EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000018453 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 10336 bases
Position: chrGeneScaffold_1112:1243-11578
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000015001	PABP	PF00658.18	3.8e-31	1	1
ENSETEP00000015001	RRM_1	PF00076.22	1.5e-62	1	3
ENSETEP00000015001	RRM_1	PF00076.22	1.5e-62	2	3
ENSETEP00000015001	RRM_1	PF00076.22	1.5e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000018452	-	1986	-	ENSETEP00000015001	661 (aa)	-	UPI0000E41D7B

Gene Model

Click here to download ENSETEG00000018453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000018453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000018453	-	70	82.692	ENSETEG00000002793	-	77	82.692
ENSETEG00000018453	-	74	61.875	ENSETEG00000019213	-	99	60.168
ENSETEG00000018453	-	74	64.403	ENSETEG00000009172	-	99	64.228
ENSETEG00000018453	-	78	82.812	ENSETEG00000009969	PABPC1L	71	82.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000018453	-	84	100.000	ENSG00000090621	PABPC4	100	100.000	Homo_sapiens
ENSETEG00000018453	-	84	90.625	ENSAPOG00000001161	pabpc4	100	90.625	Acanthochromis_polyacanthus
ENSETEG00000018453	-	83	54.545	ENSAMEG00000015083	-	81	54.545	Ailuropoda_melanoleuca
ENSETEG00000018453	-	84	98.438	ENSAMEG00000011535	-	100	98.438	Ailuropoda_melanoleuca
ENSETEG00000018453	-	84	90.625	ENSACIG00000023343	pabpc4	100	90.625	Amphilophus_citrinellus
ENSETEG00000018453	-	84	90.625	ENSAOCG00000021529	pabpc4	100	90.625	Amphiprion_ocellaris
ENSETEG00000018453	-	84	90.625	ENSAPEG00000019196	pabpc4	100	90.625	Amphiprion_percula
ENSETEG00000018453	-	84	90.625	ENSATEG00000007402	pabpc4	100	90.625	Anabas_testudineus
ENSETEG00000018453	-	84	89.062	ENSAPLG00000009729	-	100	89.062	Anas_platyrhynchos
ENSETEG00000018453	-	74	83.130	ENSACAG00000002544	PABPC4	96	81.911	Anolis_carolinensis
ENSETEG00000018453	-	84	100.000	ENSANAG00000025079	PABPC4	100	100.000	Aotus_nancymaae
ENSETEG00000018453	-	84	90.625	ENSACLG00000019558	pabpc4	100	90.625	Astatotilapia_calliptera
ENSETEG00000018453	-	84	93.846	ENSAMXG00000018779	pabpc4	99	93.846	Astyanax_mexicanus
ENSETEG00000018453	-	84	100.000	ENSBTAG00000017125	PABPC4	100	100.000	Bos_taurus
ENSETEG00000018453	-	84	100.000	ENSCJAG00000002512	-	100	100.000	Callithrix_jacchus
ENSETEG00000018453	-	54	82.051	ENSCJAG00000045953	-	92	81.985	Callithrix_jacchus
ENSETEG00000018453	-	84	100.000	ENSCAFG00000003081	PABPC4	100	100.000	Canis_familiaris
ENSETEG00000018453	-	84	100.000	ENSCAFG00020004161	PABPC4	100	100.000	Canis_lupus_dingo
ENSETEG00000018453	-	84	100.000	ENSCHIG00000019398	-	100	100.000	Capra_hircus
ENSETEG00000018453	-	84	87.302	ENSCHIG00000023385	-	100	87.302	Capra_hircus
ENSETEG00000018453	-	84	100.000	ENSTSYG00000006532	PABPC4	100	100.000	Carlito_syrichta
ENSETEG00000018453	-	84	100.000	ENSCAPG00000015984	PABPC4	100	100.000	Cavia_aperea
