EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000000930 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 12131 bases
Position: chrJH603315.1:1582342-1594472
Accession: 101817225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000000979	RRM_1	PF00076.22	1.6e-14	1	1
ENSFALP00000000979	RRM_3	PF08777.11	3.3e-27	1	1
ENSFALP00000000979	La	PF05383.17	4.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000000984	SSB-201	5795	-	ENSFALP00000000979	405 (aa)	XP_005049430	U3JDX5

Gene Model

Click here to download ENSFALG00000000930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000000930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000000930	SSB	100	74.817	ENSG00000138385	SSB	100	78.333	Homo_sapiens
ENSFALG00000000930	SSB	99	55.283	ENSAPOG00000003448	ssb	99	55.037	Acanthochromis_polyacanthus
ENSFALG00000000930	SSB	100	72.749	ENSAMEG00000010507	SSB	100	70.379	Ailuropoda_melanoleuca
ENSFALG00000000930	SSB	92	58.021	ENSACIG00000001738	ssb	97	58.289	Amphilophus_citrinellus
ENSFALG00000000930	SSB	99	55.283	ENSAOCG00000020398	ssb	99	55.528	Amphiprion_ocellaris
ENSFALG00000000930	SSB	99	55.528	ENSAPEG00000020395	ssb	99	55.774	Amphiprion_percula
ENSFALG00000000930	SSB	99	58.231	ENSATEG00000016884	ssb	99	58.477	Anabas_testudineus
ENSFALG00000000930	SSB	100	89.151	ENSAPLG00000006109	SSB	100	87.028	Anas_platyrhynchos
ENSFALG00000000930	SSB	100	69.175	ENSACAG00000017008	SSB	99	68.627	Anolis_carolinensis
ENSFALG00000000930	SSB	100	66.502	ENSANAG00000027195	-	100	66.502	Aotus_nancymaae
ENSFALG00000000930	SSB	99	54.591	ENSACLG00000010798	ssb	99	54.591	Astatotilapia_calliptera
ENSFALG00000000930	SSB	99	54.988	ENSAMXG00000012606	ssb	99	56.796	Astyanax_mexicanus
ENSFALG00000000930	SSB	100	75.430	ENSBTAG00000008716	SSB	100	75.430	Bos_taurus
ENSFALG00000000930	SSB	74	37.500	WBGene00016653	C44E4.4	76	38.411	Caenorhabditis_elegans
ENSFALG00000000930	SSB	100	74.817	ENSCJAG00000045073	SSB	100	73.659	Callithrix_jacchus
ENSFALG00000000930	SSB	100	75.490	ENSCAFG00000012418	SSB	100	75.490	Canis_familiaris
ENSFALG00000000930	SSB	100	75.490	ENSCAFG00020002900	SSB	100	75.490	Canis_lupus_dingo
ENSFALG00000000930	SSB	100	75.921	ENSCHIG00000022624	-	100	75.921	Capra_hircus
ENSFALG00000000930	SSB	100	71.007	ENSCHIG00000022196	-	100	71.007	Capra_hircus
ENSFALG00000000930	SSB	100	75.184	ENSTSYG00000000097	SSB	100	74.020	Carlito_syrichta
ENSFALG00000000930	SSB	100	77.017	ENSCPOG00000003338	SSB	100	75.854	Cavia_porcellus
ENSFALG00000000930	SSB	100	75.061	ENSCCAG00000035147	SSB	100	73.902	Cebus_capucinus
