EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000020268 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 245169 bases
Position: chrGeneScaffold_4156:17879-263047
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	1	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	2	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	3	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	4	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	5	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	6	7
ENSETEP00000016463	zf-C2H2	PF00096.26	1.8e-43	7	7
ENSETEP00000016463	zf-met	PF12874.7	3.9e-21	1	4
ENSETEP00000016463	zf-met	PF12874.7	3.9e-21	2	4
ENSETEP00000016463	zf-met	PF12874.7	3.9e-21	3	4
ENSETEP00000016463	zf-met	PF12874.7	3.9e-21	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000020267	PRDM5-201	1800	-	ENSETEP00000016463	599 (aa)	-	UPI0000E4203A

Gene Model

Click here to download ENSETEG00000020268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000020268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000020268	PRDM5	56	40.367	ENSETEG00000016371	-	88	40.367
ENSETEG00000020268	PRDM5	67	31.889	ENSETEG00000008765	-	81	30.909
ENSETEG00000020268	PRDM5	67	33.129	ENSETEG00000003195	-	85	33.333
ENSETEG00000020268	PRDM5	64	30.675	ENSETEG00000005777	-	51	30.675
ENSETEG00000020268	PRDM5	66	42.241	ENSETEG00000020249	-	90	42.241
ENSETEG00000020268	PRDM5	66	42.105	ENSETEG00000011456	-	61	42.105
ENSETEG00000020268	PRDM5	64	33.766	ENSETEG00000008973	-	96	33.766
ENSETEG00000020268	PRDM5	66	31.701	ENSETEG00000016741	-	60	31.926
ENSETEG00000020268	PRDM5	67	30.645	ENSETEG00000014225	-	99	30.645
ENSETEG00000020268	PRDM5	67	41.964	ENSETEG00000018209	-	63	41.964
ENSETEG00000020268	PRDM5	65	42.982	ENSETEG00000006796	-	71	42.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000020268	PRDM5	90	85.827	ENSG00000138738	PRDM5	93	85.827	Homo_sapiens
ENSETEG00000020268	PRDM5	84	81.720	ENSAPOG00000023220	prdm5	93	80.000	Acanthochromis_polyacanthus
ENSETEG00000020268	PRDM5	96	69.097	ENSAMEG00000003050	PRDM5	100	69.271	Ailuropoda_melanoleuca
ENSETEG00000020268	PRDM5	84	69.892	ENSACIG00000000406	prdm5	93	69.524	Amphilophus_citrinellus
ENSETEG00000020268	PRDM5	84	81.720	ENSAOCG00000014806	prdm5	91	80.000	Amphiprion_ocellaris
ENSETEG00000020268	PRDM5	83	81.720	ENSAPEG00000016846	prdm5	91	80.000	Amphiprion_percula
ENSETEG00000020268	PRDM5	84	81.720	ENSATEG00000013829	prdm5	95	69.841	Anabas_testudineus
ENSETEG00000020268	PRDM5	90	75.000	ENSAPLG00000013828	PRDM5	98	75.000	Anas_platyrhynchos
ENSETEG00000020268	PRDM5	85	69.976	ENSACAG00000012999	PRDM5	92	58.503	Anolis_carolinensis
ENSETEG00000020268	PRDM5	90	85.827	ENSANAG00000027411	PRDM5	88	98.291	Aotus_nancymaae
ENSETEG00000020268	PRDM5	84	82.796	ENSACLG00000017996	prdm5	93	80.952	Astatotilapia_calliptera
ENSETEG00000020268	PRDM5	74	78.788	ENSAMXG00000041864	prdm5	95	73.171	Astyanax_mexicanus