ENSETEG00000018453	-	84	100.000	ENSCPOG00000009552	PABPC4	100	100.000	Cavia_porcellus
ENSETEG00000018453	-	84	100.000	ENSCCAG00000037306	PABPC4	100	100.000	Cebus_capucinus
ENSETEG00000018453	-	84	100.000	ENSCATG00000042164	PABPC4	100	100.000	Cercocebus_atys
ENSETEG00000018453	-	84	100.000	ENSCLAG00000011899	PABPC4	100	100.000	Chinchilla_lanigera
ENSETEG00000018453	-	84	100.000	ENSCSAG00000001135	PABPC4	100	100.000	Chlorocebus_sabaeus
ENSETEG00000018453	-	57	95.290	ENSCHOG00000005327	PABPC4	76	95.290	Choloepus_hoffmanni
ENSETEG00000018453	-	84	96.875	ENSCPBG00000001038	PABPC4	100	96.875	Chrysemys_picta_bellii
ENSETEG00000018453	-	83	100.000	ENSCANG00000034177	PABPC4	100	100.000	Colobus_angolensis_palliatus
ENSETEG00000018453	-	83	100.000	ENSCGRG00001018166	Pabpc4	100	100.000	Cricetulus_griseus_chok1gshd
ENSETEG00000018453	-	82	100.000	ENSCGRG00000009777	Pabpc4	100	100.000	Cricetulus_griseus_crigri
ENSETEG00000018453	-	84	90.625	ENSCSEG00000000130	pabpc4	100	90.625	Cynoglossus_semilaevis
ENSETEG00000018453	-	83	94.545	ENSCVAG00000019246	pabpc4	100	94.545	Cyprinodon_variegatus
ENSETEG00000018453	-	83	93.846	ENSDARG00000059259	pabpc4	100	93.846	Danio_rerio
ENSETEG00000018453	-	73	97.107	ENSDNOG00000018444	-	95	97.107	Dasypus_novemcinctus
ENSETEG00000018453	-	84	100.000	ENSDORG00000011581	Pabpc4	100	100.000	Dipodomys_ordii
ENSETEG00000018453	-	82	92.188	ENSEBUG00000013782	pabpc4	99	92.188	Eptatretus_burgeri
ENSETEG00000018453	-	84	90.625	ENSEBUG00000000992	pabpc4	100	90.625	Eptatretus_burgeri
ENSETEG00000018453	-	84	100.000	ENSEASG00005014119	PABPC4	100	100.000	Equus_asinus_asinus
ENSETEG00000018453	-	84	100.000	ENSECAG00000009396	PABPC4	100	100.000	Equus_caballus
ENSETEG00000018453	-	84	100.000	ENSEEUG00000002962	PABPC4	100	100.000	Erinaceus_europaeus
ENSETEG00000018453	-	83	90.323	ENSELUG00000003195	pabpc4	98	90.323	Esox_lucius
ENSETEG00000018453	-	84	100.000	ENSFCAG00000015254	-	100	100.000	Felis_catus
ENSETEG00000018453	-	84	95.312	ENSFALG00000000543	PABPC4	100	95.312	Ficedula_albicollis
ENSETEG00000018453	-	74	65.914	ENSFDAG00000010581	-	93	65.298	Fukomys_damarensis
ENSETEG00000018453	-	84	100.000	ENSFDAG00000020016	-	100	100.000	Fukomys_damarensis
ENSETEG00000018453	-	84	90.625	ENSFHEG00000007548	pabpc4	100	90.625	Fundulus_heteroclitus
ENSETEG00000018453	-	84	89.231	ENSGMOG00000019025	pabpc4	99	89.231	Gadus_morhua
ENSETEG00000018453	-	84	95.312	ENSGALG00000003800	PABPC4	100	95.312	Gallus_gallus
ENSETEG00000018453	-	84	90.625	ENSGAFG00000018195	pabpc4	100	97.436	Gambusia_affinis
ENSETEG00000018453	-	84	89.062	ENSGACG00000007179	pabpc4	100	89.062	Gasterosteus_aculeatus
ENSETEG00000018453	-	84	95.312	ENSGAGG00000001888	PABPC4	100	95.312	Gopherus_agassizii
ENSETEG00000018453	-	84	100.000	ENSGGOG00000004002	PABPC4	100	100.000	Gorilla_gorilla
ENSETEG00000018453	-	84	90.625	ENSHBUG00000020206	pabpc4	100	90.625	Haplochromis_burtoni
