EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001119 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 10462 bases
Position: chrJH603241.1:3220539-3231000
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001166	tRNA_int_end_N2	PF12928.7	4.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001172	TSEN54-201	2763	-	ENSFALP00000001166	526 (aa)	-	U3JEG2

Gene Model

Click here to download ENSFALG00000001119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001119	TSEN54	99	50.947	ENSG00000182173	TSEN54	100	68.056	Homo_sapiens
ENSFALG00000001119	TSEN54	92	48.283	ENSAPOG00000009659	tsen54	99	45.921	Acanthochromis_polyacanthus
ENSFALG00000001119	TSEN54	98	50.857	ENSAMEG00000009414	TSEN54	97	50.290	Ailuropoda_melanoleuca
ENSFALG00000001119	TSEN54	92	48.171	ENSAOCG00000000152	tsen54	91	47.358	Amphiprion_ocellaris
ENSFALG00000001119	TSEN54	92	48.171	ENSAPEG00000018931	tsen54	91	47.154	Amphiprion_percula
ENSFALG00000001119	TSEN54	92	44.950	ENSATEG00000019860	tsen54	93	44.356	Anabas_testudineus
ENSFALG00000001119	TSEN54	86	80.752	ENSAPLG00000009419	TSEN54	99	80.752	Anas_platyrhynchos
ENSFALG00000001119	TSEN54	96	58.527	ENSACAG00000006714	TSEN54	98	58.721	Anolis_carolinensis
ENSFALG00000001119	TSEN54	96	50.688	ENSANAG00000024061	TSEN54	93	52.525	Aotus_nancymaae
ENSFALG00000001119	TSEN54	92	46.029	ENSACLG00000019800	tsen54	93	45.842	Astatotilapia_calliptera
ENSFALG00000001119	TSEN54	92	49.388	ENSAMXG00000006546	tsen54	93	50.102	Astyanax_mexicanus
ENSFALG00000001119	TSEN54	95	50.984	ENSBTAG00000000824	TSEN54	94	51.703	Bos_taurus
ENSFALG00000001119	TSEN54	96	51.272	ENSCJAG00000014278	TSEN54	93	53.119	Callithrix_jacchus
ENSFALG00000001119	TSEN54	96	51.838	ENSCAFG00000004798	TSEN54	97	52.224	Canis_familiaris
ENSFALG00000001119	TSEN54	96	51.838	ENSCAFG00020000312	TSEN54	97	52.224	Canis_lupus_dingo
ENSFALG00000001119	TSEN54	95	51.992	ENSCHIG00000019908	TSEN54	95	51.491	Capra_hircus
ENSFALG00000001119	TSEN54	86	51.860	ENSTSYG00000037439	TSEN54	99	52.079	Carlito_syrichta
ENSFALG00000001119	TSEN54	96	51.473	ENSCCAG00000036624	TSEN54	93	52.727	Cebus_capucinus
ENSFALG00000001119	TSEN54	95	51.881	ENSCATG00000042877	TSEN54	93	52.918	Cercocebus_atys
ENSFALG00000001119	TSEN54	95	51.650	ENSCLAG00000002924	TSEN54	93	52.174	Chinchilla_lanigera
ENSFALG00000001119	TSEN54	99	50.951	ENSCSAG00000004809	TSEN54	94	53.119	Chlorocebus_sabaeus
ENSFALG00000001119	TSEN54	97	67.113	ENSCPBG00000028071	TSEN54	96	68.379	Chrysemys_picta_bellii
ENSFALG00000001119	TSEN54	99	50.760	ENSCANG00000028053	TSEN54	94	52.716	Colobus_angolensis_palliatus
ENSFALG00000001119	TSEN54	97	51.638	ENSCGRG00001020029	Tsen54	95	51.779	Cricetulus_griseus_chok1gshd
ENSFALG00000001119	TSEN54	84	51.454	ENSCGRG00000016289	Tsen54	100	51.454	Cricetulus_griseus_crigri
ENSFALG00000001119	TSEN54	80	40.654	ENSCSEG00000020586	tsen54	99	39.723	Cynoglossus_semilaevis
ENSFALG00000001119	TSEN54	80	46.244	ENSDARG00000036844	tsen54	99	47.541	Danio_rerio
ENSFALG00000001119	TSEN54	98	50.763	ENSDNOG00000018452	TSEN54	94	50.988	Dasypus_novemcinctus
ENSFALG00000001119	TSEN54	99	50.760	ENSDORG00000004073	Tsen54	98	51.167	Dipodomys_ordii
ENSFALG00000001119	TSEN54	92	33.789	ENSEBUG00000005203	TSEN54	91	33.789	Eptatretus_burgeri
ENSFALG00000001119	TSEN54	96	52.335	ENSEASG00005000579	TSEN54	97	52.335	Equus_asinus_asinus
ENSFALG00000001119	TSEN54	96	51.946	ENSECAG00000004924	TSEN54	97	51.946	Equus_caballus