ENSETEG00000020268	PRDM5	100	74.124	ENSBTAG00000012111	PRDM5	95	74.124	Bos_taurus
ENSETEG00000020268	PRDM5	90	86.614	ENSCJAG00000003133	PRDM5	93	92.754	Callithrix_jacchus
ENSETEG00000020268	PRDM5	84	76.087	ENSCAFG00000004179	PRDM5	97	76.087	Canis_familiaris
ENSETEG00000020268	PRDM5	90	87.402	ENSCAFG00020017685	PRDM5	94	87.402	Canis_lupus_dingo
ENSETEG00000020268	PRDM5	88	92.105	ENSCHIG00000018772	PRDM5	94	92.105	Capra_hircus
ENSETEG00000020268	PRDM5	90	85.827	ENSTSYG00000009630	PRDM5	94	85.827	Carlito_syrichta
ENSETEG00000020268	PRDM5	70	98.291	ENSCAPG00000015217	PRDM5	100	98.291	Cavia_aperea
ENSETEG00000020268	PRDM5	90	87.402	ENSCPOG00000012883	PRDM5	100	98.291	Cavia_porcellus
ENSETEG00000020268	PRDM5	90	85.827	ENSCCAG00000023157	PRDM5	88	98.291	Cebus_capucinus
ENSETEG00000020268	PRDM5	90	86.614	ENSCATG00000042510	PRDM5	88	98.291	Cercocebus_atys
ENSETEG00000020268	PRDM5	90	87.402	ENSCLAG00000005392	PRDM5	100	98.291	Chinchilla_lanigera
ENSETEG00000020268	PRDM5	90	87.402	ENSCSAG00000003729	PRDM5	93	87.402	Chlorocebus_sabaeus
ENSETEG00000020268	PRDM5	100	88.112	ENSCHOG00000007801	PRDM5	86	88.112	Choloepus_hoffmanni
ENSETEG00000020268	PRDM5	88	80.702	ENSCPBG00000024735	PRDM5	90	80.702	Chrysemys_picta_bellii
ENSETEG00000020268	PRDM5	90	85.827	ENSCANG00000036807	PRDM5	88	98.291	Colobus_angolensis_palliatus
ENSETEG00000020268	PRDM5	80	91.304	ENSCGRG00001010581	Prdm5	93	91.304	Cricetulus_griseus_chok1gshd
ENSETEG00000020268	PRDM5	90	81.250	ENSCGRG00000010996	-	88	81.250	Cricetulus_griseus_crigri
ENSETEG00000020268	PRDM5	85	80.412	ENSCSEG00000019979	prdm5	91	78.095	Cynoglossus_semilaevis
ENSETEG00000020268	PRDM5	84	80.645	ENSCVAG00000013692	prdm5	92	79.048	Cyprinodon_variegatus
ENSETEG00000020268	PRDM5	85	83.505	ENSDARG00000006288	prdm5	90	81.553	Danio_rerio
ENSETEG00000020268	PRDM5	96	73.868	ENSDNOG00000002009	PRDM5	100	73.868	Dasypus_novemcinctus
ENSETEG00000020268	PRDM5	80	94.203	ENSDORG00000007739	Prdm5	93	94.203	Dipodomys_ordii
ENSETEG00000020268	PRDM5	83	70.526	ENSEBUG00000004301	prdm5	90	68.000	Eptatretus_burgeri
ENSETEG00000020268	PRDM5	90	88.976	ENSEASG00005018365	PRDM5	88	99.145	Equus_asinus_asinus
ENSETEG00000020268	PRDM5	80	86.364	ENSECAG00000024747	-	92	86.364	Equus_caballus
ENSETEG00000020268	PRDM5	90	88.976	ENSECAG00000011516	PRDM5	84	88.976	Equus_caballus
ENSETEG00000020268	PRDM5	89	85.714	ENSEEUG00000010306	PRDM5	79	85.714	Erinaceus_europaeus
ENSETEG00000020268	PRDM5	85	80.412	ENSELUG00000005894	prdm5	84	73.684	Esox_lucius
ENSETEG00000020268	PRDM5	90	87.402	ENSFCAG00000025656	PRDM5	94	87.402	Felis_catus
ENSETEG00000020268	PRDM5	56	76.562	ENSFALG00000008381	PRDM5	88	76.562	Ficedula_albicollis
ENSETEG00000020268	PRDM5	90	88.189	ENSFDAG00000021361	PRDM5	93	94.203	Fukomys_damarensis
ENSETEG00000020268	PRDM5	85	82.474	ENSFHEG00000013040	prdm5	91	80.000	Fundulus_heteroclitus
