EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000001000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 12387 bases
Position: chrJH603290.1:1103883-1116269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001042	zf-C2H2	PF00096.26	7.1e-32	1	4
ENSFALP00000001042	zf-C2H2	PF00096.26	7.1e-32	2	4
ENSFALP00000001042	zf-C2H2	PF00096.26	7.1e-32	3	4
ENSFALP00000001042	zf-C2H2	PF00096.26	7.1e-32	4	4
ENSFALP00000001042	zf-met	PF12874.7	4.6e-08	1	2
ENSFALP00000001042	zf-met	PF12874.7	4.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001047	-	2955	-	ENSFALP00000001042	685 (aa)	-	U3JE38

Gene Model

Click here to download ENSFALG00000001000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000001000	-	59	32.500	ENSFALG00000002807	ZBTB41	56	32.955
ENSFALG00000001000	-	53	35.401	ENSFALG00000008628	MYNN	52	39.013
ENSFALG00000001000	-	71	42.424	ENSFALG00000007003	ZNF652	97	46.389
ENSFALG00000001000	-	56	35.185	ENSFALG00000014495	HIC2	50	35.294
ENSFALG00000001000	-	56	36.025	ENSFALG00000010031	ZBTB16	57	36.025
ENSFALG00000001000	-	55	41.414	ENSFALG00000011128	ZNF131	58	31.548
ENSFALG00000001000	-	91	36.777	ENSFALG00000011851	ZBTB24	61	36.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001000	-	62	82.329	ENSG00000198740	ZNF652	76	91.748	Homo_sapiens
ENSFALG00000001000	-	79	56.696	ENSAPOG00000002478	znf652	50	74.269	Acanthochromis_polyacanthus
ENSFALG00000001000	-	83	54.592	ENSAMEG00000012387	ZNF652	82	58.071	Ailuropoda_melanoleuca
ENSFALG00000001000	-	64	66.517	ENSACIG00000009180	znf652	73	58.835	Amphilophus_citrinellus
ENSFALG00000001000	-	72	59.357	ENSAOCG00000023414	znf652	73	59.808	Amphiprion_ocellaris
ENSFALG00000001000	-	72	57.621	ENSAPEG00000003431	znf652	73	58.412	Amphiprion_percula
ENSFALG00000001000	-	72	58.998	ENSATEG00000000589	znf652	86	91.322	Anabas_testudineus
ENSFALG00000001000	-	83	49.228	ENSACAG00000006063	ZNF652	79	58.845	Anolis_carolinensis
ENSFALG00000001000	-	84	50.171	ENSANAG00000031074	ZNF652	82	57.944	Aotus_nancymaae
ENSFALG00000001000	-	83	55.119	ENSBTAG00000001919	ZNF652	88	57.067	Bos_taurus
ENSFALG00000001000	-	84	50.171	ENSCJAG00000007206	ZNF652	99	58.902	Callithrix_jacchus
ENSFALG00000001000	-	84	56.507	ENSCAFG00000016924	ZNF652	82	58.209	Canis_familiaris
ENSFALG00000001000	-	84	56.314	ENSCAFG00020023420	ZNF652	82	42.986	Canis_lupus_dingo
ENSFALG00000001000	-	83	54.855	ENSCHIG00000025825	ZNF652	82	58.801	Capra_hircus
ENSFALG00000001000	-	84	54.252	ENSTSYG00000010857	ZNF652	52	79.245	Carlito_syrichta
ENSFALG00000001000	-	82	52.667	ENSCPOG00000039975	ZNF652	62	68.878	Cavia_porcellus
ENSFALG00000001000	-	84	55.385	ENSCCAG00000034341	ZNF652	83	56.957	Cebus_capucinus
ENSFALG00000001000	-	78	56.932	ENSCLAG00000013368	ZNF652	93	43.238	Chinchilla_lanigera
ENSFALG00000001000	-	76	55.159	ENSCHOG00000001604	ZNF652	77	48.534	Choloepus_hoffmanni
ENSFALG00000001000	-	84	55.631	ENSCPBG00000027302	ZNF652	82	58.813	Chrysemys_picta_bellii
ENSFALG00000001000	-	83	53.950	ENSCGRG00001018513	Zfp652	87	57.345	Cricetulus_griseus_chok1gshd
ENSFALG00000001000	-	83	53.950	ENSCGRG00000003258	Zfp652	87	57.345	Cricetulus_griseus_crigri
