EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000000040 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 28357 bases
Position: chrJH603418.1:25012-53368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000000042	R3H	PF01424.22	6.9e-09	1	1
ENSFALP00000000042	DEAD	PF00270.29	1.2e-10	1	1
ENSFALP00000000042	YTH	PF04146.15	6.9e-42	1	1
ENSFALP00000000042	HA2	PF04408.23	7.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000000042	-	5631	-	ENSFALP00000000042	1365 (aa)	-	U3JB88

Gene Model

Click here to download ENSFALG00000000040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000000040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000000040	-	52	46.063	ENSFALG00000002367	DHX57	53	50.000
ENSFALG00000000040	-	54	42.667	ENSFALG00000010826	DHX29	57	44.928
ENSFALG00000000040	-	50	42.152	ENSFALG00000002009	DHX30	58	42.152
ENSFALG00000000040	-	95	85.386	ENSFALG00000002623	-	99	85.233
ENSFALG00000000040	-	55	44.118	ENSFALG00000002992	DHX9	61	44.118
ENSFALG00000000040	-	56	46.445	ENSFALG00000005045	DHX36	80	46.445

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000000040	-	99	82.590	ENSG00000047188	YTHDC2	98	82.836	Homo_sapiens
ENSFALG00000000040	-	74	59.921	ENSAPOG00000013442	YTHDC2	96	59.390	Acanthochromis_polyacanthus
ENSFALG00000000040	-	99	82.905	ENSAMEG00000006598	YTHDC2	95	83.125	Ailuropoda_melanoleuca
ENSFALG00000000040	-	99	61.176	ENSACIG00000012809	YTHDC2	97	61.176	Amphilophus_citrinellus
ENSFALG00000000040	-	94	62.925	ENSAOCG00000018480	YTHDC2	99	62.925	Amphiprion_ocellaris
ENSFALG00000000040	-	99	60.751	ENSAPEG00000014873	YTHDC2	94	68.421	Amphiprion_percula
ENSFALG00000000040	-	99	60.972	ENSATEG00000010847	YTHDC2	96	60.602	Anabas_testudineus
ENSFALG00000000040	-	99	81.063	ENSACAG00000007754	YTHDC2	95	81.063	Anolis_carolinensis
ENSFALG00000000040	-	99	81.291	ENSANAG00000022177	YTHDC2	95	81.145	Aotus_nancymaae
ENSFALG00000000040	-	99	60.487	ENSACLG00000019069	YTHDC2	95	60.414	Astatotilapia_calliptera
ENSFALG00000000040	-	99	68.778	ENSAMXG00000008735	YTHDC2	96	68.778	Astyanax_mexicanus
ENSFALG00000000040	-	99	82.955	ENSBTAG00000014099	YTHDC2	100	82.809	Bos_taurus
ENSFALG00000000040	-	98	82.423	ENSCJAG00000016598	YTHDC2	96	82.648	Callithrix_jacchus
ENSFALG00000000040	-	99	78.372	ENSCAFG00000000224	YTHDC2	94	85.561	Canis_familiaris
ENSFALG00000000040	-	99	83.419	ENSCAFG00020003668	YTHDC2	96	83.639	Canis_lupus_dingo
ENSFALG00000000040	-	99	83.102	ENSCHIG00000026651	YTHDC2	96	82.955	Capra_hircus
ENSFALG00000000040	-	99	82.943	ENSTSYG00000009634	YTHDC2	98	83.163	Carlito_syrichta