ENSETEG00000018453	-	84	100.000	ENSHGLG00000011162	PABPC4	100	100.000	Heterocephalus_glaber_female
ENSETEG00000018453	-	84	100.000	ENSHGLG00100001580	PABPC4	100	100.000	Heterocephalus_glaber_male
ENSETEG00000018453	-	84	90.625	ENSHCOG00000012694	pabpc4	100	90.625	Hippocampus_comes
ENSETEG00000018453	-	82	95.312	ENSIPUG00000016620	pabpc4	99	95.312	Ictalurus_punctatus
ENSETEG00000018453	-	84	100.000	ENSSTOG00000010416	PABPC4	100	100.000	Ictidomys_tridecemlineatus
ENSETEG00000018453	-	84	100.000	ENSJJAG00000007781	Pabpc4	100	100.000	Jaculus_jaculus
ENSETEG00000018453	-	84	90.625	ENSKMAG00000013597	pabpc4	99	90.625	Kryptolebias_marmoratus
ENSETEG00000018453	-	84	90.769	ENSLBEG00000013654	pabpc4	100	90.769	Labrus_bergylta
ENSETEG00000018453	-	84	95.312	ENSLACG00000011907	PABPC4	100	95.312	Latimeria_chalumnae
ENSETEG00000018453	-	84	92.063	ENSLOCG00000001877	pabpc4	99	92.063	Lepisosteus_oculatus
ENSETEG00000018453	-	84	100.000	ENSLAFG00000000151	PABPC4	100	100.000	Loxodonta_africana
ENSETEG00000018453	-	84	100.000	ENSMFAG00000041481	PABPC4	100	100.000	Macaca_fascicularis
ENSETEG00000018453	-	84	100.000	ENSMMUG00000007497	PABPC4	100	100.000	Macaca_mulatta
ENSETEG00000018453	-	84	100.000	ENSMNEG00000043054	PABPC4	100	100.000	Macaca_nemestrina
ENSETEG00000018453	-	84	100.000	ENSMLEG00000040716	PABPC4	100	100.000	Mandrillus_leucophaeus
ENSETEG00000018453	-	84	90.625	ENSMAMG00000010025	pabpc4	99	90.625	Mastacembelus_armatus
ENSETEG00000018453	-	84	90.625	ENSMZEG00005006141	pabpc4	100	90.625	Maylandia_zebra
ENSETEG00000018453	-	74	83.976	ENSMGAG00000005408	PABPC4	100	83.773	Meleagris_gallopavo
ENSETEG00000018453	-	57	100.000	ENSMAUG00000019763	-	78	100.000	Mesocricetus_auratus
ENSETEG00000018453	-	75	72.782	ENSMICG00000036729	-	73	97.425	Microcebus_murinus
ENSETEG00000018453	-	74	100.000	ENSMICG00000016633	-	100	100.000	Microcebus_murinus
ENSETEG00000018453	-	84	100.000	ENSMOCG00000006763	Pabpc4	100	100.000	Microtus_ochrogaster
ENSETEG00000018453	-	72	90.625	ENSMMOG00000002363	pabpc4	99	90.625	Mola_mola
ENSETEG00000018453	-	82	98.438	ENSMODG00000017657	-	100	98.438	Monodelphis_domestica
ENSETEG00000018453	-	84	90.625	ENSMALG00000011017	pabpc4	100	90.625	Monopterus_albus
ENSETEG00000018453	-	75	79.352	MGP_CAROLIEiJ_G0024864	-	96	79.150	Mus_caroli
ENSETEG00000018453	-	84	96.146	MGP_CAROLIEiJ_G0026435	-	99	97.297	Mus_caroli
ENSETEG00000018453	-	84	100.000	ENSMUSG00000011257	Pabpc4	100	100.000	Mus_musculus
ENSETEG00000018453	-	83	100.000	MGP_PahariEiJ_G0028765	Pabpc4	100	100.000	Mus_pahari
ENSETEG00000018453	-	83	100.000	MGP_SPRETEiJ_G0027415	Pabpc4	100	100.000	Mus_spretus
ENSETEG00000018453	-	71	49.894	ENSMPUG00000006836	-	86	49.471	Mustela_putorius_furo
ENSETEG00000018453	-	84	100.000	ENSMPUG00000014414	-	100	100.000	Mustela_putorius_furo
ENSETEG00000018453	-	84	100.000	ENSMLUG00000012068	PABPC4	100	100.000	Myotis_lucifugus