ENSETEG00000020268	PRDM5	82	76.344	ENSGMOG00000012038	prdm5	93	75.362	Gadus_morhua
ENSETEG00000020268	PRDM5	88	80.702	ENSGALG00000011963	PRDM5	91	80.702	Gallus_gallus
ENSETEG00000020268	PRDM5	85	82.474	ENSGAFG00000019233	prdm5	94	76.316	Gambusia_affinis
ENSETEG00000020268	PRDM5	84	88.660	ENSGAGG00000020362	PRDM5	88	80.870	Gopherus_agassizii
ENSETEG00000020268	PRDM5	90	85.827	ENSGGOG00000013562	PRDM5	88	98.291	Gorilla_gorilla
ENSETEG00000020268	PRDM5	84	82.796	ENSHBUG00000023375	prdm5	92	80.952	Haplochromis_burtoni
ENSETEG00000020268	PRDM5	90	86.614	ENSHGLG00000003010	PRDM5	92	92.754	Heterocephalus_glaber_female
ENSETEG00000020268	PRDM5	90	86.614	ENSHGLG00100003696	PRDM5	88	98.291	Heterocephalus_glaber_male
ENSETEG00000020268	PRDM5	84	81.720	ENSHCOG00000012131	prdm5	88	75.439	Hippocampus_comes
ENSETEG00000020268	PRDM5	85	82.979	ENSIPUG00000001248	prdm5	89	71.774	Ictalurus_punctatus
ENSETEG00000020268	PRDM5	90	81.890	ENSSTOG00000004741	PRDM5	100	93.162	Ictidomys_tridecemlineatus
ENSETEG00000020268	PRDM5	90	80.315	ENSJJAG00000011464	Prdm5	100	97.436	Jaculus_jaculus
ENSETEG00000020268	PRDM5	85	83.505	ENSKMAG00000013663	prdm5	91	80.952	Kryptolebias_marmoratus
ENSETEG00000020268	PRDM5	84	80.645	ENSLBEG00000022736	prdm5	88	74.561	Labrus_bergylta
ENSETEG00000020268	PRDM5	81	85.333	ENSLACG00000009187	PRDM5	99	63.258	Latimeria_chalumnae
ENSETEG00000020268	PRDM5	85	82.474	ENSLOCG00000009778	prdm5	87	74.561	Lepisosteus_oculatus
ENSETEG00000020268	PRDM5	90	89.764	ENSLAFG00000006532	PRDM5	85	89.764	Loxodonta_africana
ENSETEG00000020268	PRDM5	90	86.614	ENSMFAG00000045845	PRDM5	88	98.291	Macaca_fascicularis
ENSETEG00000020268	PRDM5	90	86.614	ENSMMUG00000003249	PRDM5	88	98.291	Macaca_mulatta
ENSETEG00000020268	PRDM5	90	86.614	ENSMNEG00000019018	PRDM5	88	98.291	Macaca_nemestrina
ENSETEG00000020268	PRDM5	90	85.827	ENSMLEG00000023145	PRDM5	99	85.827	Mandrillus_leucophaeus
ENSETEG00000020268	PRDM5	84	82.796	ENSMAMG00000013419	prdm5	88	75.439	Mastacembelus_armatus
ENSETEG00000020268	PRDM5	84	82.796	ENSMZEG00005020645	prdm5	92	80.952	Maylandia_zebra
ENSETEG00000020268	PRDM5	90	74.219	ENSMGAG00000010710	PRDM5	98	74.219	Meleagris_gallopavo
ENSETEG00000020268	PRDM5	90	82.677	ENSMAUG00000006768	Prdm5	93	91.304	Mesocricetus_auratus
ENSETEG00000020268	PRDM5	89	85.366	ENSMICG00000001459	PRDM5	88	98.291	Microcebus_murinus
ENSETEG00000020268	PRDM5	90	82.677	ENSMOCG00000016267	Prdm5	93	91.304	Microtus_ochrogaster
ENSETEG00000020268	PRDM5	85	81.443	ENSMMOG00000006035	prdm5	92	79.048	Mola_mola
ENSETEG00000020268	PRDM5	85	79.381	ENSMODG00000018942	PRDM5	94	68.800	Monodelphis_domestica
ENSETEG00000020268	PRDM5	83	83.158	ENSMALG00000013934	prdm5	95	76.068	Monopterus_albus
ENSETEG00000020268	PRDM5	90	83.465	MGP_CAROLIEiJ_G0028463	Prdm5	93	91.304	Mus_caroli
ENSETEG00000020268	PRDM5	90	83.465	ENSMUSG00000029913	Prdm5	93	91.304	Mus_musculus