ENSFALG00000000040	-	87	63.240	ENSCAPG00000015691	YTHDC2	96	62.420	Cavia_aperea
ENSFALG00000000040	-	99	82.809	ENSCPOG00000000272	YTHDC2	95	83.029	Cavia_porcellus
ENSFALG00000000040	-	99	83.248	ENSCCAG00000037613	YTHDC2	96	83.467	Cebus_capucinus
ENSFALG00000000040	-	99	82.809	ENSCATG00000031670	YTHDC2	96	83.029	Cercocebus_atys
ENSFALG00000000040	-	99	81.951	ENSCLAG00000014076	YTHDC2	95	82.169	Chinchilla_lanigera
ENSFALG00000000040	-	99	82.736	ENSCSAG00000014899	YTHDC2	96	82.955	Chlorocebus_sabaeus
ENSFALG00000000040	-	91	73.081	ENSCHOG00000013323	YTHDC2	91	76.064	Choloepus_hoffmanni
ENSFALG00000000040	-	99	83.760	ENSCPBG00000013876	YTHDC2	96	84.345	Chrysemys_picta_bellii
ENSFALG00000000040	-	99	82.809	ENSCANG00000025759	YTHDC2	95	83.029	Colobus_angolensis_palliatus
ENSFALG00000000040	-	99	83.125	ENSCGRG00001021338	Ythdc2	95	83.346	Cricetulus_griseus_chok1gshd
ENSFALG00000000040	-	99	82.318	ENSCGRG00000010336	Ythdc2	95	82.539	Cricetulus_griseus_crigri
ENSFALG00000000040	-	88	48.929	ENSCSEG00000017911	YTHDC2	95	50.394	Cynoglossus_semilaevis
ENSFALG00000000040	-	99	58.395	ENSCVAG00000021377	YTHDC2	96	57.953	Cyprinodon_variegatus
ENSFALG00000000040	-	99	58.929	ENSDARG00000103525	YTHDC2	96	58.925	Danio_rerio
ENSFALG00000000040	-	99	80.424	ENSDNOG00000012198	YTHDC2	96	80.643	Dasypus_novemcinctus
ENSFALG00000000040	-	99	79.956	ENSDORG00000007057	Ythdc2	96	79.883	Dipodomys_ordii
ENSFALG00000000040	-	65	33.211	FBgn0030833	CG8915	85	33.211	Drosophila_melanogaster
ENSFALG00000000040	-	83	83.226	ENSETEG00000013681	YTHDC2	79	83.226	Echinops_telfairi
ENSFALG00000000040	-	92	53.394	ENSEBUG00000014315	-	87	53.303	Eptatretus_burgeri
ENSFALG00000000040	-	99	83.455	ENSEASG00005015135	YTHDC2	95	83.163	Equus_asinus_asinus
ENSFALG00000000040	-	99	83.309	ENSECAG00000020630	YTHDC2	95	83.016	Equus_caballus
ENSFALG00000000040	-	86	82.493	ENSEEUG00000008580	YTHDC2	82	82.535	Erinaceus_europaeus
ENSFALG00000000040	-	99	68.120	ENSELUG00000015902	YTHDC2	96	67.405	Esox_lucius
ENSFALG00000000040	-	99	83.016	ENSFCAG00000031967	YTHDC2	96	83.102	Felis_catus
ENSFALG00000000040	-	99	82.516	ENSFDAG00000008701	YTHDC2	98	82.736	Fukomys_damarensis
ENSFALG00000000040	-	99	59.515	ENSFHEG00000009312	YTHDC2	96	59.515	Fundulus_heteroclitus
ENSFALG00000000040	-	99	81.577	ENSGALG00000000189	YTHDC2	99	81.342	Gallus_gallus
ENSFALG00000000040	-	86	63.291	ENSGAFG00000008158	YTHDC2	90	63.291	Gambusia_affinis
ENSFALG00000000040	-	58	68.553	ENSGACG00000018569	YTHDC2	99	68.553	Gasterosteus_aculeatus
ENSFALG00000000040	-	99	83.760	ENSGAGG00000010063	YTHDC2	100	84.345	Gopherus_agassizii
