EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000000476 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 8394 bases
Position: chrJH603214.1:732404-740797
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000000491	PWI	PF01480.17	1.1e-30	1	1
ENSFALP00000000488	PWI	PF01480.17	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000000492	SRRM1-201	1458	-	ENSFALP00000000488	71 (aa)	-	U3JCI4
ENSFALT00000000495	SRRM1-202	1401	-	ENSFALP00000000491	399 (aa)	-	U3JCI7

Gene Model

Click here to download ENSFALG00000000476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000000476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000000476	SRRM1	100	100.000	ENSG00000133226	SRRM1	100	99.010	Homo_sapiens
ENSFALG00000000476	SRRM1	100	94.366	ENSACIG00000023398	-	94	61.089	Amphilophus_citrinellus
ENSFALG00000000476	SRRM1	100	94.366	ENSACLG00000019786	-	92	65.984	Astatotilapia_calliptera
ENSFALG00000000476	SRRM1	100	94.366	ENSAMXG00000040320	-	97	71.308	Astyanax_mexicanus
ENSFALG00000000476	SRRM1	100	100.000	ENSCCAG00000029474	SRRM1	50	91.571	Cebus_capucinus
ENSFALG00000000476	SRRM1	97	69.565	ENSCING00000022242	-	91	63.889	Ciona_intestinalis
ENSFALG00000000476	SRRM1	97	75.362	ENSCSAVG00000003919	-	64	69.697	Ciona_savignyi
ENSFALG00000000476	SRRM1	100	92.958	ENSCVAG00000000504	-	61	92.958	Cyprinodon_variegatus
ENSFALG00000000476	SRRM1	100	100.000	ENSDORG00000028601	-	97	74.775	Dipodomys_ordii
ENSFALG00000000476	SRRM1	59	71.429	ENSEBUG00000002653	-	81	73.554	Eptatretus_burgeri
ENSFALG00000000476	SRRM1	97	88.406	ENSFCAG00000044640	-	65	90.000	Felis_catus
ENSFALG00000000476	SRRM1	100	97.183	ENSFCAG00000034671	-	83	80.913	Felis_catus
ENSFALG00000000476	SRRM1	100	92.958	ENSFHEG00000007359	-	82	83.750	Fundulus_heteroclitus
ENSFALG00000000476	SRRM1	100	100.000	ENSGALG00000001283	SRRM1	90	100.000	Gallus_gallus
ENSFALG00000000476	SRRM1	100	94.366	ENSGAFG00000019431	-	87	63.485	Gambusia_affinis
ENSFALG00000000476	SRRM1	100	94.366	ENSHBUG00000020354	-	90	94.366	Haplochromis_burtoni
ENSFALG00000000476	SRRM1	87	91.935	ENSHGLG00100017918	-	85	97.143	Heterocephalus_glaber_male
ENSFALG00000000476	SRRM1	100	81.690	ENSHGLG00100010430	-	90	80.822	Heterocephalus_glaber_male
ENSFALG00000000476	SRRM1	100	94.366	ENSKMAG00000013810	-	79	94.366	Kryptolebias_marmoratus
ENSFALG00000000476	SRRM1	100	94.366	ENSMZEG00005006344	-	92	66.393	Maylandia_zebra
ENSFALG00000000476	SRRM1	100	94.366	ENSMMOG00000002390	-	70	94.366	Mola_mola
ENSFALG00000000476	SRRM1	76	90.741	ENSMALG00000010813	-	53	83.846	Monopterus_albus
ENSFALG00000000476	SRRM1	100	100.000	MGP_CAROLIEiJ_G0026636	Srrm1	97	78.378	Mus_caroli
ENSFALG00000000476	SRRM1	100	100.000	ENSMUSG00000028809	Srrm1	97	78.378	Mus_musculus
ENSFALG00000000476	SRRM1	100	100.000	MGP_PahariEiJ_G0028969	Srrm1	97	78.378	Mus_pahari
ENSFALG00000000476	SRRM1	100	100.000	MGP_SPRETEiJ_G0027616	Srrm1	97	78.378	Mus_spretus
ENSFALG00000000476	SRRM1	100	100.000	ENSMPUG00000015831	-	96	79.060	Mustela_putorius_furo
ENSFALG00000000476	SRRM1	100	94.366	ENSNBRG00000010911	-	89	63.052	Neolamprologus_brichardi
ENSFALG00000000476	SRRM1	100	90.141	ENSODEG00000002361	-	93	87.671	Octodon_degus
ENSFALG00000000476	SRRM1	100	97.183	ENSODEG00000007221	-	94	95.833	Octodon_degus
ENSFALG00000000476	SRRM1	100	95.775	ENSODEG00000019473	-	94	93.151	Octodon_degus
ENSFALG00000000476	SRRM1	100	94.366	ENSORLG00000017510	-	95	66.805	Oryzias_latipes
ENSFALG00000000476	SRRM1	100	94.366	ENSORLG00020018419	-	90	94.366	Oryzias_latipes_hni
ENSFALG00000000476	SRRM1	100	88.732	ENSPTIG00000022093	-	72	89.041	Panthera_tigris_altaica
ENSFALG00000000476	SRRM1	100	91.549	ENSPMGG00000009036	-	93	65.254	Periophthalmus_magnuspinnatus
ENSFALG00000000476	SRRM1	100	94.366	ENSPMEG00000002615	-	90	94.366	Poecilia_mexicana
ENSFALG00000000476	SRRM1	100	94.366	ENSPMEG00000011776	-	90	94.366	Poecilia_mexicana
ENSFALG00000000476	SRRM1	100	94.366	ENSPNYG00000005058	-	92	66.393	Pundamilia_nyererei
ENSFALG00000000476	SRRM1	100	92.958	ENSPNAG00000005888	-	68	92.958	Pygocentrus_nattereri
ENSFALG00000000476	SRRM1	66	87.234	ENSRROG00000041543	-	51	66.803	Rhinopithecus_roxellana
ENSFALG00000000476	SRRM1	100	100.000	ENSSBOG00000019884	SRRM1	90	100.000	Saimiri_boliviensis_boliviensis
ENSFALG00000000476	SRRM1	100	92.958	ENSSMAG00000009318	-	56	90.076	Scophthalmus_maximus
ENSFALG00000000476	SRRM1	100	100.000	ENSTGUG00000016669	-	99	100.000	Taeniopygia_guttata
ENSFALG00000000476	SRRM1	100	100.000	ENSUAMG00000011740	-	79	100.000	Ursus_americanus