambusia_affinis
ENSETEG00000017608RPA18263.918ENSGAFG00000020953RPA18463.918Gambusia_affinis
ENSETEG00000017608RPA18272.165ENSGACG00000010856rpa18272.165Gasterosteus_aculeatus
ENSETEG00000017608RPA18280.412ENSGAGG00000013611RPA18280.412Gopherus_agassizii
ENSETEG00000017608RPA18281.443ENSGGOG00000014186RPA18281.443Gorilla_gorilla
ENSETEG00000017608RPA18272.000ENSHBUG00000017773rpa18274.227Haplochromis_burtoni
ENSETEG00000017608RPA17958.763ENSHBUG00000009348RPA18158.763Haplochromis_burtoni
ENSETEG00000017608RPA18285.567ENSHGLG00000008846RPA18385.567Heterocephalus_glaber_female
ENSETEG00000017608RPA18285.567ENSHGLG00100017755-8385.567Heterocephalus_glaber_male
ENSETEG00000017608RPA18373.913ENSHGLG00100002005-8373.913Heterocephalus_glaber_male
ENSETEG00000017608RPA18383.673ENSHGLG00100000799-8283.673Heterocephalus_glaber_male
ENSETEG00000017608RPA18275.789ENSHCOG00000001401rpa18275.789Hippocampus_comes
ENSETEG00000017608RPA18252.688ENSHCOG00000000351RPA17952.688Hippocampus_comes
ENSETEG00000017608RPA18269.072ENSIPUG00000004400rpa18369.072Ictalurus_punctatus
ENSETEG00000017608RPA18179.707ENSSTOG00000022475RPA18179.707Ictidomys_tridecemlineatus
ENSETEG00000017608RPA17886.598ENSJJAG00000000876Rpa18086.598Jaculus_jaculus
ENSETEG00000017608RPA18271.277ENSKMAG00000005605rpa18271.277Kryptolebias_marmoratus
ENSETEG00000017608RPA18263.918ENSKMAG00000000234RPA18363.918Kryptolebias_marmoratus
ENSETEG00000017608RPA18262.887ENSLBEG00000002281RPA17462.887Labrus_bergylta
ENSETEG00000017608RPA18272.165ENSLBEG00000021604rpa18272.165Labrus_bergylta
ENSETEG00000017608RPA16467.677ENSLACG00000007210RPA17669.534Latimeria_chalumnae
ENSETEG00000017608RPA18278.351ENSLOCG00000006397rpa18278.351Lepisosteus_oculatus
ENSETEG00000017608RPA18290.722ENSLAFG00000015354RPA18490.625Loxodonta_africana
ENSETEG00000017608RPA16583.127ENSMFAG00000036138-7984.158Macaca_fascicularis
ENSETEG00000017608RPA18183.127ENSMMUG00000011604-8284.158Macaca_mulatta
ENSETEG00000017608RPA18279.167ENSMMUG00000002442-8279.167Macaca_mulatta
ENSETEG00000017608RPA17184.015ENSMNEG00000029837-8084.015Macaca_nemestrina
ENSETEG00000017608RPA18282.292ENSMNEG00000031632-8282.292Macaca_nemestrina
ENSETEG00000017608RPA18082.292ENSMLEG00000038768-8482.292Mandrillus_leucophaeus
ENSETEG00000017608RPA18363.265ENSMAMG00000020097RPA18563.265Mastacembelus_armatus
ENSETEG00000017608RPA18273.196ENSMAMG00000017993rpa18273.196Mastacembelus_armatus
ENSETEG00000017608RPA18272.000ENSMZEG00005007551rpa18274.227Maylandia_zebra
ENSETEG00000017608RPA18265.979ENSMZEG00005024731RPA18365.979Maylandia_zebra
ENSETEG00000017608RPA18173.684ENSMGAG00000005315RPA18173.684Meleagris_gallopavo
ENSETEG00000017608RPA18084.211ENSMAUG00000010474Rpa18284.211Mesocricetus_auratus
ENSETEG00000017608RPA18285.567ENSMICG00000012867RPA18385.567Microcebus_murinus
ENSETEG00000017608RPA18283.333ENSMOCG00000013019Rpa18383.333Microtus_ochrogaster
ENSETEG00000017608RPA18161.856ENSMMOG00000010868RPA18161.856Mola_mola
ENSETEG00000017608RPA18272.165ENSMMOG00000014292rpa18272.165Mola_mola
ENSETEG00000017608RPA18285.417ENSMODG00000010549RPA18285.417Monodelphis_domestica
ENSETEG00000017608RPA18161.856ENSMALG00000001208RPA16961.856Monopterus_albus
ENSETEG00000017608RPA18273.684ENSMALG00000011453rpa18273.684Monopterus_albus