ENSFALG00000000040	-	99	83.029	ENSGGOG00000014407	YTHDC2	96	83.175	Gorilla_gorilla
ENSFALG00000000040	-	86	61.486	ENSHBUG00000007492	YTHDC2	93	61.230	Haplochromis_burtoni
ENSFALG00000000040	-	99	82.663	ENSHGLG00000019014	YTHDC2	95	82.590	Heterocephalus_glaber_female
ENSFALG00000000040	-	99	82.663	ENSHGLG00100008192	YTHDC2	95	82.590	Heterocephalus_glaber_male
ENSFALG00000000040	-	92	57.710	ENSHCOG00000014281	YTHDC2	92	64.286	Hippocampus_comes
ENSFALG00000000040	-	99	66.447	ENSIPUG00000019561	ythdc2	94	66.447	Ictalurus_punctatus
ENSFALG00000000040	-	98	82.761	ENSSTOG00000013239	YTHDC2	94	82.985	Ictidomys_tridecemlineatus
ENSFALG00000000040	-	99	79.650	ENSJJAG00000017908	Ythdc2	95	79.840	Jaculus_jaculus
ENSFALG00000000040	-	99	59.444	ENSKMAG00000015969	YTHDC2	96	60.000	Kryptolebias_marmoratus
ENSFALG00000000040	-	99	61.209	ENSLBEG00000027926	YTHDC2	96	59.970	Labrus_bergylta
ENSFALG00000000040	-	99	77.639	ENSLACG00000010991	YTHDC2	95	77.493	Latimeria_chalumnae
ENSFALG00000000040	-	99	70.498	ENSLOCG00000009001	YTHDC2	95	70.351	Lepisosteus_oculatus
ENSFALG00000000040	-	93	83.124	ENSLAFG00000003538	YTHDC2	100	83.359	Loxodonta_africana
ENSFALG00000000040	-	99	82.809	ENSMNEG00000040900	YTHDC2	96	83.029	Macaca_nemestrina
ENSFALG00000000040	-	99	82.955	ENSMLEG00000043185	YTHDC2	96	83.175	Mandrillus_leucophaeus
ENSFALG00000000040	-	99	62.142	ENSMAMG00000019193	YTHDC2	96	61.943	Mastacembelus_armatus
ENSFALG00000000040	-	99	60.662	ENSMZEG00005009153	YTHDC2	96	60.588	Maylandia_zebra
ENSFALG00000000040	-	99	70.640	ENSMGAG00000006674	YTHDC2	94	76.681	Meleagris_gallopavo
ENSFALG00000000040	-	99	82.979	ENSMAUG00000016179	Ythdc2	94	83.199	Mesocricetus_auratus
ENSFALG00000000040	-	99	83.102	ENSMICG00000004030	YTHDC2	95	83.321	Microcebus_murinus
ENSFALG00000000040	-	99	82.870	ENSMOCG00000011740	Ythdc2	95	83.089	Microtus_ochrogaster
ENSFALG00000000040	-	85	59.012	ENSMMOG00000011758	YTHDC2	91	58.701	Mola_mola
ENSFALG00000000040	-	99	83.467	ENSMODG00000015671	YTHDC2	94	84.053	Monodelphis_domestica
ENSFALG00000000040	-	88	60.528	ENSMALG00000002782	YTHDC2	91	62.953	Monopterus_albus
ENSFALG00000000040	-	99	82.870	MGP_CAROLIEiJ_G0022248	Ythdc2	99	84.364	Mus_caroli
ENSFALG00000000040	-	99	82.663	ENSMUSG00000034653	Ythdc2	99	84.364	Mus_musculus
ENSFALG00000000040	-	99	82.736	MGP_PahariEiJ_G0018981	Ythdc2	99	84.536	Mus_pahari
ENSFALG00000000040	-	99	82.663	MGP_SPRETEiJ_G0023159	Ythdc2	99	84.364	Mus_spretus
ENSFALG00000000040	-	99	83.419	ENSMPUG00000000755	YTHDC2	98	83.639	Mustela_putorius_furo
ENSFALG00000000040	-	99	82.991	ENSMLUG00000006106	YTHDC2	95	82.711	Myotis_lucifugus