ENSFALG00000000930	SSB	78	68.072	ENSCATG00000036701	SSB	93	66.667	Cercocebus_atys
ENSFALG00000000930	SSB	100	55.774	ENSCATG00000042909	-	100	55.037	Cercocebus_atys
ENSFALG00000000930	SSB	100	76.284	ENSCLAG00000015617	-	100	75.122	Chinchilla_lanigera
ENSFALG00000000930	SSB	100	74.817	ENSCSAG00000015200	SSB	89	73.659	Chlorocebus_sabaeus
ENSFALG00000000930	SSB	98	67.920	ENSCSAG00000018390	-	100	67.500	Chlorocebus_sabaeus
ENSFALG00000000930	SSB	100	75.184	ENSCHOG00000007763	SSB	100	75.184	Choloepus_hoffmanni
ENSFALG00000000930	SSB	100	86.064	ENSCPBG00000006519	SSB	100	86.308	Chrysemys_picta_bellii
ENSFALG00000000930	SSB	96	59.079	ENSCANG00000028838	-	93	59.079	Colobus_angolensis_palliatus
ENSFALG00000000930	SSB	100	74.817	ENSCANG00000027695	SSB	100	74.817	Colobus_angolensis_palliatus
ENSFALG00000000930	SSB	99	64.516	ENSCANG00000033240	-	99	64.356	Colobus_angolensis_palliatus
ENSFALG00000000930	SSB	99	66.912	ENSCGRG00001024831	Ssb	99	65.931	Cricetulus_griseus_chok1gshd
ENSFALG00000000930	SSB	99	66.912	ENSCGRG00000005387	Ssb	99	65.931	Cricetulus_griseus_crigri
ENSFALG00000000930	SSB	97	56.281	ENSCSEG00000011599	ssb	99	56.250	Cynoglossus_semilaevis
ENSFALG00000000930	SSB	99	57.353	ENSCVAG00000021558	ssb	99	57.598	Cyprinodon_variegatus
ENSFALG00000000930	SSB	99	58.722	ENSDARG00000029252	ssb	99	58.722	Danio_rerio
ENSFALG00000000930	SSB	100	75.430	ENSDNOG00000013450	SSB	100	75.430	Dasypus_novemcinctus
ENSFALG00000000930	SSB	100	68.281	ENSDORG00000005543	Ssb	100	66.102	Dipodomys_ordii
ENSFALG00000000930	SSB	81	34.111	FBgn0011638	La	66	36.861	Drosophila_melanogaster
ENSFALG00000000930	SSB	50	77.114	ENSETEG00000004614	-	52	77.114	Echinops_telfairi
ENSFALG00000000930	SSB	88	48.739	ENSEBUG00000001237	ssb	92	47.339	Eptatretus_burgeri
ENSFALG00000000930	SSB	100	75.921	ENSEASG00005022835	SSB	100	75.921	Equus_asinus_asinus
ENSFALG00000000930	SSB	100	75.676	ENSECAG00000018495	SSB	100	75.676	Equus_caballus
ENSFALG00000000930	SSB	76	61.438	ENSEEUG00000008077	SSB	78	61.438	Erinaceus_europaeus
ENSFALG00000000930	SSB	99	62.808	ENSELUG00000020929	ssb	99	62.562	Esox_lucius
ENSFALG00000000930	SSB	100	75.245	ENSFCAG00000011601	SSB	100	75.245	Felis_catus
ENSFALG00000000930	SSB	100	75.430	ENSFDAG00000000598	SSB	100	74.265	Fukomys_damarensis
ENSFALG00000000930	SSB	72	55.184	ENSFHEG00000003268	ssb	95	54.248	Fundulus_heteroclitus
ENSFALG00000000930	SSB	97	55.419	ENSGMOG00000002664	ssb	99	53.465	Gadus_morhua
ENSFALG00000000930	SSB	100	94.089	ENSGALG00000009677	SSB	100	93.350	Gallus_gallus
ENSFALG00000000930	SSB	99	55.037	ENSGAFG00000002749	ssb	99	54.791	Gambusia_affinis
