EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000019682 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 81567 bases
Position: chrGeneScaffold_627:85789-167355
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000015987	HVSL	PF09749.9	8.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000019682	USB1-201	804	-	ENSETEP00000015987	267 (aa)	-	UPI0000E40E49

Gene Model

Click here to download ENSETEG00000019682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000019682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000019682	USB1	100	70.412	ENSG00000103005	USB1	97	75.706	Homo_sapiens
ENSETEG00000019682	USB1	98	40.502	ENSAPOG00000011942	usb1	99	40.502	Acanthochromis_polyacanthus
ENSETEG00000019682	USB1	100	68.401	ENSAMEG00000017205	USB1	100	69.145	Ailuropoda_melanoleuca
ENSETEG00000019682	USB1	86	44.541	ENSACIG00000012234	usb1	99	42.593	Amphilophus_citrinellus
ENSETEG00000019682	USB1	98	40.702	ENSAOCG00000014831	usb1	99	41.053	Amphiprion_ocellaris
ENSETEG00000019682	USB1	98	40.702	ENSAPEG00000000296	usb1	99	41.053	Amphiprion_percula
ENSETEG00000019682	USB1	94	42.688	ENSATEG00000009348	usb1	99	41.429	Anabas_testudineus
ENSETEG00000019682	USB1	84	58.150	ENSAPLG00000002756	USB1	100	58.590	Anas_platyrhynchos
ENSETEG00000019682	USB1	85	53.712	ENSACAG00000015481	USB1	100	53.712	Anolis_carolinensis
ENSETEG00000019682	USB1	100	69.288	ENSANAG00000035640	USB1	95	75.000	Aotus_nancymaae
ENSETEG00000019682	USB1	94	42.629	ENSACLG00000020586	usb1	99	41.489	Astatotilapia_calliptera
ENSETEG00000019682	USB1	84	43.556	ENSAMXG00000040146	usb1	95	38.832	Astyanax_mexicanus
ENSETEG00000019682	USB1	100	71.161	ENSBTAG00000015758	USB1	100	71.161	Bos_taurus
ENSETEG00000019682	USB1	100	70.037	ENSCJAG00000011733	USB1	95	75.658	Callithrix_jacchus
ENSETEG00000019682	USB1	99	66.912	ENSCAFG00000008556	USB1	73	67.279	Canis_familiaris
ENSETEG00000019682	USB1	99	67.293	ENSCAFG00020009263	USB1	99	67.293	Canis_lupus_dingo
ENSETEG00000019682	USB1	100	69.663	ENSCHIG00000024290	USB1	100	69.663	Capra_hircus
ENSETEG00000019682	USB1	100	68.539	ENSTSYG00000006997	USB1	100	68.539	Carlito_syrichta
ENSETEG00000019682	USB1	87	56.466	ENSCAPG00000009057	USB1	100	56.466	Cavia_aperea
ENSETEG00000019682	USB1	100	66.791	ENSCPOG00000014325	USB1	100	66.791	Cavia_porcellus
ENSETEG00000019682	USB1	100	69.288	ENSCCAG00000022132	USB1	100	69.288	Cebus_capucinus
ENSETEG00000019682	USB1	100	70.037	ENSCATG00000032174	USB1	96	75.163	Cercocebus_atys
ENSETEG00000019682	USB1	65	68.786	ENSCLAG00000007363	USB1	98	68.786	Chinchilla_lanigera
ENSETEG00000019682	USB1	100	70.412	ENSCSAG00000004783	USB1	100	70.787	Chlorocebus_sabaeus
ENSETEG00000019682	USB1	92	54.694	ENSCPBG00000026943	USB1	100	53.047	Chrysemys_picta_bellii
ENSETEG00000019682	USB1	51	33.803	ENSCSAVG00000000894	-	58	30.000	Ciona_savignyi
ENSETEG00000019682	USB1	91	69.421	ENSCANG00000037135	USB1	100	69.288	Colobus_angolensis_palliatus
ENSETEG00000019682	USB1	100	69.030	ENSCGRG00001011243	USB1	100	69.030	Cricetulus_griseus_chok1gshd
ENSETEG00000019682	USB1	100	69.030	ENSCGRG00000013252	USB1	100	69.030	Cricetulus_griseus_crigri