ENSFALG00000000040	-	99	82.711	ENSNGAG00000017798	Ythdc2	96	83.370	Nannospalax_galili
ENSFALG00000000040	-	98	58.153	ENSNBRG00000000762	YTHDC2	93	57.524	Neolamprologus_brichardi
ENSFALG00000000040	-	99	82.516	ENSNLEG00000011648	YTHDC2	96	82.736	Nomascus_leucogenys
ENSFALG00000000040	-	82	81.143	ENSMEUG00000004414	YTHDC2	78	81.714	Notamacropus_eugenii
ENSFALG00000000040	-	73	94.118	ENSOPRG00000000462	YTHDC2	71	94.118	Ochotona_princeps
ENSFALG00000000040	-	99	82.590	ENSODEG00000007804	YTHDC2	95	82.809	Octodon_degus
ENSFALG00000000040	-	99	61.522	ENSONIG00000011601	YTHDC2	97	61.302	Oreochromis_niloticus
ENSFALG00000000040	-	99	83.016	ENSOCUG00000012096	YTHDC2	99	83.236	Oryctolagus_cuniculus
ENSFALG00000000040	-	83	68.966	ENSORLG00000019098	YTHDC2	86	69.925	Oryzias_latipes
ENSFALG00000000040	-	99	54.206	ENSORLG00015000390	YTHDC2	96	54.292	Oryzias_latipes_hsok
ENSFALG00000000040	-	99	55.490	ENSOMEG00000014221	YTHDC2	96	55.343	Oryzias_melastigma
ENSFALG00000000040	-	99	83.248	ENSOGAG00000001618	YTHDC2	95	83.467	Otolemur_garnettii
ENSFALG00000000040	-	99	82.980	ENSOARG00000016223	YTHDC2	95	82.834	Ovis_aries
ENSFALG00000000040	-	99	82.809	ENSPPAG00000018854	YTHDC2	96	82.955	Pan_paniscus
ENSFALG00000000040	-	99	83.016	ENSPPRG00000001595	YTHDC2	96	83.102	Panthera_pardus
ENSFALG00000000040	-	99	83.089	ENSPTIG00000021801	YTHDC2	96	83.175	Panthera_tigris_altaica
ENSFALG00000000040	-	99	82.809	ENSPTRG00000017143	YTHDC2	96	82.955	Pan_troglodytes
ENSFALG00000000040	-	99	79.283	ENSPANG00000024470	YTHDC2	95	79.502	Papio_anubis
ENSFALG00000000040	-	99	67.158	ENSPKIG00000016010	YTHDC2	96	67.378	Paramormyrops_kingsleyae
ENSFALG00000000040	-	99	84.053	ENSPSIG00000014798	YTHDC2	100	84.272	Pelodiscus_sinensis
ENSFALG00000000040	-	50	58.211	ENSPMGG00000020677	YTHDC2	92	58.358	Periophthalmus_magnuspinnatus
ENSFALG00000000040	-	99	82.979	ENSPEMG00000018062	Ythdc2	95	83.163	Peromyscus_maniculatus_bairdii
ENSFALG00000000040	-	99	60.838	ENSPMAG00000003218	-	96	60.617	Petromyzon_marinus
ENSFALG00000000040	-	99	83.687	ENSPCIG00000004342	YTHDC2	96	83.541	Phascolarctos_cinereus
ENSFALG00000000040	-	99	60.145	ENSPFOG00000003895	YTHDC2	99	61.538	Poecilia_formosa
ENSFALG00000000040	-	99	60.266	ENSPLAG00000007558	YTHDC2	96	60.266	Poecilia_latipinna
ENSFALG00000000040	-	99	60.517	ENSPMEG00000015205	YTHDC2	99	60.517	Poecilia_mexicana
ENSFALG00000000040	-	99	59.795	ENSPREG00000012096	YTHDC2	95	59.795	Poecilia_reticulata
ENSFALG00000000040	-	99	82.078	ENSPPYG00000015691	YTHDC2	96	82.297	Pongo_abelii
ENSFALG00000000040	-	87	76.676	ENSPCAG00000007733	YTHDC2	84	76.012	Procavia_capensis