ENSETEG00000017608RPA18287.500MGP_CAROLIEiJ_G0016734Rpa18387.500Mus_caroli
ENSETEG00000017608RPA18287.500ENSMUSG00000000751Rpa18487.500Mus_musculus
ENSETEG00000017608RPA18287.500MGP_PahariEiJ_G0017871Rpa18387.500Mus_pahari
ENSETEG00000017608RPA18287.500MGP_SPRETEiJ_G0017577Rpa18487.500Mus_spretus
ENSETEG00000017608RPA18285.507ENSMPUG00000013119RPA18385.507Mustela_putorius_furo
ENSETEG00000017608RPA18283.333ENSMLUG00000006113RPA18383.333Myotis_lucifugus
ENSETEG00000017608RPA17883.505ENSNGAG00000004522Rpa17783.505Nannospalax_galili
ENSETEG00000017608RPA17953.944ENSNBRG00000009672RPA17853.944Neolamprologus_brichardi
ENSETEG00000017608RPA17774.227ENSNBRG00000020595rpa18174.227Neolamprologus_brichardi
ENSETEG00000017608RPA18281.884ENSNLEG00000017149RPA18381.884Nomascus_leucogenys
ENSETEG00000017608RPA18186.869ENSMEUG00000006714RPA18286.869Notamacropus_eugenii
ENSETEG00000017608RPA18285.567ENSODEG00000009038RPA18385.567Octodon_degus
ENSETEG00000017608RPA18274.227ENSONIG00000013135rpa18274.227Oreochromis_niloticus
ENSETEG00000017608RPA18085.567ENSOANG00000010880RPA18285.567Ornithorhynchus_anatinus
ENSETEG00000017608RPA18286.458ENSOCUG00000001504RPA18386.458Oryctolagus_cuniculus
ENSETEG00000017608RPA18366.327ENSORLG00000003368RPA18466.327Oryzias_latipes
ENSETEG00000017608RPA18270.408ENSORLG00000004856rpa18270.408Oryzias_latipes
ENSETEG00000017608RPA18366.327ENSORLG00020015284RPA18566.327Oryzias_latipes_hni
ENSETEG00000017608RPA18270.408ENSORLG00020008980rpa18270.408Oryzias_latipes_hni
ENSETEG00000017608RPA18270.408ENSORLG00015013982rpa18270.408Oryzias_latipes_hsok
ENSETEG00000017608RPA15466.154ENSORLG00015005867-7466.154Oryzias_latipes_hsok
ENSETEG00000017608RPA18366.327ENSORLG00015020383RPA18466.327Oryzias_latipes_hsok
ENSETEG00000017608RPA18262.245ENSOMEG00000004704rpa18362.245Oryzias_melastigma
ENSETEG00000017608RPA17765.152ENSOMEG00000011040RPA17965.152Oryzias_melastigma
ENSETEG00000017608RPA18285.567ENSOGAG00000005581-8386.458Otolemur_garnettii
ENSETEG00000017608RPA16285.567ENSOGAG00000029379-8185.567Otolemur_garnettii
ENSETEG00000017608RPA18288.542ENSOARG00000014479RPA18388.542Ovis_aries
ENSETEG00000017608RPA18282.367ENSPPAG00000039680RPA18382.367Pan_paniscus
ENSETEG00000017608RPA18383.575ENSPPRG00000011807RPA18383.575Panthera_pardus
ENSETEG00000017608RPA18383.092ENSPTIG00000007898RPA18383.092Panthera_tigris_altaica
ENSETEG00000017608RPA18282.367ENSPTRG00000008539RPA18382.367Pan_troglodytes
ENSETEG00000017608RPA18282.609ENSPANG00000024592RPA18383.614Papio_anubis
ENSETEG00000017608RPA17775.385ENSPKIG00000008053rpa17775.385Paramormyrops_kingsleyae
ENSETEG00000017608RPA18078.351ENSPSIG00000015617RPA18278.351Pelodiscus_sinensis
ENSETEG00000017608RPA18175.258ENSPMGG00000011589rpa18275.258Periophthalmus_magnuspinnatus
ENSETEG00000017608RPA18260.000ENSPMGG00000000543RPA18260.000Periophthalmus_magnuspinnatus
ENSETEG00000017608RPA18283.158ENSPEMG00000021061Rpa18383.158Peromyscus_maniculatus_bairdii
ENSETEG00000017608RPA18384.848ENSPCIG00000019049RPA18384.848Phascolarctos_cinereus
ENSETEG00000017608RPA18174.468ENSPFOG00000003987rpa18274.468Poecilia_formosa
ENSETEG00000017608RPA18174.468ENSPLAG00000004984rpa18274.468Poecilia_latipinna
ENSETEG00000017608RPA17761.538ENSPLAG00000008844-8161.538Poecilia_latipinna