ENSETEG00000019682	USB1	98	40.000	ENSCSEG00000013881	usb1	99	40.000	Cynoglossus_semilaevis
ENSETEG00000019682	USB1	84	42.544	ENSCVAG00000009252	usb1	97	42.982	Cyprinodon_variegatus
ENSETEG00000019682	USB1	90	39.331	ENSDARG00000003841	usb1	99	37.276	Danio_rerio
ENSETEG00000019682	USB1	100	65.918	ENSDORG00000001888	Usb1	100	65.918	Dipodomys_ordii
ENSETEG00000019682	USB1	53	37.241	FBgn0037713	CG16790	75	32.143	Drosophila_melanogaster
ENSETEG00000019682	USB1	83	45.946	ENSEBUG00000005889	usb1	78	45.946	Eptatretus_burgeri
ENSETEG00000019682	USB1	100	71.536	ENSEASG00005005484	USB1	100	71.536	Equus_asinus_asinus
ENSETEG00000019682	USB1	100	71.536	ENSECAG00000019493	USB1	91	71.536	Equus_caballus
ENSETEG00000019682	USB1	65	58.960	ENSEEUG00000000154	USB1	65	58.960	Erinaceus_europaeus
ENSETEG00000019682	USB1	87	42.308	ENSELUG00000010974	usb1	99	39.568	Esox_lucius
ENSETEG00000019682	USB1	100	71.536	ENSFCAG00000002693	USB1	100	71.536	Felis_catus
ENSETEG00000019682	USB1	100	50.187	ENSFALG00000006876	USB1	99	50.368	Ficedula_albicollis
ENSETEG00000019682	USB1	100	68.539	ENSFDAG00000010052	USB1	100	68.539	Fukomys_damarensis
ENSETEG00000019682	USB1	75	46.977	ENSFHEG00000012334	usb1	86	47.442	Fundulus_heteroclitus
ENSETEG00000019682	USB1	84	43.049	ENSGMOG00000004228	usb1	99	43.049	Gadus_morhua
ENSETEG00000019682	USB1	84	55.357	ENSGALG00000035604	USB1	100	53.358	Gallus_gallus
ENSETEG00000019682	USB1	98	42.029	ENSGAFG00000021890	usb1	99	42.029	Gambusia_affinis
ENSETEG00000019682	USB1	84	44.196	ENSGACG00000003257	usb1	99	41.304	Gasterosteus_aculeatus
ENSETEG00000019682	USB1	100	53.791	ENSGAGG00000022572	USB1	100	53.791	Gopherus_agassizii
ENSETEG00000019682	USB1	100	69.663	ENSGGOG00000017147	USB1	100	69.663	Gorilla_gorilla
ENSETEG00000019682	USB1	94	43.028	ENSHBUG00000009823	usb1	99	41.343	Haplochromis_burtoni
ENSETEG00000019682	USB1	100	68.165	ENSHGLG00000016078	USB1	98	68.165	Heterocephalus_glaber_female
ENSETEG00000019682	USB1	100	68.165	ENSHGLG00100005562	USB1	98	68.165	Heterocephalus_glaber_male
ENSETEG00000019682	USB1	98	43.295	ENSHCOG00000015633	usb1	99	43.295	Hippocampus_comes
ENSETEG00000019682	USB1	94	43.426	ENSIPUG00000008601	usb1	87	43.426	Ictalurus_punctatus
ENSETEG00000019682	USB1	100	67.766	ENSSTOG00000007548	USB1	100	67.766	Ictidomys_tridecemlineatus
ENSETEG00000019682	USB1	100	71.161	ENSJJAG00000021859	Usb1	100	71.161	Jaculus_jaculus
ENSETEG00000019682	USB1	85	43.172	ENSKMAG00000007200	usb1	99	40.714	Kryptolebias_marmoratus
ENSETEG00000019682	USB1	61	50.000	ENSLBEG00000008452	usb1	55	50.000	Labrus_bergylta
ENSETEG00000019682	USB1	72	53.731	ENSLACG00000000105	USB1	76	52.968	Latimeria_chalumnae
ENSETEG00000019682	USB1	94	46.640	ENSLOCG00000000465	usb1	99	44.561	Lepisosteus_oculatus
ENSETEG00000019682	USB1	100	57.934	ENSLAFG00000002267	USB1	100	56.475	Loxodonta_africana
ENSETEG00000019682	USB1	100	70.037	ENSMFAG00000003926	USB1	96	75.817	Macaca_fascicularis
ENSETEG00000019682	USB1	100	70.037	ENSMMUG00000022669	USB1	94	76.871	Macaca_mulatta
