EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000020389 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 37131 bases
Position: chrGeneScaffold_2732:54116-91246
Accession: 101642080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000016569	PRP4	PF08799.11	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000020389	PRPF4-201	1572	-	ENSETEP00000016569	523 (aa)	XP_004712589	UPI0000E42F59

Gene Model

Click here to download ENSETEG00000020389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000020389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000020389	PRPF4	100	97.323	ENSG00000136875	PRPF4	100	97.323	Homo_sapiens
ENSETEG00000020389	PRPF4	96	78.033	ENSAPOG00000014132	prpf4	98	78.033	Acanthochromis_polyacanthus
ENSETEG00000020389	PRPF4	100	97.323	ENSAMEG00000013048	PRPF4	98	97.323	Ailuropoda_melanoleuca
ENSETEG00000020389	PRPF4	96	77.778	ENSACIG00000005579	prpf4	99	77.778	Amphilophus_citrinellus
ENSETEG00000020389	PRPF4	96	77.426	ENSAOCG00000005457	prpf4	99	77.426	Amphiprion_ocellaris
ENSETEG00000020389	PRPF4	96	77.228	ENSAPEG00000000776	prpf4	99	77.228	Amphiprion_percula
ENSETEG00000020389	PRPF4	96	76.786	ENSATEG00000023013	prpf4	99	76.786	Anabas_testudineus
ENSETEG00000020389	PRPF4	98	89.689	ENSAPLG00000006534	PRPF4	96	89.689	Anas_platyrhynchos
ENSETEG00000020389	PRPF4	100	88.571	ENSACAG00000015110	PRPF4	100	88.571	Anolis_carolinensis
ENSETEG00000020389	PRPF4	100	97.514	ENSANAG00000022464	PRPF4	96	97.514	Aotus_nancymaae
ENSETEG00000020389	PRPF4	96	77.579	ENSACLG00000019031	prpf4	99	77.579	Astatotilapia_calliptera
ENSETEG00000020389	PRPF4	97	62.572	ENSAMXG00000006756	prpf4	99	73.861	Astyanax_mexicanus
ENSETEG00000020389	PRPF4	100	97.323	ENSBTAG00000004571	PRPF4	100	97.323	Bos_taurus
ENSETEG00000020389	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSETEG00000020389	PRPF4	100	97.706	ENSCJAG00000017856	PRPF4	100	97.706	Callithrix_jacchus
ENSETEG00000020389	PRPF4	100	97.323	ENSCAFG00000003224	PRPF4	97	97.323	Canis_familiaris
ENSETEG00000020389	PRPF4	100	97.323	ENSCAFG00020022637	PRPF4	100	97.323	Canis_lupus_dingo
ENSETEG00000020389	PRPF4	100	97.706	ENSCHIG00000024648	-	100	97.706	Capra_hircus
ENSETEG00000020389	PRPF4	100	97.514	ENSTSYG00000010366	PRPF4	100	97.514	Carlito_syrichta
ENSETEG00000020389	PRPF4	88	87.828	ENSCAPG00000008935	PRPF4	97	87.828	Cavia_aperea
ENSETEG00000020389	PRPF4	100	90.440	ENSCPOG00000014729	-	100	90.440	Cavia_porcellus
ENSETEG00000020389	PRPF4	100	96.941	ENSCPOG00000010747	-	100	96.941	Cavia_porcellus
ENSETEG00000020389	PRPF4	100	97.323	ENSCCAG00000028990	PRPF4	100	97.323	Cebus_capucinus
ENSETEG00000020389	PRPF4	100	97.323	ENSCATG00000021552	PRPF4	100	97.323	Cercocebus_atys
ENSETEG00000020389	PRPF4	100	97.132	ENSCLAG00000013448	PRPF4	100	97.132	Chinchilla_lanigera
ENSETEG00000020389	PRPF4	86	94.469	ENSCHOG00000007233	PRPF4	100	94.469	Choloepus_hoffmanni
ENSETEG00000020389	PRPF4	99	90.504	ENSCPBG00000019136	PRPF4	74	90.504	Chrysemys_picta_bellii
ENSETEG00000020389	PRPF4	94	59.557	ENSCING00000001299	-	95	58.907	Ciona_intestinalis
ENSETEG00000020389	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.658	Ciona_savignyi
ENSETEG00000020389	PRPF4	100	97.514	ENSCANG00000003246	PRPF4	100	97.514	Colobus_angolensis_palliatus
