EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFALG00000000543 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Plus strand
Length
15349 bases
Position
chrJH603214.1:1123894-1139242
Accession
101812198
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000000561PABPPF00658.182.3e-3211
ENSFALP00000000561RRM_5PF13893.62.4e-1012
ENSFALP00000000561RRM_5PF13893.62.4e-1022
ENSFALP00000000561RRM_1PF00076.222.3e-9114
ENSFALP00000000561RRM_1PF00076.222.3e-9124
ENSFALP00000000561RRM_1PF00076.222.3e-9134
ENSFALP00000000561RRM_1PF00076.222.3e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000000565PABPC4-2012567-ENSFALP00000000561629 (aa)XP_005058265U3JCQ7
Gene Model
Click here to download ENSFALG00000000543's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000000543's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFALG00000000543PABPC45731.319ENSFALG00000002173TIA17630.769
ENSFALG00000000543PABPC49778.131ENSFALG00000005841PABPC19877.778
ENSFALG00000000543PABPC48965.986ENSFALG00000005372PABPC1L9069.832
ENSFALG00000000543PABPC45934.940ENSFALG00000005331ELAVL48834.940
ENSFALG00000000543PABPC45239.535ENSFALG00000006402CELF16338.636
ENSFALG00000000543PABPC45838.272ENSFALG00000011725ELAVL17038.272
ENSFALG00000000543PABPC45837.500ENSFALG00000001873CELF25837.500
ENSFALG00000000543PABPC45836.145ENSFALG00000007363ELAVL28336.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000000543PABPC410090.952ENSG00000090621PABPC410097.674Homo_sapiens
ENSFALG00000000543PABPC49985.828ENSAPOG00000001161pabpc49985.804Acanthochromis_polyacanthus
ENSFALG00000000543PABPC49952.979ENSAMEG00000015083-9952.496Ailuropoda_melanoleuca
ENSFALG00000000543PABPC410086.950ENSAMEG00000011535-9986.950Ailuropoda_melanoleuca
ENSFALG00000000543PABPC410085.962ENSACIG00000023343pabpc49986.593Amphilophus_citrinellus
ENSFALG00000000543PABPC49985.987ENSAOCG00000021529pabpc49985.962Amphiprion_ocellaris
ENSFALG00000000543PABPC49985.987ENSAPEG00000019196pabpc49985.962Amphiprion_percula
ENSFALG00000000543PABPC49985.851ENSATEG00000007402pabpc49985.377Anabas_testudineus
ENSFALG00000000543PABPC410096.667ENSAPLG00000009729-10096.667Anas_platyrhynchos
ENSFALG00000000543PABPC49994.812ENSACAG00000002544PABPC410094.812Anolis_carolinensis
ENSFALG00000000543PABPC410090.952ENSANAG00000025079PABPC49990.952Aotus_nancymaae
ENSFALG00000000543PABPC410085.804ENSACLG00000019558pabpc49985.423Astatotilapia_calliptera
ENSFALG00000000543PABPC410081.703ENSAMXG00000018779pabpc49982.334Astyanax_mexicanus
ENSFALG00000000543PABPC45885.629ENSBTAG00000048536-9385.629Bos_taurus
ENSFALG00000000543PABPC410087.112ENSBTAG00000017125PABPC49987.267Bos_taurus
ENSFALG00000000543PABPC410090.952ENSCJAG00000002512-9990.952Callithrix_jacchus
ENSFALG00000000543PABPC47881.481ENSCJAG00000045953-9281.405Callithrix_jacchus
ENSFALG00000000543PABPC410091.111ENSCAFG00000003081PABPC49991.111Canis_familiaris
ENSFALG00000000543PABPC49691.542ENSCAFG00020004161PABPC49987.102Canis_lupus_dingo