ENSETEG00000018453	-	84	100.000	ENSNGAG00000018292	Pabpc4	100	100.000	Nannospalax_galili
ENSETEG00000018453	-	84	100.000	ENSNLEG00000011928	PABPC4	100	100.000	Nomascus_leucogenys
ENSETEG00000018453	-	66	100.000	ENSOPRG00000011984	PABPC4	87	100.000	Ochotona_princeps
ENSETEG00000018453	-	75	88.115	ENSODEG00000017434	-	100	88.008	Octodon_degus
ENSETEG00000018453	-	84	100.000	ENSODEG00000006592	-	100	100.000	Octodon_degus
ENSETEG00000018453	-	84	90.625	ENSONIG00000008176	pabpc4	100	90.625	Oreochromis_niloticus
ENSETEG00000018453	-	84	93.750	ENSOANG00000010001	PABPC4	100	93.750	Ornithorhynchus_anatinus
ENSETEG00000018453	-	80	100.000	ENSOCUG00000000562	PABPC4	88	100.000	Oryctolagus_cuniculus
ENSETEG00000018453	-	84	90.625	ENSORLG00000017479	pabpc4	99	90.625	Oryzias_latipes
ENSETEG00000018453	-	84	90.625	ENSORLG00020018644	pabpc4	99	90.625	Oryzias_latipes_hni
ENSETEG00000018453	-	84	90.625	ENSORLG00015015042	pabpc4	99	90.625	Oryzias_latipes_hsok
ENSETEG00000018453	-	84	90.625	ENSOMEG00000014410	pabpc4	99	90.625	Oryzias_melastigma
ENSETEG00000018453	-	84	100.000	ENSOGAG00000004067	PABPC4	100	100.000	Otolemur_garnettii
ENSETEG00000018453	-	84	100.000	ENSOARG00000020060	PABPC4	100	100.000	Ovis_aries
ENSETEG00000018453	-	84	100.000	ENSPPAG00000043625	PABPC4	100	100.000	Pan_paniscus
ENSETEG00000018453	-	84	100.000	ENSPPRG00000024727	PABPC4	100	100.000	Panthera_pardus
ENSETEG00000018453	-	84	100.000	ENSPTIG00000005829	PABPC4	100	100.000	Panthera_tigris_altaica
ENSETEG00000018453	-	84	100.000	ENSPTRG00000000573	PABPC4	100	100.000	Pan_troglodytes
ENSETEG00000018453	-	84	100.000	ENSPANG00000009484	PABPC4	100	100.000	Papio_anubis
ENSETEG00000018453	-	84	95.161	ENSPKIG00000025356	pabpc4	99	95.161	Paramormyrops_kingsleyae
ENSETEG00000018453	-	84	96.875	ENSPSIG00000016892	PABPC4	100	96.875	Pelodiscus_sinensis
ENSETEG00000018453	-	84	90.625	ENSPMGG00000009073	pabpc4	99	90.625	Periophthalmus_magnuspinnatus
ENSETEG00000018453	-	84	100.000	ENSPEMG00000023569	-	99	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000018453	-	84	98.438	ENSPEMG00000024193	-	99	98.438	Peromyscus_maniculatus_bairdii
ENSETEG00000018453	-	72	65.714	ENSPMAG00000007885	pabpc4	100	64.764	Petromyzon_marinus
ENSETEG00000018453	-	74	92.188	ENSPMAG00000002836	pabpc4	100	92.188	Petromyzon_marinus
ENSETEG00000018453	-	82	98.438	ENSPCIG00000020674	PABPC4	100	100.000	Phascolarctos_cinereus
ENSETEG00000018453	-	84	90.625	ENSPFOG00000002682	pabpc4	100	90.625	Poecilia_formosa
ENSETEG00000018453	-	84	90.625	ENSPLAG00000010112	pabpc4	100	90.625	Poecilia_latipinna
ENSETEG00000018453	-	83	90.625	ENSPMEG00000019739	pabpc4	100	90.625	Poecilia_mexicana
ENSETEG00000018453	-	84	90.625	ENSPREG00000001589	pabpc4	100	90.625	Poecilia_reticulata
ENSETEG00000018453	-	84	100.000	ENSPPYG00000001506	PABPC4	100	100.000	Pongo_abelii