ENSETEG00000019682	USB1	100	69.663	ENSMNEG00000042487	USB1	96	75.817	Macaca_nemestrina
ENSETEG00000019682	USB1	100	70.037	ENSMLEG00000028756	USB1	96	75.817	Mandrillus_leucophaeus
ENSETEG00000019682	USB1	98	42.086	ENSMAMG00000015092	usb1	99	42.086	Mastacembelus_armatus
ENSETEG00000019682	USB1	94	42.629	ENSMZEG00005010008	usb1	99	41.577	Maylandia_zebra
ENSETEG00000019682	USB1	100	67.041	ENSMAUG00000007832	Usb1	100	67.041	Mesocricetus_auratus
ENSETEG00000019682	USB1	100	70.037	ENSMICG00000004900	USB1	96	75.817	Microcebus_murinus
ENSETEG00000019682	USB1	100	65.918	ENSMOCG00000022647	Usb1	100	65.918	Microtus_ochrogaster
ENSETEG00000019682	USB1	85	43.805	ENSMMOG00000000490	usb1	99	42.366	Mola_mola
ENSETEG00000019682	USB1	100	56.618	ENSMODG00000014067	USB1	100	56.618	Monodelphis_domestica
ENSETEG00000019682	USB1	95	41.732	ENSMALG00000005930	usb1	99	41.053	Monopterus_albus
ENSETEG00000019682	USB1	100	66.292	MGP_CAROLIEiJ_G0031421	Usb1	100	76.106	Mus_caroli
ENSETEG00000019682	USB1	100	67.416	ENSMUSG00000031792	Usb1	100	77.876	Mus_musculus
ENSETEG00000019682	USB1	100	67.790	MGP_PahariEiJ_G0023019	Usb1	100	79.487	Mus_pahari
ENSETEG00000019682	USB1	100	66.667	MGP_SPRETEiJ_G0032540	Usb1	100	66.667	Mus_spretus
ENSETEG00000019682	USB1	100	68.401	ENSMPUG00000004684	USB1	96	68.773	Mustela_putorius_furo
ENSETEG00000019682	USB1	87	71.429	ENSMLUG00000007400	USB1	100	71.429	Myotis_lucifugus
ENSETEG00000019682	USB1	100	70.632	ENSNGAG00000009703	Usb1	100	70.632	Nannospalax_galili
ENSETEG00000019682	USB1	94	37.945	ENSNBRG00000008747	usb1	99	43.458	Neolamprologus_brichardi
ENSETEG00000019682	USB1	94	69.048	ENSNLEG00000003340	USB1	95	75.000	Nomascus_leucogenys
ENSETEG00000019682	USB1	63	81.818	ENSOPRG00000011803	USB1	72	81.818	Ochotona_princeps
ENSETEG00000019682	USB1	100	66.292	ENSODEG00000016214	USB1	100	66.292	Octodon_degus
ENSETEG00000019682	USB1	98	41.696	ENSONIG00000011063	usb1	99	41.696	Oreochromis_niloticus
ENSETEG00000019682	USB1	85	59.825	ENSOANG00000012118	USB1	95	59.825	Ornithorhynchus_anatinus
ENSETEG00000019682	USB1	84	42.411	ENSORLG00000012479	usb1	99	39.338	Oryzias_latipes
ENSETEG00000019682	USB1	84	42.857	ENSORLG00020018671	usb1	99	38.889	Oryzias_latipes_hni
ENSETEG00000019682	USB1	84	42.411	ENSORLG00015009679	usb1	99	38.662	Oryzias_latipes_hsok
ENSETEG00000019682	USB1	96	39.300	ENSOMEG00000012930	usb1	99	39.855	Oryzias_melastigma
ENSETEG00000019682	USB1	100	64.419	ENSOGAG00000003273	USB1	100	64.419	Otolemur_garnettii
ENSETEG00000019682	USB1	90	69.295	ENSOARG00000001107	USB1	92	69.295	Ovis_aries
ENSETEG00000019682	USB1	100	70.037	ENSPPAG00000042137	USB1	95	75.658	Pan_paniscus
ENSETEG00000019682	USB1	100	70.787	ENSPPRG00000024797	USB1	100	70.787	Panthera_pardus
ENSETEG00000019682	USB1	100	71.161	ENSPTIG00000007506	USB1	100	71.161	Panthera_tigris_altaica
ENSETEG00000019682	USB1	100	64.045	ENSPTRG00000008172	USB1	100	71.028	Pan_troglodytes
ENSETEG00000019682	USB1	100	70.037	ENSPANG00000025138	USB1	96	75.817	Papio_anubis
ENSETEG00000019682	USB1	98	43.893	ENSPKIG00000015109	usb1	99	42.034	Paramormyrops_kingsleyae