ENSETEG00000020389	PRPF4	100	97.323	ENSCGRG00001016992	Prpf4	100	97.323	Cricetulus_griseus_chok1gshd
ENSETEG00000020389	PRPF4	100	97.323	ENSCGRG00000017560	Prpf4	100	97.323	Cricetulus_griseus_crigri
ENSETEG00000020389	PRPF4	97	76.238	ENSCSEG00000020451	prpf4	99	76.238	Cynoglossus_semilaevis
ENSETEG00000020389	PRPF4	97	79.010	ENSDARG00000067639	prpf4	99	79.010	Danio_rerio
ENSETEG00000020389	PRPF4	100	97.706	ENSDNOG00000013203	PRPF4	100	97.706	Dasypus_novemcinctus
ENSETEG00000020389	PRPF4	100	97.132	ENSDORG00000026275	Prpf4	100	97.132	Dipodomys_ordii
ENSETEG00000020389	PRPF4	87	56.522	FBgn0036733	U4-U6-60K	99	50.454	Drosophila_melanogaster
ENSETEG00000020389	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSETEG00000020389	PRPF4	100	97.514	ENSEASG00005022678	PRPF4	100	97.514	Equus_asinus_asinus
ENSETEG00000020389	PRPF4	100	98.039	ENSECAG00000007072	PRPF4	100	97.514	Equus_caballus
ENSETEG00000020389	PRPF4	100	77.560	ENSEEUG00000007480	PRPF4	100	77.560	Erinaceus_europaeus
ENSETEG00000020389	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSETEG00000020389	PRPF4	100	97.706	ENSFCAG00000005514	PRPF4	100	97.706	Felis_catus
ENSETEG00000020389	PRPF4	97	87.640	ENSFALG00000005423	PRPF4	90	85.161	Ficedula_albicollis
ENSETEG00000020389	PRPF4	100	96.941	ENSFDAG00000005839	PRPF4	100	96.941	Fukomys_damarensis
ENSETEG00000020389	PRPF4	96	76.786	ENSFHEG00000001300	prpf4	99	76.786	Fundulus_heteroclitus
ENSETEG00000020389	PRPF4	98	89.453	ENSGALG00000008857	PRPF4	98	87.619	Gallus_gallus
ENSETEG00000020389	PRPF4	61	73.602	ENSGAFG00000012164	prpf4	66	73.602	Gambusia_affinis
ENSETEG00000020389	PRPF4	96	70.238	ENSGACG00000015476	prpf4	99	69.444	Gasterosteus_aculeatus
ENSETEG00000020389	PRPF4	99	90.116	ENSGAGG00000025029	PRPF4	95	90.116	Gopherus_agassizii
ENSETEG00000020389	PRPF4	100	97.132	ENSGGOG00000006943	PRPF4	100	97.132	Gorilla_gorilla
ENSETEG00000020389	PRPF4	96	77.381	ENSHBUG00000000562	prpf4	99	77.381	Haplochromis_burtoni
ENSETEG00000020389	PRPF4	100	79.810	ENSHGLG00000016628	-	100	80.571	Heterocephalus_glaber_female
ENSETEG00000020389	PRPF4	100	97.132	ENSHGLG00000015191	PRPF4	100	97.132	Heterocephalus_glaber_female
ENSETEG00000020389	PRPF4	100	78.776	ENSHGLG00000003838	-	100	78.776	Heterocephalus_glaber_female
ENSETEG00000020389	PRPF4	100	78.776	ENSHGLG00100005571	-	100	78.776	Heterocephalus_glaber_male
ENSETEG00000020389	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSETEG00000020389	PRPF4	100	96.558	ENSSTOG00000027833	PRPF4	100	96.558	Ictidomys_tridecemlineatus
ENSETEG00000020389	PRPF4	100	97.323	ENSJJAG00000008838	Prpf4	100	97.323	Jaculus_jaculus
ENSETEG00000020389	PRPF4	96	76.786	ENSKMAG00000013236	prpf4	99	76.786	Kryptolebias_marmoratus
ENSETEG00000020389	PRPF4	96	76.494	ENSLBEG00000020611	prpf4	99	76.494	Labrus_bergylta
ENSETEG00000020389	PRPF4	98	80.350	ENSLACG00000016317	PRPF4	98	80.350	Latimeria_chalumnae
ENSETEG00000020389	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSETEG00000020389	PRPF4	100	97.323	ENSLAFG00000018225	PRPF4	100	97.323	Loxodonta_africana
ENSETEG00000020389	PRPF4	100	97.132	ENSMFAG00000039397	PRPF4	100	97.132	Macaca_fascicularis
ENSETEG00000020389	PRPF4	100	97.323	ENSMMUG00000005844	PRPF4	100	97.323	Macaca_mulatta