ENSETEG00000020268	PRDM5	89	84.000	MGP_PahariEiJ_G0022203	Prdm5	93	91.304	Mus_pahari
ENSETEG00000020268	PRDM5	90	83.465	MGP_SPRETEiJ_G0029467	Prdm5	93	91.304	Mus_spretus
ENSETEG00000020268	PRDM5	100	74.290	ENSMPUG00000017415	PRDM5	95	74.290	Mustela_putorius_furo
ENSETEG00000020268	PRDM5	84	80.682	ENSMLUG00000006097	PRDM5	96	80.682	Myotis_lucifugus
ENSETEG00000020268	PRDM5	80	89.855	ENSNGAG00000018317	Prdm5	88	95.726	Nannospalax_galili
ENSETEG00000020268	PRDM5	84	82.796	ENSNBRG00000004976	prdm5	93	80.952	Neolamprologus_brichardi
ENSETEG00000020268	PRDM5	90	85.039	ENSNLEG00000009107	PRDM5	88	98.291	Nomascus_leucogenys
ENSETEG00000020268	PRDM5	74	89.286	ENSMEUG00000006576	-	65	89.286	Notamacropus_eugenii
ENSETEG00000020268	PRDM5	90	68.731	ENSOPRG00000011066	-	79	68.731	Ochotona_princeps
ENSETEG00000020268	PRDM5	80	91.304	ENSODEG00000009133	PRDM5	89	98.291	Octodon_degus
ENSETEG00000020268	PRDM5	84	82.796	ENSONIG00000003111	prdm5	85	80.952	Oreochromis_niloticus
ENSETEG00000020268	PRDM5	86	74.790	ENSOANG00000015109	PRDM5	87	74.790	Ornithorhynchus_anatinus
ENSETEG00000020268	PRDM5	98	66.440	ENSOCUG00000013454	PRDM5	100	67.632	Oryctolagus_cuniculus
ENSETEG00000020268	PRDM5	84	80.645	ENSORLG00000016247	prdm5	86	79.048	Oryzias_latipes
ENSETEG00000020268	PRDM5	84	81.720	ENSORLG00020018051	prdm5	91	80.952	Oryzias_latipes_hni
ENSETEG00000020268	PRDM5	84	80.645	ENSORLG00015013760	prdm5	86	79.048	Oryzias_latipes_hsok
ENSETEG00000020268	PRDM5	84	82.796	ENSOMEG00000005143	prdm5	83	81.905	Oryzias_melastigma
ENSETEG00000020268	PRDM5	89	67.232	ENSOGAG00000009996	PRDM5	98	66.916	Otolemur_garnettii
ENSETEG00000020268	PRDM5	88	92.105	ENSOARG00000015473	PRDM5	85	92.105	Ovis_aries
ENSETEG00000020268	PRDM5	90	85.827	ENSPPAG00000043045	PRDM5	99	85.827	Pan_paniscus
ENSETEG00000020268	PRDM5	90	87.402	ENSPPRG00000001020	PRDM5	90	87.402	Panthera_pardus
ENSETEG00000020268	PRDM5	90	87.402	ENSPTIG00000010807	PRDM5	89	87.402	Panthera_tigris_altaica
ENSETEG00000020268	PRDM5	90	85.039	ENSPTRG00000016403	PRDM5	88	98.291	Pan_troglodytes
ENSETEG00000020268	PRDM5	90	86.614	ENSPANG00000023612	PRDM5	88	98.291	Papio_anubis
ENSETEG00000020268	PRDM5	85	88.034	ENSPKIG00000015492	prdm5	83	79.091	Paramormyrops_kingsleyae
ENSETEG00000020268	PRDM5	88	80.702	ENSPSIG00000013505	PRDM5	91	80.702	Pelodiscus_sinensis
ENSETEG00000020268	PRDM5	84	81.720	ENSPMGG00000012622	prdm5	94	75.439	Periophthalmus_magnuspinnatus
ENSETEG00000020268	PRDM5	69	58.172	ENSPMAG00000005248	prdm5	100	58.172	Petromyzon_marinus
ENSETEG00000020268	PRDM5	77	82.474	ENSPFOG00000018630	prdm5	85	80.000	Poecilia_formosa
ENSETEG00000020268	PRDM5	85	82.474	ENSPLAG00000014148	prdm5	82	80.000	Poecilia_latipinna
ENSETEG00000020268	PRDM5	85	82.474	ENSPMEG00000018002	prdm5	93	80.000	Poecilia_mexicana
ENSETEG00000020268	PRDM5	85	82.474	ENSPREG00000018366	prdm5	93	80.000	Poecilia_reticulata