ENSETEG00000019682	USB1	84	48.052	ENSPSIG00000004305	USB1	100	48.052	Pelodiscus_sinensis
ENSETEG00000019682	USB1	84	42.667	ENSPMGG00000017725	usb1	98	40.996	Periophthalmus_magnuspinnatus
ENSETEG00000019682	USB1	100	66.544	ENSPEMG00000016183	Usb1	100	66.912	Peromyscus_maniculatus_bairdii
ENSETEG00000019682	USB1	87	46.809	ENSPMAG00000000462	usb1	99	46.809	Petromyzon_marinus
ENSETEG00000019682	USB1	98	41.877	ENSPFOG00000011130	usb1	99	41.877	Poecilia_formosa
ENSETEG00000019682	USB1	98	42.238	ENSPLAG00000009820	usb1	99	42.238	Poecilia_latipinna
ENSETEG00000019682	USB1	98	41.877	ENSPMEG00000006402	usb1	99	41.877	Poecilia_mexicana
ENSETEG00000019682	USB1	75	46.977	ENSPREG00000001047	usb1	87	47.907	Poecilia_reticulata
ENSETEG00000019682	USB1	95	66.142	ENSPPYG00000007401	USB1	100	66.142	Pongo_abelii
ENSETEG00000019682	USB1	100	70.037	ENSPCOG00000022612	USB1	96	75.163	Propithecus_coquereli
ENSETEG00000019682	USB1	100	70.037	ENSPVAG00000004613	USB1	100	70.037	Pteropus_vampyrus
ENSETEG00000019682	USB1	94	43.028	ENSPNYG00000022262	usb1	99	41.343	Pundamilia_nyererei
ENSETEG00000019682	USB1	90	42.259	ENSPNAG00000011736	usb1	99	39.249	Pygocentrus_nattereri
ENSETEG00000019682	USB1	100	67.416	ENSRNOG00000013216	Usb1	100	67.416	Rattus_norvegicus
ENSETEG00000019682	USB1	100	64.794	ENSRBIG00000044466	USB1	100	71.495	Rhinopithecus_bieti
ENSETEG00000019682	USB1	100	70.037	ENSRROG00000029211	USB1	96	75.163	Rhinopithecus_roxellana
ENSETEG00000019682	USB1	100	68.914	ENSSBOG00000029362	USB1	95	74.342	Saimiri_boliviensis_boliviensis
ENSETEG00000019682	USB1	82	59.361	ENSSHAG00000006993	USB1	99	56.299	Sarcophilus_harrisii
ENSETEG00000019682	USB1	99	43.939	ENSSFOG00015023663	usb1	79	43.939	Scleropages_formosus
ENSETEG00000019682	USB1	97	42.125	ENSSMAG00000015834	usb1	99	41.356	Scophthalmus_maximus
ENSETEG00000019682	USB1	85	46.018	ENSSDUG00000002949	usb1	99	43.284	Seriola_dumerili
ENSETEG00000019682	USB1	95	43.083	ENSSLDG00000014174	usb1	99	41.935	Seriola_lalandi_dorsalis
ENSETEG00000019682	USB1	80	53.738	ENSSPUG00000006741	USB1	100	53.738	Sphenodon_punctatus
ENSETEG00000019682	USB1	98	39.929	ENSSPAG00000007484	usb1	99	40.070	Stegastes_partitus
ENSETEG00000019682	USB1	100	68.773	ENSSSCG00000002807	USB1	100	68.773	Sus_scrofa
ENSETEG00000019682	USB1	79	55.660	ENSTGUG00000004792	USB1	99	52.434	Taeniopygia_guttata
ENSETEG00000019682	USB1	98	41.264	ENSTRUG00000021069	usb1	99	41.264	Takifugu_rubripes
ENSETEG00000019682	USB1	98	39.326	ENSTNIG00000000626	usb1	98	39.326	Tetraodon_nigroviridis
ENSETEG00000019682	USB1	63	78.788	ENSTBEG00000001507	USB1	72	78.788	Tupaia_belangeri
ENSETEG00000019682	USB1	100	69.145	ENSUAMG00000016823	USB1	100	69.888	Ursus_americanus
ENSETEG00000019682	USB1	80	70.093	ENSUMAG00000021369	USB1	100	70.093	Ursus_maritimus
ENSETEG00000019682	USB1	77	56.098	ENSVPAG00000009834	-	100	56.098	Vicugna_pacos
ENSETEG00000019682	USB1	99	67.164	ENSVVUG00000023700	USB1	93	67.635	Vulpes_vulpes
ENSETEG00000019682	USB1	81	47.248	ENSXETG00000013795	usb1	99	45.420	Xenopus_tropicalis
ENSETEG00000019682	USB1	96	42.248	ENSXMAG00000024687	usb1	80	41.026	Xiphophorus_maculatus