ENSETEG00000020389	PRPF4	100	86.424	ENSMNEG00000033737	PRPF4	100	86.998	Macaca_nemestrina
ENSETEG00000020389	PRPF4	100	97.323	ENSMLEG00000040284	PRPF4	100	97.323	Mandrillus_leucophaeus
ENSETEG00000020389	PRPF4	97	76.726	ENSMAMG00000020141	prpf4	99	76.726	Mastacembelus_armatus
ENSETEG00000020389	PRPF4	96	77.579	ENSMZEG00005023205	prpf4	99	77.579	Maylandia_zebra
ENSETEG00000020389	PRPF4	99	88.201	ENSMGAG00000001796	PRPF4	96	88.201	Meleagris_gallopavo
ENSETEG00000020389	PRPF4	100	96.558	ENSMAUG00000018022	Prpf4	100	96.558	Mesocricetus_auratus
ENSETEG00000020389	PRPF4	100	96.558	ENSMICG00000015022	PRPF4	100	96.558	Microcebus_murinus
ENSETEG00000020389	PRPF4	100	96.941	ENSMOCG00000018273	Prpf4	100	96.941	Microtus_ochrogaster
ENSETEG00000020389	PRPF4	97	75.248	ENSMMOG00000021177	prpf4	99	75.248	Mola_mola
ENSETEG00000020389	PRPF4	100	92.925	ENSMODG00000025096	-	97	92.925	Monodelphis_domestica
ENSETEG00000020389	PRPF4	100	93.499	ENSMODG00000004444	-	100	93.499	Monodelphis_domestica
ENSETEG00000020389	PRPF4	96	77.183	ENSMALG00000013624	prpf4	99	77.183	Monopterus_albus
ENSETEG00000020389	PRPF4	100	96.941	MGP_CAROLIEiJ_G0026078	Prpf4	100	96.941	Mus_caroli
ENSETEG00000020389	PRPF4	100	96.941	ENSMUSG00000066148	Prpf4	100	96.941	Mus_musculus
ENSETEG00000020389	PRPF4	100	96.750	MGP_PahariEiJ_G0028413	Prpf4	100	96.750	Mus_pahari
ENSETEG00000020389	PRPF4	100	96.941	MGP_SPRETEiJ_G0027042	Prpf4	100	96.941	Mus_spretus
ENSETEG00000020389	PRPF4	100	97.323	ENSMPUG00000007883	PRPF4	100	97.323	Mustela_putorius_furo
ENSETEG00000020389	PRPF4	100	95.220	ENSMLUG00000008626	-	97	95.220	Myotis_lucifugus
ENSETEG00000020389	PRPF4	100	96.941	ENSMLUG00000015309	-	97	96.941	Myotis_lucifugus
ENSETEG00000020389	PRPF4	100	91.969	ENSNGAG00000000468	Prpf4	100	91.969	Nannospalax_galili
ENSETEG00000020389	PRPF4	96	77.778	ENSNBRG00000007972	prpf4	99	77.778	Neolamprologus_brichardi
ENSETEG00000020389	PRPF4	100	97.514	ENSNLEG00000016647	PRPF4	100	97.514	Nomascus_leucogenys
ENSETEG00000020389	PRPF4	98	94.163	ENSMEUG00000013256	PRPF4	100	94.163	Notamacropus_eugenii
ENSETEG00000020389	PRPF4	100	96.941	ENSOPRG00000005302	PRPF4	100	96.941	Ochotona_princeps
ENSETEG00000020389	PRPF4	100	97.323	ENSODEG00000018147	PRPF4	100	97.323	Octodon_degus
ENSETEG00000020389	PRPF4	96	77.579	ENSONIG00000012671	prpf4	99	77.579	Oreochromis_niloticus
ENSETEG00000020389	PRPF4	100	97.323	ENSOCUG00000005046	PRPF4	100	97.323	Oryctolagus_cuniculus
ENSETEG00000020389	PRPF4	96	75.299	ENSORLG00000019641	prpf4	99	75.299	Oryzias_latipes
ENSETEG00000020389	PRPF4	96	75.299	ENSORLG00020019438	prpf4	99	75.299	Oryzias_latipes_hni
ENSETEG00000020389	PRPF4	96	75.158	ENSOMEG00000020941	prpf4	99	75.158	Oryzias_melastigma
ENSETEG00000020389	PRPF4	100	91.969	ENSOGAG00000007802	PRPF4	98	91.969	Otolemur_garnettii
ENSETEG00000020389	PRPF4	100	97.514	ENSOARG00000006319	PRPF4	97	97.514	Ovis_aries
ENSETEG00000020389	PRPF4	100	97.132	ENSPPAG00000041797	PRPF4	100	97.132	Pan_paniscus
ENSETEG00000020389	PRPF4	100	97.514	ENSPPRG00000014360	PRPF4	100	97.514	Panthera_pardus
ENSETEG00000020389	PRPF4	100	97.514	ENSPTIG00000009574	PRPF4	100	97.514	Panthera_tigris_altaica
ENSETEG00000020389	PRPF4	100	97.323	ENSPTRG00000021274	PRPF4	100	97.323	Pan_troglodytes