ENSETEG00000020268	PRDM5	100	73.790	ENSPPYG00000015031	PRDM5	95	73.790	Pongo_abelii
ENSETEG00000020268	PRDM5	100	68.421	ENSPCAG00000011671	PRDM5	100	68.421	Procavia_capensis
ENSETEG00000020268	PRDM5	80	92.754	ENSPCOG00000022828	PRDM5	88	98.291	Propithecus_coquereli
ENSETEG00000020268	PRDM5	90	76.800	ENSPVAG00000012309	PRDM5	90	76.800	Pteropus_vampyrus
ENSETEG00000020268	PRDM5	84	82.796	ENSPNYG00000012194	prdm5	93	80.952	Pundamilia_nyererei
ENSETEG00000020268	PRDM5	83	81.176	ENSPNAG00000023191	-	95	77.419	Pygocentrus_nattereri
ENSETEG00000020268	PRDM5	85	83.505	ENSPNAG00000026181	prdm5	90	80.000	Pygocentrus_nattereri
ENSETEG00000020268	PRDM5	90	84.252	ENSRNOG00000023679	Prdm5	94	84.252	Rattus_norvegicus
ENSETEG00000020268	PRDM5	90	86.614	ENSRBIG00000041307	PRDM5	88	98.291	Rhinopithecus_bieti
ENSETEG00000020268	PRDM5	90	86.614	ENSRROG00000035343	PRDM5	99	86.614	Rhinopithecus_roxellana
ENSETEG00000020268	PRDM5	90	86.614	ENSSBOG00000022100	PRDM5	93	94.203	Saimiri_boliviensis_boliviensis
ENSETEG00000020268	PRDM5	80	82.857	ENSSHAG00000003250	PRDM5	99	53.398	Sarcophilus_harrisii
ENSETEG00000020268	PRDM5	85	79.381	ENSSFOG00015020478	prdm5	81	77.143	Scleropages_formosus
ENSETEG00000020268	PRDM5	85	83.505	ENSSMAG00000018844	prdm5	93	76.316	Scophthalmus_maximus
ENSETEG00000020268	PRDM5	85	83.505	ENSSDUG00000020397	prdm5	93	76.316	Seriola_dumerili
ENSETEG00000020268	PRDM5	85	83.505	ENSSLDG00000013353	prdm5	93	76.316	Seriola_lalandi_dorsalis
ENSETEG00000020268	PRDM5	100	97.436	ENSSARG00000014129	-	80	97.436	Sorex_araneus
ENSETEG00000020268	PRDM5	85	85.567	ENSSPUG00000009941	PRDM5	88	88.889	Sphenodon_punctatus
ENSETEG00000020268	PRDM5	84	81.720	ENSSPAG00000013866	prdm5	87	80.000	Stegastes_partitus
ENSETEG00000020268	PRDM5	90	85.827	ENSSSCG00000009101	PRDM5	85	85.827	Sus_scrofa
ENSETEG00000020268	PRDM5	88	81.579	ENSTGUG00000001920	PRDM5	96	81.579	Taeniopygia_guttata
ENSETEG00000020268	PRDM5	84	79.570	ENSTRUG00000013850	prdm5	91	79.048	Takifugu_rubripes
ENSETEG00000020268	PRDM5	87	75.000	ENSTNIG00000005901	prdm5	83	75.000	Tetraodon_nigroviridis
ENSETEG00000020268	PRDM5	100	74.247	ENSTBEG00000015386	PRDM5	85	88.827	Tupaia_belangeri
ENSETEG00000020268	PRDM5	100	73.790	ENSTTRG00000010996	PRDM5	95	73.790	Tursiops_truncatus
ENSETEG00000020268	PRDM5	88	88.189	ENSUAMG00000009994	PRDM5	84	88.189	Ursus_americanus
ENSETEG00000020268	PRDM5	90	88.189	ENSUMAG00000003733	PRDM5	99	92.754	Ursus_maritimus
ENSETEG00000020268	PRDM5	100	75.960	ENSVPAG00000007435	PRDM5	98	75.960	Vicugna_pacos
ENSETEG00000020268	PRDM5	98	74.446	ENSVVUG00000013192	PRDM5	100	74.446	Vulpes_vulpes
ENSETEG00000020268	PRDM5	85	83.505	ENSXETG00000002101	prdm5	95	62.833	Xenopus_tropicalis
ENSETEG00000020268	PRDM5	85	82.474	ENSXCOG00000008567	prdm5	94	76.316	Xiphophorus_couchianus
ENSETEG00000020268	PRDM5	85	82.474	ENSXMAG00000013825	prdm5	94	76.316	Xiphophorus_maculatus