ENSFALG00000000543PABPC410087.102ENSCHIG00000019398-9987.102Capra_hircus
ENSFALG00000000543PABPC410070.801ENSCHIG00000023385-9970.801Capra_hircus
ENSFALG00000000543PABPC410090.952ENSTSYG00000006532PABPC49990.952Carlito_syrichta
ENSFALG00000000543PABPC49990.750ENSCAPG00000015984PABPC49990.750Cavia_aperea
ENSFALG00000000543PABPC410090.952ENSCPOG00000009552PABPC49990.952Cavia_porcellus
ENSFALG00000000543PABPC410090.794ENSCCAG00000037306PABPC49990.794Cebus_capucinus
ENSFALG00000000543PABPC410090.952ENSCATG00000042164PABPC49990.952Cercocebus_atys
ENSFALG00000000543PABPC410090.635ENSCLAG00000011899PABPC49990.635Chinchilla_lanigera
ENSFALG00000000543PABPC410086.950ENSCSAG00000001135PABPC49986.950Chlorocebus_sabaeus
ENSFALG00000000543PABPC48690.237ENSCHOG00000005327PABPC48190.237Choloepus_hoffmanni
ENSFALG00000000543PABPC410097.143ENSCPBG00000001038PABPC410097.143Chrysemys_picta_bellii
ENSFALG00000000543PABPC49990.821ENSCANG00000034177PABPC49990.821Colobus_angolensis_palliatus
ENSFALG00000000543PABPC49988.567ENSCGRG00001018166Pabpc410086.909Cricetulus_griseus_chok1gshd
ENSFALG00000000543PABPC49888.562ENSCGRG00000009777Pabpc410086.880Cricetulus_griseus_crigri
ENSFALG00000000543PABPC49984.992ENSCSEG00000000130pabpc49985.624Cynoglossus_semilaevis
ENSFALG00000000543PABPC49985.623ENSCVAG00000019246pabpc49986.262Cyprinodon_variegatus
ENSFALG00000000543PABPC49988.114ENSDARG00000059259pabpc410088.651Danio_rerio
ENSFALG00000000543PABPC49990.519ENSDNOG00000018444-9990.519Dasypus_novemcinctus
ENSFALG00000000543PABPC410087.714ENSDORG00000011581Pabpc49987.714Dipodomys_ordii
ENSFALG00000000543PABPC48759.890ENSETEG00000009172-9959.890Echinops_telfairi
ENSFALG00000000543PABPC410095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSFALG00000000543PABPC49778.191ENSEBUG00000013782pabpc49977.690Eptatretus_burgeri
ENSFALG00000000543PABPC49978.025ENSEBUG00000000992pabpc49976.837Eptatretus_burgeri
ENSFALG00000000543PABPC410087.102ENSEASG00005014119PABPC49987.102Equus_asinus_asinus
ENSFALG00000000543PABPC410087.102ENSECAG00000009396PABPC49987.102Equus_caballus
ENSFALG00000000543PABPC49885.471ENSEEUG00000002962PABPC49985.129Erinaceus_europaeus
ENSFALG00000000543PABPC49986.212ENSELUG00000003195pabpc49986.635Esox_lucius
ENSFALG00000000543PABPC410091.111ENSFCAG00000015254-9991.111Felis_catus
ENSFALG00000000543PABPC49056.930ENSFDAG00000010581-10054.498Fukomys_damarensis
ENSFALG00000000543PABPC410085.455ENSFDAG00000020016-9986.646Fukomys_damarensis
ENSFALG00000000543PABPC410085.512ENSFHEG00000007548pabpc49986.142Fundulus_heteroclitus
ENSFALG00000000543PABPC410084.567ENSGMOG00000019025pabpc49985.197Gadus_morhua
ENSFALG00000000543PABPC410096.667ENSGALG00000003800PABPC410096.667Gallus_gallus
ENSFALG00000000543PABPC49992.453ENSGAFG00000018195pabpc49897.778Gambusia_affinis
ENSFALG00000000543PABPC49984.044ENSGACG00000007179pabpc49984.543Gasterosteus_aculeatus
ENSFALG00000000543PABPC410096.825ENSGAGG00000001888PABPC410096.825Gopherus_agassizii