ENSETEG00000020389	PRPF4	100	97.323	ENSPANG00000025776	PRPF4	96	97.323	Papio_anubis
ENSETEG00000020389	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSETEG00000020389	PRPF4	98	89.903	ENSPSIG00000010713	PRPF4	90	89.903	Pelodiscus_sinensis
ENSETEG00000020389	PRPF4	99	58.514	ENSPMGG00000000997	prpf4	99	58.621	Periophthalmus_magnuspinnatus
ENSETEG00000020389	PRPF4	100	97.323	ENSPEMG00000024115	Prpf4	100	97.323	Peromyscus_maniculatus_bairdii
ENSETEG00000020389	PRPF4	98	94.163	ENSPCIG00000003821	PRPF4	99	94.163	Phascolarctos_cinereus
ENSETEG00000020389	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSETEG00000020389	PRPF4	64	70.536	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSETEG00000020389	PRPF4	91	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSETEG00000020389	PRPF4	98	97.665	ENSPCAG00000002561	PRPF4	100	97.665	Procavia_capensis
ENSETEG00000020389	PRPF4	100	96.750	ENSPCOG00000011975	PRPF4	100	96.750	Propithecus_coquereli
ENSETEG00000020389	PRPF4	100	93.690	ENSPVAG00000004708	PRPF4	100	93.690	Pteropus_vampyrus
ENSETEG00000020389	PRPF4	96	77.579	ENSPNYG00000008013	prpf4	99	77.579	Pundamilia_nyererei
ENSETEG00000020389	PRPF4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSETEG00000020389	PRPF4	100	96.941	ENSRNOG00000014777	Prpf4	100	96.941	Rattus_norvegicus
ENSETEG00000020389	PRPF4	100	97.514	ENSRBIG00000040221	PRPF4	100	97.514	Rhinopithecus_bieti
ENSETEG00000020389	PRPF4	100	97.514	ENSRROG00000040240	PRPF4	100	97.514	Rhinopithecus_roxellana
ENSETEG00000020389	PRPF4	100	93.499	ENSSHAG00000017658	PRPF4	100	93.499	Sarcophilus_harrisii
ENSETEG00000020389	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSETEG00000020389	PRPF4	96	76.190	ENSSMAG00000008889	prpf4	99	76.190	Scophthalmus_maximus
ENSETEG00000020389	PRPF4	96	74.104	ENSSDUG00000022083	prpf4	98	74.303	Seriola_dumerili
ENSETEG00000020389	PRPF4	96	74.303	ENSSLDG00000008115	prpf4	98	74.502	Seriola_lalandi_dorsalis
ENSETEG00000020389	PRPF4	100	89.101	ENSSPUG00000015582	PRPF4	100	89.101	Sphenodon_punctatus
ENSETEG00000020389	PRPF4	96	71.795	ENSSPAG00000011286	prpf4	99	71.795	Stegastes_partitus
ENSETEG00000020389	PRPF4	100	97.514	ENSSSCG00000024648	PRPF4	100	97.514	Sus_scrofa
ENSETEG00000020389	PRPF4	94	89.655	ENSTGUG00000002623	PRPF4	100	89.980	Taeniopygia_guttata
ENSETEG00000020389	PRPF4	97	75.889	ENSTRUG00000008853	prpf4	99	75.889	Takifugu_rubripes
ENSETEG00000020389	PRPF4	97	75.446	ENSTNIG00000013250	prpf4	99	75.446	Tetraodon_nigroviridis
ENSETEG00000020389	PRPF4	100	89.293	ENSTBEG00000000821	PRPF4	100	89.293	Tupaia_belangeri
ENSETEG00000020389	PRPF4	86	98.658	ENSTTRG00000003246	PRPF4	85	98.658	Tursiops_truncatus
ENSETEG00000020389	PRPF4	64	94.643	ENSUAMG00000018288	PRPF4	90	94.643	Ursus_americanus
ENSETEG00000020389	PRPF4	100	96.750	ENSUMAG00000019375	PRPF4	100	96.750	Ursus_maritimus
ENSETEG00000020389	PRPF4	100	97.132	ENSVPAG00000005281	PRPF4	100	97.132	Vicugna_pacos
ENSETEG00000020389	PRPF4	100	96.205	ENSVVUG00000002476	PRPF4	100	96.647	Vulpes_vulpes
ENSETEG00000020389	PRPF4	69	58.564	ENSXCOG00000006101	prpf4	93	59.606	Xiphophorus_couchianus
ENSETEG00000020389	PRPF4	87	64.783	ENSXMAG00000002750	prpf4	98	65.606	Xiphophorus_maculatus