ENSFALG00000000930	SSB	97	55.882	ENSGACG00000005107	ssb	99	55.037	Gasterosteus_aculeatus
ENSFALG00000000930	SSB	100	85.575	ENSGAGG00000007807	SSB	100	85.819	Gopherus_agassizii
ENSFALG00000000930	SSB	55	72.124	ENSGGOG00000023471	-	92	70.044	Gorilla_gorilla
ENSFALG00000000930	SSB	100	61.125	ENSGGOG00000024891	-	100	60.732	Gorilla_gorilla
ENSFALG00000000930	SSB	99	54.591	ENSHBUG00000006584	ssb	99	54.591	Haplochromis_burtoni
ENSFALG00000000930	SSB	100	74.519	ENSHGLG00000017580	-	100	72.115	Heterocephalus_glaber_female
ENSFALG00000000930	SSB	100	69.363	ENSHGLG00000004478	-	100	68.059	Heterocephalus_glaber_female
ENSFALG00000000930	SSB	100	67.322	ENSHGLG00000005832	-	100	66.176	Heterocephalus_glaber_female
ENSFALG00000000930	SSB	100	74.519	ENSHGLG00100003084	-	100	72.115	Heterocephalus_glaber_male
ENSFALG00000000930	SSB	100	66.995	ENSHGLG00100008767	-	100	66.995	Heterocephalus_glaber_male
ENSFALG00000000930	SSB	97	55.164	ENSHCOG00000019011	ssb	99	56.171	Hippocampus_comes
ENSFALG00000000930	SSB	97	59.850	ENSIPUG00000003681	SSB	98	59.850	Ictalurus_punctatus
ENSFALG00000000930	SSB	100	75.369	ENSSTOG00000008416	SSB	100	75.369	Ictidomys_tridecemlineatus
ENSFALG00000000930	SSB	99	53.846	ENSJJAG00000016250	-	99	53.465	Jaculus_jaculus
ENSFALG00000000930	SSB	99	65.083	ENSJJAG00000023158	-	99	62.708	Jaculus_jaculus
ENSFALG00000000930	SSB	99	56.511	ENSKMAG00000017317	ssb	98	57.000	Kryptolebias_marmoratus
ENSFALG00000000930	SSB	99	56.265	ENSLBEG00000017345	ssb	99	57.002	Labrus_bergylta
ENSFALG00000000930	SSB	99	69.287	ENSLACG00000014056	SSB	99	67.813	Latimeria_chalumnae
ENSFALG00000000930	SSB	97	67.588	ENSLOCG00000007933	ssb	98	67.839	Lepisosteus_oculatus
ENSFALG00000000930	SSB	100	63.300	ENSLAFG00000028909	-	100	62.222	Loxodonta_africana
ENSFALG00000000930	SSB	100	70.449	ENSLAFG00000000867	-	100	69.031	Loxodonta_africana
ENSFALG00000000930	SSB	75	58.609	ENSLAFG00000026721	-	99	58.609	Loxodonta_africana
ENSFALG00000000930	SSB	88	65.546	ENSMFAG00000041478	-	91	66.871	Macaca_fascicularis
ENSFALG00000000930	SSB	100	74.817	ENSMFAG00000039066	SSB	100	73.659	Macaca_fascicularis
ENSFALG00000000930	SSB	100	74.817	ENSMMUG00000023051	SSB	100	73.659	Macaca_mulatta
ENSFALG00000000930	SSB	100	63.547	ENSMMUG00000011724	-	97	61.481	Macaca_mulatta
ENSFALG00000000930	SSB	99	51.605	ENSMMUG00000039889	-	100	51.358	Macaca_mulatta
ENSFALG00000000930	SSB	88	65.546	ENSMNEG00000034698	-	91	66.871	Macaca_nemestrina
ENSFALG00000000930	SSB	100	63.415	ENSMNEG00000028321	SSB	100	63.592	Macaca_nemestrina