ENSFALG00000001000	-	70	59.100	ENSCVAG00000012398	znf652	72	60.800	Cyprinodon_variegatus
ENSFALG00000001000	-	71	60.388	ENSDARG00000062302	znf652	81	89.950	Danio_rerio
ENSFALG00000001000	-	84	55.214	ENSDNOG00000016747	ZNF652	93	44.765	Dasypus_novemcinctus
ENSFALG00000001000	-	83	54.068	ENSDORG00000028287	Zfp652	51	78.616	Dipodomys_ordii
ENSFALG00000001000	-	76	40.211	ENSETEG00000017186	ZNF652	72	54.043	Echinops_telfairi
ENSFALG00000001000	-	83	54.905	ENSEASG00005000231	ZNF652	83	42.857	Equus_asinus_asinus
ENSFALG00000001000	-	83	54.905	ENSECAG00000016968	ZNF652	97	47.664	Equus_caballus
ENSFALG00000001000	-	85	56.239	ENSFCAG00000000115	ZNF652	82	42.599	Felis_catus
ENSFALG00000001000	-	76	53.684	ENSFDAG00000016798	ZNF652	89	55.180	Fukomys_damarensis
ENSFALG00000001000	-	52	90.777	ENSFHEG00000013320	znf652	74	59.091	Fundulus_heteroclitus
ENSFALG00000001000	-	63	65.402	ENSGMOG00000014245	znf652	71	63.975	Gadus_morhua
ENSFALG00000001000	-	71	61.382	ENSGACG00000009154	znf652	72	60.156	Gasterosteus_aculeatus
ENSFALG00000001000	-	84	55.973	ENSGAGG00000021631	ZNF652	82	58.813	Gopherus_agassizii
ENSFALG00000001000	-	72	60.381	ENSHBUG00000023595	znf652	73	61.479	Haplochromis_burtoni
ENSFALG00000001000	-	82	53.613	ENSHGLG00000010452	ZNF652	84	42.087	Heterocephalus_glaber_female
ENSFALG00000001000	-	93	57.522	ENSHGLG00000011323	-	93	65.778	Heterocephalus_glaber_female
ENSFALG00000001000	-	82	53.613	ENSHGLG00100009030	ZNF652	83	42.068	Heterocephalus_glaber_male
ENSFALG00000001000	-	76	45.693	ENSHCOG00000017736	znf652	50	69.632	Hippocampus_comes
ENSFALG00000001000	-	84	54.932	ENSSTOG00000011303	ZNF652	53	77.778	Ictidomys_tridecemlineatus
ENSFALG00000001000	-	84	54.377	ENSJJAG00000010496	Zfp652	83	42.473	Jaculus_jaculus
ENSFALG00000001000	-	72	58.333	ENSKMAG00000020997	znf652	78	59.082	Kryptolebias_marmoratus
ENSFALG00000001000	-	55	79.297	ENSLBEG00000005729	znf652	83	91.322	Labrus_bergylta
ENSFALG00000001000	-	84	49.834	ENSLACG00000007479	ZNF652	83	53.680	Latimeria_chalumnae
ENSFALG00000001000	-	63	63.820	ENSLOCG00000011452	znf652	91	52.403	Lepisosteus_oculatus
ENSFALG00000001000	-	100	74.928	ENSLOCG00000009647	-	88	74.686	Lepisosteus_oculatus
ENSFALG00000001000	-	84	80.635	ENSLAFG00000010084	ZNF652	82	77.090	Loxodonta_africana
ENSFALG00000001000	-	84	42.393	ENSMNEG00000037260	ZNF652	83	35.651	Macaca_nemestrina
ENSFALG00000001000	-	82	55.145	ENSMAMG00000022207	znf652	80	58.885	Mastacembelus_armatus
ENSFALG00000001000	-	72	69.604	ENSMZEG00005022876	znf652	70	51.758	Maylandia_zebra
ENSFALG00000001000	-	82	55.651	ENSMAUG00000009337	Zfp652	87	57.597	Mesocricetus_auratus
ENSFALG00000001000	-	82	54.983	ENSMOCG00000017054	Zfp652	56	75.942	Microtus_ochrogaster
ENSFALG00000001000	-	72	54.972	ENSMMOG00000020807	znf652	73	57.280	Mola_mola
ENSFALG00000001000	-	84	55.268	ENSMODG00000012215	ZNF652	82	58.380	Monodelphis_domestica
ENSFALG00000001000	-	82	53.577	ENSMUSG00000075595	Zfp652	97	52.401	Mus_musculus
ENSFALG00000001000	-	83	54.790	MGP_PahariEiJ_G0018140	Zfp652	54	85.837	Mus_pahari
ENSFALG00000001000	-	82	53.577	MGP_SPRETEiJ_G0017856	Zfp652	87	56.021	Mus_spretus
ENSFALG00000001000	-	84	55.857	ENSMPUG00000015376	ZNF652	52	78.571	Mustela_putorius_furo