ENSFALG00000000040	-	99	74.471	ENSPCOG00000017526	YTHDC2	95	75.201	Propithecus_coquereli
ENSFALG00000000040	-	93	84.929	ENSPVAG00000012364	YTHDC2	89	84.929	Pteropus_vampyrus
ENSFALG00000000040	-	98	60.284	ENSPNYG00000006908	YTHDC2	93	60.060	Pundamilia_nyererei
ENSFALG00000000040	-	99	69.543	ENSPNAG00000010128	YTHDC2	96	69.543	Pygocentrus_nattereri
ENSFALG00000000040	-	87	81.971	ENSRNOG00000039241	Ythdc2	94	81.235	Rattus_norvegicus
ENSFALG00000000040	-	99	79.840	ENSRBIG00000040291	YTHDC2	96	80.058	Rhinopithecus_bieti
ENSFALG00000000040	-	99	82.663	ENSRROG00000039477	YTHDC2	96	82.882	Rhinopithecus_roxellana
ENSFALG00000000040	-	99	83.248	ENSSBOG00000023829	YTHDC2	96	83.467	Saimiri_boliviensis_boliviensis
ENSFALG00000000040	-	99	83.467	ENSSHAG00000003101	YTHDC2	96	84.053	Sarcophilus_harrisii
ENSFALG00000000040	-	99	64.585	ENSSFOG00015003572	ythdc2	96	64.585	Scleropages_formosus
ENSFALG00000000040	-	85	53.621	ENSSMAG00000011225	YTHDC2	94	53.534	Scophthalmus_maximus
ENSFALG00000000040	-	99	61.754	ENSSDUG00000021389	YTHDC2	96	61.682	Seriola_dumerili
ENSFALG00000000040	-	99	63.542	ENSSLDG00000022840	YTHDC2	96	63.469	Seriola_lalandi_dorsalis
ENSFALG00000000040	-	87	85.430	ENSSARG00000000924	YTHDC2	89	85.430	Sorex_araneus
ENSFALG00000000040	-	50	81.953	ENSSPUG00000015912	-	91	81.953	Sphenodon_punctatus
ENSFALG00000000040	-	99	60.575	ENSSPAG00000014889	YTHDC2	96	60.501	Stegastes_partitus
ENSFALG00000000040	-	99	83.248	ENSSSCG00000014211	YTHDC2	100	83.384	Sus_scrofa
ENSFALG00000000040	-	73	91.767	ENSTGUG00000014992	-	99	91.082	Taeniopygia_guttata
ENSFALG00000000040	-	97	84.853	ENSTGUG00000003755	-	100	84.552	Taeniopygia_guttata
ENSFALG00000000040	-	99	56.830	ENSTRUG00000006717	YTHDC2	94	63.636	Takifugu_rubripes
ENSFALG00000000040	-	97	56.554	ENSTNIG00000003707	YTHDC2	99	56.180	Tetraodon_nigroviridis
ENSFALG00000000040	-	88	79.248	ENSTBEG00000006872	YTHDC2	88	78.988	Tupaia_belangeri
ENSFALG00000000040	-	85	82.581	ENSTTRG00000003116	YTHDC2	80	82.581	Tursiops_truncatus
ENSFALG00000000040	-	75	85.476	ENSUAMG00000003688	YTHDC2	94	85.476	Ursus_americanus
ENSFALG00000000040	-	99	83.125	ENSUMAG00000023877	YTHDC2	99	83.346	Ursus_maritimus
ENSFALG00000000040	-	98	76.589	ENSVPAG00000007516	YTHDC2	94	76.365	Vicugna_pacos
ENSFALG00000000040	-	99	83.492	ENSVVUG00000000281	YTHDC2	95	83.712	Vulpes_vulpes
ENSFALG00000000040	-	99	71.834	ENSXETG00000021517	ythdc2	96	71.574	Xenopus_tropicalis
ENSFALG00000000040	-	99	58.893	ENSXCOG00000016406	YTHDC2	90	66.917	Xiphophorus_couchianus
ENSFALG00000000040	-	99	60.206	ENSXMAG00000007618	YTHDC2	96	60.206	Xiphophorus_maculatus