ENSFALG00000000930	SSB	100	74.817	ENSMLEG00000035717	SSB	100	73.659	Mandrillus_leucophaeus
ENSFALG00000000930	SSB	100	53.448	ENSMLEG00000042644	-	100	51.961	Mandrillus_leucophaeus
ENSFALG00000000930	SSB	99	57.248	ENSMAMG00000004800	ssb	99	57.494	Mastacembelus_armatus
ENSFALG00000000930	SSB	99	54.591	ENSMZEG00005005749	ssb	99	54.591	Maylandia_zebra
ENSFALG00000000930	SSB	100	94.335	ENSMGAG00000010328	SSB	100	95.146	Meleagris_gallopavo
ENSFALG00000000930	SSB	98	69.674	ENSMICG00000033304	-	93	72.603	Microcebus_murinus
ENSFALG00000000930	SSB	99	75.430	ENSMICG00000028252	-	99	74.265	Microcebus_murinus
ENSFALG00000000930	SSB	100	72.488	ENSMODG00000008227	-	100	69.856	Monodelphis_domestica
ENSFALG00000000930	SSB	85	77.358	ENSMODG00000019271	-	99	77.358	Monodelphis_domestica
ENSFALG00000000930	SSB	100	58.333	ENSMODG00000007027	-	100	58.333	Monodelphis_domestica
ENSFALG00000000930	SSB	89	54.667	ENSMALG00000008045	ssb	88	58.470	Monopterus_albus
ENSFALG00000000930	SSB	99	65.632	MGP_CAROLIEiJ_G0023629	-	100	75.543	Mus_caroli
ENSFALG00000000930	SSB	99	64.916	ENSMUSG00000068882	Ssb	100	75.543	Mus_musculus
ENSFALG00000000930	SSB	99	64.593	MGP_PahariEiJ_G0025081	-	100	75.000	Mus_pahari
ENSFALG00000000930	SSB	99	64.916	MGP_SPRETEiJ_G0024551	Ssb	100	75.543	Mus_spretus
ENSFALG00000000930	SSB	100	76.167	ENSMPUG00000000785	SSB	100	76.167	Mustela_putorius_furo
ENSFALG00000000930	SSB	100	72.749	ENSMLUG00000016316	SSB	100	70.142	Myotis_lucifugus
ENSFALG00000000930	SSB	99	54.591	ENSNBRG00000012661	ssb	99	54.591	Neolamprologus_brichardi
ENSFALG00000000930	SSB	89	59.557	ENSNLEG00000028754	-	100	55.340	Nomascus_leucogenys
ENSFALG00000000930	SSB	100	74.817	ENSNLEG00000004958	SSB	100	73.659	Nomascus_leucogenys
ENSFALG00000000930	SSB	61	81.048	ENSMEUG00000001650	-	100	81.048	Notamacropus_eugenii
ENSFALG00000000930	SSB	72	57.877	ENSOPRG00000008475	-	100	57.534	Ochotona_princeps
ENSFALG00000000930	SSB	93	73.016	ENSODEG00000004202	-	99	71.618	Octodon_degus
ENSFALG00000000930	SSB	99	55.583	ENSONIG00000008776	ssb	99	55.831	Oreochromis_niloticus
ENSFALG00000000930	SSB	99	76.427	ENSOANG00000008543	SSB	99	76.427	Ornithorhynchus_anatinus
ENSFALG00000000930	SSB	100	74.693	ENSOCUG00000010396	SSB	100	72.727	Oryctolagus_cuniculus
ENSFALG00000000930	SSB	99	56.511	ENSORLG00000017208	ssb	99	56.265	Oryzias_latipes
ENSFALG00000000930	SSB	99	57.002	ENSORLG00020022574	ssb	99	56.265	Oryzias_latipes_hni
ENSFALG00000000930	SSB	99	56.265	ENSORLG00015016592	ssb	99	56.020	Oryzias_latipes_hsok
ENSFALG00000000930	SSB	99	57.635	ENSOMEG00000003193	ssb	99	58.128	Oryzias_melastigma
