EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000020249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 1482 bases
Position: chrscaffold_214783:5856-7337
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	1	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	2	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	3	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	4	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	5	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	6	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	7	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	8	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	9	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	10	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	11	12
ENSETEP00000016451	zf-C2H2	PF00096.26	1.1e-64	12	12
ENSETEP00000016451	zf-met	PF12874.7	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000020249	-	1482	-	ENSETEP00000016451	494 (aa)	-	UPI0000E40004

Gene Model

Click here to download ENSETEG00000020249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000020249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000020249	-	71	46.032	ENSETEG00000001481	SALL3	63	46.032
ENSETEG00000020249	-	88	54.808	ENSETEG00000011456	-	64	54.808
ENSETEG00000020249	-	84	53.374	ENSETEG00000006796	-	82	53.374
ENSETEG00000020249	-	80	40.625	ENSETEG00000016371	-	96	40.625
ENSETEG00000020249	-	89	45.767	ENSETEG00000001475	-	87	45.767
ENSETEG00000020249	-	88	47.804	ENSETEG00000016741	-	84	47.804
ENSETEG00000020249	-	84	42.754	ENSETEG00000013682	-	72	41.600
ENSETEG00000020249	-	75	33.846	ENSETEG00000005777	-	53	33.333
ENSETEG00000020249	-	75	41.558	ENSETEG00000015150	SALL1	58	41.558
ENSETEG00000020249	-	78	33.818	ENSETEG00000017049	ZNF526	90	31.606
ENSETEG00000020249	-	84	55.914	ENSETEG00000018345	ZNF768	51	55.914
ENSETEG00000020249	-	90	42.241	ENSETEG00000020268	PRDM5	66	42.241
ENSETEG00000020249	-	88	57.500	ENSETEG00000015836	ZNF865	62	38.889
ENSETEG00000020249	-	87	43.149	ENSETEG00000008973	-	95	43.149
ENSETEG00000020249	-	81	38.528	ENSETEG00000017621	-	52	41.573
ENSETEG00000020249	-	89	40.640	ENSETEG00000003195	-	94	41.602
ENSETEG00000020249	-	90	43.377	ENSETEG00000002865	-	81	43.377
ENSETEG00000020249	-	88	46.505	ENSETEG00000008765	-	94	46.505
ENSETEG00000020249	-	87	44.954	ENSETEG00000018209	-	74	52.294
ENSETEG00000020249	-	95	50.207	ENSETEG00000014225	-	100	50.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000020249	-	100	86.720	ENSCAFG00020003589	-	98	86.720	Canis_lupus_dingo
ENSETEG00000020249	-	99	81.947	ENSTSYG00000008405	-	85	81.947	Carlito_syrichta
ENSETEG00000020249	-	97	81.612	ENSCAPG00000013118	-	83	89.817	Cavia_aperea
ENSETEG00000020249	-	100	74.257	ENSCPOG00000034791	-	80	74.257	Cavia_porcellus
ENSETEG00000020249	-	99	80.162	ENSCLAG00000014648	-	90	80.162	Chinchilla_lanigera
ENSETEG00000020249	-	100	84.168	ENSCHOG00000008173	-	86	84.168	Choloepus_hoffmanni
ENSETEG00000020249	-	88	95.333	ENSCHOG00000003898	-	100	95.333	Choloepus_hoffmanni
ENSETEG00000020249	-	99	79.757	ENSCGRG00001021088	Zfp354a	84	79.757	Cricetulus_griseus_chok1gshd
ENSETEG00000020249	-	99	79.757	ENSCGRG00000015037	Zfp354a	84	79.757	Cricetulus_griseus_crigri
ENSETEG00000020249	-	87	95.095	ENSDNOG00000043806	-	100	95.095	Dasypus_novemcinctus
ENSETEG00000020249	-	99	81.377	ENSDORG00000009396	Zfp354a	87	81.377	Dipodomys_ordii
ENSETEG00000020249	-	100	84.008	ENSEEUG00000008362	-	100	84.008	Erinaceus_europaeus
ENSETEG00000020249	-	99	78.745	ENSFDAG00000015190	-	80	78.745	Fukomys_damarensis
ENSETEG00000020249	-	100	78.357	ENSHGLG00000005975	-	85	78.357	Heterocephalus_glaber_female
ENSETEG00000020249	-	99	78.745	ENSHGLG00100012284	-	99	78.745	Heterocephalus_glaber_male
ENSETEG00000020249	-	100	84.032	ENSSTOG00000024118	-	97	81.038	Ictidomys_tridecemlineatus
ENSETEG00000020249	-	99	91.376	ENSLAFG00000002909	-	100	91.376	Loxodonta_africana
ENSETEG00000020249	-	99	78.990	ENSMAUG00000000735	Zfp354a	92	78.990	Mesocricetus_auratus
ENSETEG00000020249	-	100	83.768	ENSMICG00000006390	ZNF354A	86	83.768	Microcebus_murinus
ENSETEG00000020249	-	99	78.252	ENSMOCG00000003692	Zfp354a	89	78.252	Microtus_ochrogaster
ENSETEG00000020249	-	99	78.615	MGP_CAROLIEiJ_G0016306	Zfp354a	84	78.615	Mus_caroli
ENSETEG00000020249	-	99	78.208	ENSMUSG00000020364	Zfp354a	84	78.208	Mus_musculus
ENSETEG00000020249	-	99	78.004	MGP_PahariEiJ_G0017441	Zfp354a	84	78.004	Mus_pahari
ENSETEG00000020249	-	100	79.960	ENSNGAG00000011769	Zfp354a	82	79.960	Nannospalax_galili
ENSETEG00000020249	-	100	81.764	ENSODEG00000008278	-	95	78.557	Octodon_degus
ENSETEG00000020249	-	99	86.437	ENSPPAG00000039371	ZNF354A	87	86.437	Pan_paniscus
ENSETEG00000020249	-	99	86.842	ENSPTRG00000017606	ZNF354A	94	86.789	Pan_troglodytes
ENSETEG00000020249	-	99	78.340	ENSPEMG00000024167	Zfp354a	84	78.340	Peromyscus_maniculatus_bairdii
ENSETEG00000020249	-	100	79.477	ENSUAMG00000000212	-	86	79.477	Ursus_americanus