ENSFALG00000000543PABPC410090.952ENSGGOG00000004002PABPC49990.952Gorilla_gorilla
ENSFALG00000000543PABPC410085.647ENSHBUG00000020206pabpc49985.266Haplochromis_burtoni
ENSFALG00000000543PABPC410090.794ENSHGLG00000011162PABPC49990.794Heterocephalus_glaber_female
ENSFALG00000000543PABPC410090.794ENSHGLG00100001580PABPC49990.794Heterocephalus_glaber_male
ENSFALG00000000543PABPC49985.624ENSHCOG00000012694pabpc49986.256Hippocampus_comes
ENSFALG00000000543PABPC49885.714ENSIPUG00000016620pabpc49985.827Ictalurus_punctatus
ENSFALG00000000543PABPC410089.030ENSSTOG00000010416PABPC49987.758Ictidomys_tridecemlineatus
ENSFALG00000000543PABPC410086.003ENSJJAG00000007781Pabpc49986.003Jaculus_jaculus
ENSFALG00000000543PABPC410085.086ENSKMAG00000013597pabpc49985.714Kryptolebias_marmoratus
ENSFALG00000000543PABPC410084.591ENSLBEG00000013654pabpc49984.748Labrus_bergylta
ENSFALG00000000543PABPC410092.114ENSLACG00000011907PABPC410092.114Latimeria_chalumnae
ENSFALG00000000543PABPC410089.185ENSLOCG00000001877pabpc410089.969Lepisosteus_oculatus
ENSFALG00000000543PABPC410089.189ENSLAFG00000000151PABPC49989.189Loxodonta_africana
ENSFALG00000000543PABPC410090.952ENSMFAG00000041481PABPC49990.952Macaca_fascicularis
ENSFALG00000000543PABPC410086.950ENSMMUG00000007497PABPC49986.950Macaca_mulatta
ENSFALG00000000543PABPC410090.794ENSMNEG00000043054PABPC49990.794Macaca_nemestrina
ENSFALG00000000543PABPC410090.952ENSMLEG00000040716PABPC49990.952Mandrillus_leucophaeus
ENSFALG00000000543PABPC49985.669ENSMAMG00000010025pabpc49985.557Mastacembelus_armatus
ENSFALG00000000543PABPC410085.647ENSMZEG00005006141pabpc49985.266Maylandia_zebra
ENSFALG00000000543PABPC49993.186ENSMGAG00000005408PABPC410093.186Meleagris_gallopavo
ENSFALG00000000543PABPC47984.685ENSMAUG00000019763-8781.452Mesocricetus_auratus
ENSFALG00000000543PABPC47283.173ENSMAUG00000001295-9783.173Mesocricetus_auratus
ENSFALG00000000543PABPC45783.234ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSFALG00000000543PABPC48988.235ENSMICG00000016633-10088.414Microcebus_murinus
ENSFALG00000000543PABPC49977.402ENSMICG00000036729-9977.402Microcebus_murinus
ENSFALG00000000543PABPC49991.040ENSMOCG00000006763Pabpc49990.476Microtus_ochrogaster
ENSFALG00000000543PABPC410083.703ENSMMOG00000002363pabpc49981.395Mola_mola
ENSFALG00000000543PABPC45972.533ENSMODG00000018051-9672.533Monodelphis_domestica
ENSFALG00000000543PABPC410089.177ENSMODG00000017657-10089.177Monodelphis_domestica
ENSFALG00000000543PABPC49985.397ENSMALG00000011017pabpc49984.639Monopterus_albus
ENSFALG00000000543PABPC49976.049MGP_CAROLIEiJ_G0024864-9976.049Mus_caroli
ENSFALG00000000543PABPC410084.848MGP_CAROLIEiJ_G0026435-10097.872Mus_caroli
ENSFALG00000000543PABPC410090.476ENSMUSG00000011257Pabpc410096.429Mus_musculus
ENSFALG00000000543PABPC49985.253MGP_PahariEiJ_G0028765Pabpc410098.582Mus_pahari
ENSFALG00000000543PABPC49970.844MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSFALG00000000543PABPC49550.166ENSMPUG00000006836-10050.166Mustela_putorius_furo