ENSFALG00000000930	SSB	100	70.657	ENSOGAG00000029768	SSB	100	68.545	Otolemur_garnettii
ENSFALG00000000930	SSB	100	76.167	ENSOARG00000002906	SSB	100	76.167	Ovis_aries
ENSFALG00000000930	SSB	88	61.560	ENSPPAG00000006189	-	92	59.777	Pan_paniscus
ENSFALG00000000930	SSB	100	60.391	ENSPPAG00000032427	-	100	68.217	Pan_paniscus
ENSFALG00000000930	SSB	100	74.817	ENSPPAG00000042673	SSB	100	73.659	Pan_paniscus
ENSFALG00000000930	SSB	100	75.245	ENSPPRG00000006599	SSB	100	75.245	Panthera_pardus
ENSFALG00000000930	SSB	100	75.245	ENSPTIG00000011021	SSB	97	75.245	Panthera_tigris_altaica
ENSFALG00000000930	SSB	100	58.293	ENSPTRG00000042880	-	100	56.098	Pan_troglodytes
ENSFALG00000000930	SSB	100	74.817	ENSPTRG00000012620	SSB	100	73.659	Pan_troglodytes
ENSFALG00000000930	SSB	100	74.817	ENSPANG00000007440	SSB	100	73.659	Papio_anubis
ENSFALG00000000930	SSB	96	54.242	ENSPANG00000031877	-	92	53.608	Papio_anubis
ENSFALG00000000930	SSB	100	54.926	ENSPANG00000034126	-	100	55.172	Papio_anubis
ENSFALG00000000930	SSB	99	64.303	ENSPKIG00000019325	ssb	100	64.548	Paramormyrops_kingsleyae
ENSFALG00000000930	SSB	100	83.374	ENSPSIG00000002265	SSB	93	83.619	Pelodiscus_sinensis
ENSFALG00000000930	SSB	86	52.691	ENSPMGG00000020075	ssb	92	54.674	Periophthalmus_magnuspinnatus
ENSFALG00000000930	SSB	99	47.552	ENSPMAG00000002982	ssb	100	47.319	Petromyzon_marinus
ENSFALG00000000930	SSB	100	74.328	ENSPCIG00000028591	-	100	74.817	Phascolarctos_cinereus
ENSFALG00000000930	SSB	99	56.265	ENSPFOG00000009650	ssb	99	56.020	Poecilia_formosa
ENSFALG00000000930	SSB	99	56.020	ENSPLAG00000020498	ssb	99	56.511	Poecilia_latipinna
ENSFALG00000000930	SSB	99	56.020	ENSPMEG00000001051	ssb	99	55.774	Poecilia_mexicana
ENSFALG00000000930	SSB	91	57.784	ENSPREG00000003708	ssb	98	57.520	Poecilia_reticulata
ENSFALG00000000930	SSB	100	74.817	ENSPPYG00000012919	SSB	100	73.659	Pongo_abelii
ENSFALG00000000930	SSB	95	72.610	ENSPCAG00000010276	SSB	100	72.610	Procavia_capensis
ENSFALG00000000930	SSB	100	66.259	ENSPCOG00000023189	-	100	65.122	Propithecus_coquereli
ENSFALG00000000930	SSB	100	71.883	ENSPCOG00000015741	-	100	70.905	Propithecus_coquereli
ENSFALG00000000930	SSB	85	78.261	ENSPVAG00000006615	SSB	98	78.261	Pteropus_vampyrus
ENSFALG00000000930	SSB	99	54.591	ENSPNYG00000006444	ssb	99	54.591	Pundamilia_nyererei
ENSFALG00000000930	SSB	99	56.235	ENSPNAG00000011708	ssb	99	56.968	Pygocentrus_nattereri
ENSFALG00000000930	SSB	99	65.271	ENSRNOG00000011606	AABR07061825.1	99	64.039	Rattus_norvegicus
ENSFALG00000000930	SSB	99	64.678	ENSRNOG00000007998	Ssb	99	62.768	Rattus_norvegicus