ENSETEG00000018453	-	84	100.000	ENSPCAG00000003341	PABPC4	100	100.000	Procavia_capensis
ENSETEG00000018453	-	75	84.584	ENSPCOG00000025882	-	95	82.961	Propithecus_coquereli
ENSETEG00000018453	-	84	100.000	ENSPCOG00000023725	-	100	100.000	Propithecus_coquereli
ENSETEG00000018453	-	75	96.755	ENSPVAG00000002187	PABPC4	95	96.755	Pteropus_vampyrus
ENSETEG00000018453	-	84	90.625	ENSPNYG00000006134	pabpc4	100	90.625	Pundamilia_nyererei
ENSETEG00000018453	-	84	92.308	ENSPNAG00000024355	pabpc4	100	92.308	Pygocentrus_nattereri
ENSETEG00000018453	-	84	95.312	ENSRNOG00000028592	AABR07035074.1	100	95.312	Rattus_norvegicus
ENSETEG00000018453	-	84	100.000	ENSRNOG00000015642	Pabpc4	100	100.000	Rattus_norvegicus
ENSETEG00000018453	-	84	100.000	ENSRBIG00000039761	PABPC4	100	100.000	Rhinopithecus_bieti
ENSETEG00000018453	-	84	100.000	ENSRROG00000033355	PABPC4	100	100.000	Rhinopithecus_roxellana
ENSETEG00000018453	-	84	100.000	ENSSBOG00000026193	PABPC4	100	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000018453	-	82	98.438	ENSSHAG00000018139	PABPC4	100	98.438	Sarcophilus_harrisii
ENSETEG00000018453	-	80	100.000	ENSSFOG00015023514	pabpc4	99	100.000	Scleropages_formosus
ENSETEG00000018453	-	84	90.625	ENSSMAG00000009007	pabpc4	99	90.625	Scophthalmus_maximus
ENSETEG00000018453	-	84	90.625	ENSSDUG00000012683	pabpc4	100	90.625	Seriola_dumerili
ENSETEG00000018453	-	84	90.625	ENSSLDG00000013025	pabpc4	100	90.625	Seriola_lalandi_dorsalis
ENSETEG00000018453	-	75	95.943	ENSSARG00000000310	PABPC4	90	95.943	Sorex_araneus
ENSETEG00000018453	-	84	96.875	ENSSPUG00000003204	PABPC4	100	96.875	Sphenodon_punctatus
ENSETEG00000018453	-	84	90.625	ENSSPAG00000009252	pabpc4	99	90.625	Stegastes_partitus
ENSETEG00000018453	-	84	100.000	ENSSSCG00000003660	-	100	100.000	Sus_scrofa
ENSETEG00000018453	-	72	51.139	ENSSSCG00000036170	-	87	54.000	Sus_scrofa
ENSETEG00000018453	-	84	95.312	ENSTGUG00000001266	PABPC4	100	95.312	Taeniopygia_guttata
ENSETEG00000018453	-	84	90.625	ENSTRUG00000005907	pabpc4	99	90.625	Takifugu_rubripes
ENSETEG00000018453	-	84	90.625	ENSTNIG00000016902	pabpc4	99	90.625	Tetraodon_nigroviridis
ENSETEG00000018453	-	75	89.047	ENSTBEG00000009035	PABPC4	89	88.844	Tupaia_belangeri
ENSETEG00000018453	-	75	81.453	ENSTTRG00000014340	PABPC4	95	80.880	Tursiops_truncatus
ENSETEG00000018453	-	84	100.000	ENSUAMG00000000303	PABPC4	100	100.000	Ursus_americanus
ENSETEG00000018453	-	84	100.000	ENSUMAG00000019585	PABPC4	100	100.000	Ursus_maritimus
ENSETEG00000018453	-	68	100.000	ENSVPAG00000010041	PABPC4	68	100.000	Vicugna_pacos
ENSETEG00000018453	-	84	100.000	ENSVVUG00000005215	PABPC4	100	100.000	Vulpes_vulpes
ENSETEG00000018453	-	84	95.312	ENSXETG00000010946	pabpc4	100	95.312	Xenopus_tropicalis
ENSETEG00000018453	-	75	75.202	ENSXCOG00000013190	pabpc4	96	89.055	Xiphophorus_couchianus
ENSETEG00000018453	-	84	90.625	ENSXMAG00000019007	pabpc4	100	90.625	Xiphophorus_maculatus