ENSFALG00000000543PABPC410087.102ENSMPUG00000014414-9987.102Mustela_putorius_furo
ENSFALG00000000543PABPC410089.348ENSMLUG00000012068PABPC49989.348Myotis_lucifugus
ENSFALG00000000543PABPC410089.030ENSNGAG00000018292Pabpc49989.030Nannospalax_galili
ENSFALG00000000543PABPC46689.881ENSNBRG00000010047-7289.881Neolamprologus_brichardi
ENSFALG00000000543PABPC46097.596ENSNBRG00000009708pabpc49897.596Neolamprologus_brichardi
ENSFALG00000000543PABPC410090.952ENSNLEG00000011928PABPC49990.952Nomascus_leucogenys
ENSFALG00000000543PABPC48592.063ENSOPRG00000011984PABPC48792.063Ochotona_princeps
ENSFALG00000000543PABPC410090.476ENSODEG00000006592-9990.476Octodon_degus
ENSFALG00000000543PABPC45384.286ENSODEG00000013457-10084.286Octodon_degus
ENSFALG00000000543PABPC49979.704ENSODEG00000017434-9979.915Octodon_degus
ENSFALG00000000543PABPC410085.647ENSONIG00000008176pabpc49985.423Oreochromis_niloticus
ENSFALG00000000543PABPC410095.079ENSOANG00000010001PABPC410095.079Ornithorhynchus_anatinus
ENSFALG00000000543PABPC49686.867ENSOCUG00000000562PABPC48886.867Oryctolagus_cuniculus
ENSFALG00000000543PABPC49992.901ENSORLG00000017479pabpc49992.901Oryzias_latipes
ENSFALG00000000543PABPC49992.901ENSORLG00020018644pabpc49992.901Oryzias_latipes_hni
ENSFALG00000000543PABPC49992.901ENSORLG00015015042pabpc49992.901Oryzias_latipes_hsok
ENSFALG00000000543PABPC49985.805ENSOMEG00000014410pabpc49984.977Oryzias_melastigma
ENSFALG00000000543PABPC410086.687ENSOGAG00000004067PABPC49986.842Otolemur_garnettii
ENSFALG00000000543PABPC410087.102ENSOARG00000020060PABPC49987.102Ovis_aries
ENSFALG00000000543PABPC410090.952ENSPPAG00000043625PABPC49990.952Pan_paniscus
ENSFALG00000000543PABPC410091.111ENSPPRG00000024727PABPC49991.111Panthera_pardus
ENSFALG00000000543PABPC410091.111ENSPTIG00000005829PABPC49991.111Panthera_tigris_altaica
ENSFALG00000000543PABPC410090.952ENSPTRG00000000573PABPC49990.952Pan_troglodytes
ENSFALG00000000543PABPC410091.111ENSPANG00000009484PABPC49991.111Papio_anubis
ENSFALG00000000543PABPC49987.855ENSPKIG00000025356pabpc49988.486Paramormyrops_kingsleyae
ENSFALG00000000543PABPC410097.302ENSPSIG00000016892PABPC410097.302Pelodiscus_sinensis
ENSFALG00000000543PABPC410083.254ENSPMGG00000009073pabpc49982.650Periophthalmus_magnuspinnatus
ENSFALG00000000543PABPC49985.174ENSPEMG00000024193-9985.174Peromyscus_maniculatus_bairdii
ENSFALG00000000543PABPC410089.841ENSPEMG00000023569-9989.841Peromyscus_maniculatus_bairdii
ENSFALG00000000543PABPC49772.746ENSPMAG00000007885pabpc49972.167Petromyzon_marinus
ENSFALG00000000543PABPC48975.043ENSPMAG00000002836pabpc410075.217Petromyzon_marinus
ENSFALG00000000543PABPC49995.943ENSPCIG00000020674PABPC410095.714Phascolarctos_cinereus
ENSFALG00000000543PABPC410084.409ENSPFOG00000002682pabpc49985.669Poecilia_formosa
ENSFALG00000000543PABPC410084.567ENSPLAG00000010112pabpc49985.827Poecilia_latipinna
ENSFALG00000000543PABPC49985.056ENSPMEG00000019739pabpc49985.669Poecilia_mexicana
ENSFALG00000000543PABPC410085.354ENSPREG00000001589pabpc49985.984Poecilia_reticulata