ENSFALG00000000930	SSB	89	69.041	ENSRBIG00000041608	-	98	66.758	Rhinopithecus_bieti
ENSFALG00000000930	SSB	93	63.395	ENSRBIG00000041232	-	97	62.963	Rhinopithecus_bieti
ENSFALG00000000930	SSB	100	52.826	ENSRBIG00000029918	-	100	55.882	Rhinopithecus_bieti
ENSFALG00000000930	SSB	100	61.353	ENSRBIG00000041972	SSB	88	76.522	Rhinopithecus_bieti
ENSFALG00000000930	SSB	97	64.213	ENSRROG00000031684	-	99	63.797	Rhinopithecus_roxellana
ENSFALG00000000930	SSB	100	61.520	ENSRROG00000007149	-	100	61.520	Rhinopithecus_roxellana
ENSFALG00000000930	SSB	89	71.858	ENSRROG00000034102	-	98	67.662	Rhinopithecus_roxellana
ENSFALG00000000930	SSB	100	74.817	ENSRROG00000040346	SSB	100	74.817	Rhinopithecus_roxellana
ENSFALG00000000930	SSB	100	75.061	ENSSBOG00000027204	SSB	100	73.902	Saimiri_boliviensis_boliviensis
ENSFALG00000000930	SSB	100	74.328	ENSSHAG00000018062	SSB	100	74.817	Sarcophilus_harrisii
ENSFALG00000000930	SSB	99	63.235	ENSSFOG00015000550	ssb	99	63.235	Scleropages_formosus
ENSFALG00000000930	SSB	97	54.198	ENSSMAG00000013885	ssb	99	57.373	Scophthalmus_maximus
ENSFALG00000000930	SSB	99	58.231	ENSSDUG00000020117	ssb	99	58.722	Seriola_dumerili
ENSFALG00000000930	SSB	99	55.941	ENSSLDG00000002525	ssb	99	55.941	Seriola_lalandi_dorsalis
ENSFALG00000000930	SSB	95	67.969	ENSSARG00000007747	SSB	100	67.969	Sorex_araneus
ENSFALG00000000930	SSB	100	80.296	ENSSPUG00000012112	SSB	100	80.296	Sphenodon_punctatus
ENSFALG00000000930	SSB	99	55.528	ENSSPAG00000005696	ssb	99	55.774	Stegastes_partitus
ENSFALG00000000930	SSB	98	66.165	ENSSSCG00000015938	SSB	98	65.414	Sus_scrofa
ENSFALG00000000930	SSB	100	97.543	ENSTGUG00000007942	SSB	100	97.543	Taeniopygia_guttata
ENSFALG00000000930	SSB	99	57.284	ENSTRUG00000017839	ssb	99	57.284	Takifugu_rubripes
ENSFALG00000000930	SSB	90	60.274	ENSTNIG00000000915	ssb	99	59.726	Tetraodon_nigroviridis
ENSFALG00000000930	SSB	82	76.522	ENSTBEG00000009056	SSB	82	76.522	Tupaia_belangeri
ENSFALG00000000930	SSB	100	75.245	ENSTTRG00000002152	SSB	100	75.000	Tursiops_truncatus
ENSFALG00000000930	SSB	91	77.957	ENSUAMG00000027833	SSB	97	77.989	Ursus_americanus
ENSFALG00000000930	SSB	100	75.735	ENSUMAG00000013907	SSB	100	75.735	Ursus_maritimus
ENSFALG00000000930	SSB	100	74.693	ENSVPAG00000007183	SSB	100	74.693	Vicugna_pacos
ENSFALG00000000930	SSB	100	75.490	ENSVVUG00000016573	SSB	78	75.490	Vulpes_vulpes
ENSFALG00000000930	SSB	99	61.033	ENSXETG00000025402	ssb	99	59.294	Xenopus_tropicalis
ENSFALG00000000930	SSB	94	54.948	ENSXCOG00000019109	ssb	93	62.500	Xiphophorus_couchianus
ENSFALG00000000930	SSB	99	56.479	ENSXMAG00000004888	ssb	99	56.235	Xiphophorus_maculatus