ENSFALG00000001000	-	83	54.096	ENSMLUG00000012963	ZNF652	82	58.491	Myotis_lucifugus
ENSFALG00000001000	-	82	54.096	ENSNGAG00000010366	Zfp652	81	58.192	Nannospalax_galili
ENSFALG00000001000	-	72	60.000	ENSNBRG00000020034	znf652	75	58.935	Neolamprologus_brichardi
ENSFALG00000001000	-	76	37.342	ENSNLEG00000027071	ZNF652	89	54.158	Nomascus_leucogenys
ENSFALG00000001000	-	85	54.146	ENSODEG00000017173	ZNF652	94	68.653	Octodon_degus
ENSFALG00000001000	-	72	59.961	ENSONIG00000000921	znf652	86	35.544	Oreochromis_niloticus
ENSFALG00000001000	-	82	54.188	ENSOCUG00000002965	ZNF652	88	42.275	Oryctolagus_cuniculus
ENSFALG00000001000	-	79	57.321	ENSOMEG00000021975	znf652	58	78.154	Oryzias_melastigma
ENSFALG00000001000	-	83	48.639	ENSOGAG00000003574	ZNF652	53	66.564	Otolemur_garnettii
ENSFALG00000001000	-	84	54.698	ENSOARG00000006129	ZNF652	88	58.801	Ovis_aries
ENSFALG00000001000	-	85	55.973	ENSPPRG00000011680	ZNF652	52	78.931	Panthera_pardus
ENSFALG00000001000	-	85	55.877	ENSPTIG00000010615	ZNF652	82	57.276	Panthera_tigris_altaica
ENSFALG00000001000	-	76	45.966	ENSPTRG00000043048	ZNF652	99	44.708	Pan_troglodytes
ENSFALG00000001000	-	67	62.372	ENSPKIG00000020793	znf652	70	64.403	Paramormyrops_kingsleyae
ENSFALG00000001000	-	56	68.733	ENSPMGG00000007801	znf652	50	77.500	Periophthalmus_magnuspinnatus
ENSFALG00000001000	-	83	50.000	ENSPEMG00000020862	Zfp652	87	56.383	Peromyscus_maniculatus_bairdii
ENSFALG00000001000	-	66	82.143	ENSPCAG00000000243	ZNF652	64	91.915	Procavia_capensis
ENSFALG00000001000	-	84	54.872	ENSPVAG00000004287	ZNF652	53	77.778	Pteropus_vampyrus
ENSFALG00000001000	-	72	60.381	ENSPNYG00000012373	znf652	73	61.479	Pundamilia_nyererei
ENSFALG00000001000	-	83	54.377	ENSRNOG00000017001	Zfp652	56	76.540	Rattus_norvegicus
ENSFALG00000001000	-	84	49.829	ENSSBOG00000029507	ZNF652	82	57.944	Saimiri_boliviensis_boliviensis
ENSFALG00000001000	-	80	55.676	ENSSHAG00000002263	ZNF652	92	58.192	Sarcophilus_harrisii
ENSFALG00000001000	-	76	58.290	ENSSFOG00015023295	znf652	91	91.286	Scleropages_formosus
ENSFALG00000001000	-	75	55.959	ENSSLDG00000001780	znf652	73	59.160	Seriola_lalandi_dorsalis
ENSFALG00000001000	-	76	47.579	ENSSARG00000000812	ZNF652	59	75.000	Sorex_araneus
ENSFALG00000001000	-	84	43.072	ENSSPUG00000006896	ZNF652	82	58.627	Sphenodon_punctatus
ENSFALG00000001000	-	72	59.168	ENSSPAG00000019134	znf652	73	60.542	Stegastes_partitus
ENSFALG00000001000	-	84	54.669	ENSSSCG00000017546	ZNF652	66	68.475	Sus_scrofa
ENSFALG00000001000	-	66	36.301	ENSTGUG00000003462	ZNF652	100	52.116	Taeniopygia_guttata
ENSFALG00000001000	-	78	56.826	ENSTRUG00000016405	znf652	81	60.962	Takifugu_rubripes
ENSFALG00000001000	-	75	52.675	ENSTNIG00000002892	znf652	56	75.000	Tetraodon_nigroviridis
ENSFALG00000001000	-	83	54.452	ENSTBEG00000010480	ZNF652	83	42.218	Tupaia_belangeri
ENSFALG00000001000	-	82	54.811	ENSTTRG00000004704	ZNF652	82	42.495	Tursiops_truncatus
ENSFALG00000001000	-	82	55.614	ENSUAMG00000024556	ZNF652	85	91.701	Ursus_americanus
ENSFALG00000001000	-	83	54.359	ENSVPAG00000001680	ZNF652	83	42.321	Vicugna_pacos
ENSFALG00000001000	-	84	56.314	ENSVVUG00000003513	ZNF652	82	42.986	Vulpes_vulpes