ENSFALG00000000543PABPC410086.950ENSPPYG00000001506PABPC49986.950Pongo_abelii
ENSFALG00000000543PABPC410082.398ENSPCAG00000003341PABPC49982.398Procavia_capensis
ENSFALG00000000543PABPC49971.503ENSPCOG00000025882-9586.000Propithecus_coquereli
ENSFALG00000000543PABPC410090.174ENSPCOG00000023725-9990.333Propithecus_coquereli
ENSFALG00000000543PABPC49986.195ENSPVAG00000002187PABPC49986.195Pteropus_vampyrus
ENSFALG00000000543PABPC410085.804ENSPNYG00000006134pabpc49985.423Pundamilia_nyererei
ENSFALG00000000543PABPC410085.759ENSPNAG00000024355pabpc410086.385Pygocentrus_nattereri
ENSFALG00000000543PABPC410085.537ENSRNOG00000028592AABR07035074.19985.537Rattus_norvegicus
ENSFALG00000000543PABPC410087.403ENSRNOG00000015642Pabpc49987.403Rattus_norvegicus
ENSFALG00000000543PABPC410090.952ENSRBIG00000039761PABPC49990.952Rhinopithecus_bieti
ENSFALG00000000543PABPC410090.952ENSRROG00000033355PABPC49990.952Rhinopithecus_roxellana
ENSFALG00000000543PABPC410090.952ENSSBOG00000026193PABPC49990.952Saimiri_boliviensis_boliviensis
ENSFALG00000000543PABPC410092.857ENSSHAG00000018139PABPC410092.857Sarcophilus_harrisii
ENSFALG00000000543PABPC49988.158ENSSFOG00015023514pabpc49988.158Scleropages_formosus
ENSFALG00000000543PABPC49985.103ENSSMAG00000009007pabpc49985.150Scophthalmus_maximus
ENSFALG00000000543PABPC49985.510ENSSDUG00000012683pabpc49985.489Seriola_dumerili
ENSFALG00000000543PABPC49985.510ENSSLDG00000013025pabpc49985.489Seriola_lalandi_dorsalis
ENSFALG00000000543PABPC410080.273ENSSARG00000000310PABPC49980.273Sorex_araneus
ENSFALG00000000543PABPC410095.231ENSSPUG00000003204PABPC410095.231Sphenodon_punctatus
ENSFALG00000000543PABPC49985.987ENSSPAG00000009252pabpc49985.962Stegastes_partitus
ENSFALG00000000543PABPC410091.111ENSSSCG00000003660-9991.111Sus_scrofa
ENSFALG00000000543PABPC48946.004ENSSSCG00000036170-9545.826Sus_scrofa
ENSFALG00000000543PABPC410094.545ENSTGUG00000001266PABPC410094.545Taeniopygia_guttata
ENSFALG00000000543PABPC49985.127ENSTRUG00000005907pabpc49985.759Takifugu_rubripes
ENSFALG00000000543PABPC49981.659ENSTNIG00000016902pabpc49981.659Tetraodon_nigroviridis
ENSFALG00000000543PABPC49976.599ENSTBEG00000009035PABPC49976.599Tupaia_belangeri
ENSFALG00000000543PABPC49966.667ENSTTRG00000014340PABPC49975.253Tursiops_truncatus
ENSFALG00000000543PABPC410091.111ENSUAMG00000000303PABPC49991.111Ursus_americanus
ENSFALG00000000543PABPC410090.315ENSUMAG00000019585PABPC49992.233Ursus_maritimus
ENSFALG00000000543PABPC47971.091ENSVPAG00000010041PABPC47371.091Vicugna_pacos
ENSFALG00000000543PABPC410091.111ENSVVUG00000005215PABPC49991.111Vulpes_vulpes
ENSFALG00000000543PABPC410087.281ENSXETG00000010946pabpc410087.281Xenopus_tropicalis
ENSFALG00000000543PABPC45898.810ENSXETG00000027221-10098.810Xenopus_tropicalis
ENSFALG00000000543PABPC49990.909ENSXCOG00000013190pabpc49691.509Xiphophorus_couchianus
ENSFALG00000000543PABPC410085.197ENSXMAG00000019007pabpc49985.827Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us