ENSETEG00000017608RPA17761.538ENSPMEG00000003627-8161.538Poecilia_mexicana
ENSETEG00000017608RPA18174.468ENSPMEG00000020602rpa18274.468Poecilia_mexicana
ENSETEG00000017608RPA18263.918ENSPREG00000010119RPA18563.918Poecilia_reticulata
ENSETEG00000017608RPA17672.308ENSPREG00000010174rpa18572.308Poecilia_reticulata
ENSETEG00000017608RPA18285.749ENSPCOG00000001799RPA18385.749Propithecus_coquereli
ENSETEG00000017608RPA18285.749ENSPVAG00000002149RPA18385.749Pteropus_vampyrus
ENSETEG00000017608RPA18272.000ENSPNYG00000016316rpa18274.227Pundamilia_nyererei
ENSETEG00000017608RPA18265.979ENSPNYG00000024165RPA18365.979Pundamilia_nyererei
ENSETEG00000017608RPA18268.041ENSPNAG00000008599rpa18268.041Pygocentrus_nattereri
ENSETEG00000017608RPA18285.263ENSRNOG00000003123Rpa18385.263Rattus_norvegicus
ENSETEG00000017608RPA18282.892ENSRBIG00000036587RPA18382.892Rhinopithecus_bieti
ENSETEG00000017608RPA17782.892ENSRROG00000043278RPA18282.892Rhinopithecus_roxellana
ENSETEG00000017608RPA18131.884YAR007CRFA18131.884Saccharomyces_cerevisiae
ENSETEG00000017608RPA18083.333ENSSBOG00000030233RPA18183.333Saimiri_boliviensis_boliviensis
ENSETEG00000017608RPA18285.859ENSSHAG00000007969RPA18285.859Sarcophilus_harrisii
ENSETEG00000017608RPA18274.737ENSSFOG00015005362rpa17674.737Scleropages_formosus
ENSETEG00000017608RPA18264.948ENSSMAG00000019746RPA18464.948Scophthalmus_maximus
ENSETEG00000017608RPA18264.948ENSSDUG00000016358RPA17364.948Seriola_dumerili
ENSETEG00000017608RPA18272.165ENSSDUG00000011949rpa18272.165Seriola_dumerili
ENSETEG00000017608RPA18272.165ENSSLDG00000011806rpa18272.165Seriola_lalandi_dorsalis
ENSETEG00000017608RPA17365.263ENSSLDG00000020784RPA17565.263Seriola_lalandi_dorsalis
ENSETEG00000017608RPA17081.390ENSSARG00000007506RPA17281.390Sorex_araneus
ENSETEG00000017608RPA17971.875ENSSPUG00000007223RPA18171.875Sphenodon_punctatus
ENSETEG00000017608RPA18273.196ENSSPAG00000009903rpa18273.196Stegastes_partitus
ENSETEG00000017608RPA17863.830ENSSPAG00000011165RPA17963.830Stegastes_partitus
ENSETEG00000017608RPA18287.500ENSSSCG00000017822RPA18287.500Sus_scrofa
ENSETEG00000017608RPA18276.842ENSTGUG00000005775RPA18276.842Taeniopygia_guttata
ENSETEG00000017608RPA18273.469ENSTRUG00000003616rpa18273.469Takifugu_rubripes
ENSETEG00000017608RPA18262.766ENSTRUG00000000405RPA17762.766Takifugu_rubripes
ENSETEG00000017608RPA18274.227ENSTNIG00000016199rpa18274.227Tetraodon_nigroviridis
ENSETEG00000017608RPA16193.023ENSTBEG00000002709RPA16393.023Tupaia_belangeri
ENSETEG00000017608RPA18288.542ENSTTRG00000001169RPA18288.542Tursiops_truncatus
ENSETEG00000017608RPA17198.039ENSUAMG00000015676RPA18098.039Ursus_americanus
ENSETEG00000017608RPA18286.598ENSUMAG00000009328RPA18386.598Ursus_maritimus
ENSETEG00000017608RPA18289.583ENSVPAG00000009443RPA18389.583Vicugna_pacos
ENSETEG00000017608RPA18286.598ENSVVUG00000021715RPA18386.598Vulpes_vulpes
ENSETEG00000017608RPA18280.412ENSXETG00000013538rpa18280.412Xenopus_tropicalis
ENSETEG00000017608RPA17662.887ENSXCOG00000009899-8062.887Xiphophorus_couchianus
ENSETEG00000017608RPA17672.308ENSXCOG00000010068rpa17772.308Xiphophorus_couchianus
ENSETEG00000017608RPA18262.887ENSXMAG00000010333RPA18162.887Xiphophorus_maculatus
ENSETEG00000017608RPA18172.340ENSXMAG00000004102rpa18272.340Xiphophorus_maculatus

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