ENSFALG00000001119	TSEN54	86	47.312	ENSEEUG00000008467	TSEN54	99	47.957	Erinaceus_europaeus
ENSFALG00000001119	TSEN54	92	45.110	ENSELUG00000017703	tsen54	86	44.711	Esox_lucius
ENSFALG00000001119	TSEN54	99	51.128	ENSFCAG00000023712	TSEN54	97	52.224	Felis_catus
ENSFALG00000001119	TSEN54	86	51.542	ENSFDAG00000019090	TSEN54	99	51.542	Fukomys_damarensis
ENSFALG00000001119	TSEN54	92	47.239	ENSFHEG00000005470	tsen54	93	46.626	Fundulus_heteroclitus
ENSFALG00000001119	TSEN54	75	44.578	ENSGMOG00000013146	tsen54	88	46.309	Gadus_morhua
ENSFALG00000001119	TSEN54	97	74.031	ENSGALG00000047163	TSEN54	96	75.862	Gallus_gallus
ENSFALG00000001119	TSEN54	92	47.239	ENSGAFG00000005111	tsen54	93	46.545	Gambusia_affinis
ENSFALG00000001119	TSEN54	92	44.196	ENSGACG00000014987	tsen54	96	44.399	Gasterosteus_aculeatus
ENSFALG00000001119	TSEN54	98	68.061	ENSGAGG00000006825	TSEN54	97	68.654	Gopherus_agassizii
ENSFALG00000001119	TSEN54	96	51.859	ENSGGOG00000009417	TSEN54	97	53.320	Gorilla_gorilla
ENSFALG00000001119	TSEN54	83	45.578	ENSHBUG00000018296	tsen54	85	45.045	Haplochromis_burtoni
ENSFALG00000001119	TSEN54	99	50.758	ENSHGLG00000007979	TSEN54	94	52.419	Heterocephalus_glaber_female
ENSFALG00000001119	TSEN54	99	50.000	ENSHGLG00100005497	TSEN54	94	51.613	Heterocephalus_glaber_male
ENSFALG00000001119	TSEN54	80	44.773	ENSHCOG00000007481	tsen54	99	43.021	Hippocampus_comes
ENSFALG00000001119	TSEN54	92	43.992	ENSIPUG00000000590	tsen54	92	44.807	Ictalurus_punctatus
ENSFALG00000001119	TSEN54	98	50.284	ENSSTOG00000012883	TSEN54	98	49.808	Ictidomys_tridecemlineatus
ENSFALG00000001119	TSEN54	97	53.551	ENSJJAG00000007365	Tsen54	94	54.600	Jaculus_jaculus
ENSFALG00000001119	TSEN54	92	46.245	ENSKMAG00000006944	tsen54	93	45.347	Kryptolebias_marmoratus
ENSFALG00000001119	TSEN54	92	44.490	ENSLBEG00000004199	tsen54	93	44.376	Labrus_bergylta
ENSFALG00000001119	TSEN54	95	45.631	ENSLACG00000009497	TSEN54	99	45.631	Latimeria_chalumnae
ENSFALG00000001119	TSEN54	93	46.955	ENSLOCG00000011191	tsen54	93	47.732	Lepisosteus_oculatus
ENSFALG00000001119	TSEN54	92	50.509	ENSLAFG00000011655	TSEN54	92	50.509	Loxodonta_africana
ENSFALG00000001119	TSEN54	99	51.141	ENSMFAG00000000712	TSEN54	94	53.320	Macaca_fascicularis
ENSFALG00000001119	TSEN54	99	50.951	ENSMNEG00000029199	TSEN54	94	53.119	Macaca_nemestrina
ENSFALG00000001119	TSEN54	86	51.322	ENSMLEG00000044168	TSEN54	88	51.868	Mandrillus_leucophaeus
ENSFALG00000001119	TSEN54	92	45.791	ENSMAMG00000019773	tsen54	93	47.035	Mastacembelus_armatus
ENSFALG00000001119	TSEN54	92	45.825	ENSMZEG00005000884	tsen54	93	45.639	Maylandia_zebra
ENSFALG00000001119	TSEN54	97	74.231	ENSMGAG00000009556	TSEN54	98	74.231	Meleagris_gallopavo
ENSFALG00000001119	TSEN54	97	51.923	ENSMAUG00000016838	Tsen54	94	52.811	Mesocricetus_auratus
ENSFALG00000001119	TSEN54	99	52.642	ENSMICG00000044012	TSEN54	94	53.831	Microcebus_murinus
ENSFALG00000001119	TSEN54	97	51.931	ENSMOCG00000021585	Tsen54	94	52.823	Microtus_ochrogaster
ENSFALG00000001119	TSEN54	92	43.585	ENSMMOG00000020189	tsen54	82	64.964	Mola_mola
ENSFALG00000001119	TSEN54	95	52.115	ENSMODG00000007438	TSEN54	94	51.154	Monodelphis_domestica
ENSFALG00000001119	TSEN54	92	45.639	ENSMALG00000020573	tsen54	93	45.600	Monopterus_albus
ENSFALG00000001119	TSEN54	99	50.857	MGP_CAROLIEiJ_G0017417	Tsen54	95	51.984	Mus_caroli
ENSFALG00000001119	TSEN54	98	50.752	ENSMUSG00000020781	Tsen54	95	51.277	Mus_musculus
ENSFALG00000001119	TSEN54	98	51.032	MGP_PahariEiJ_G0018547	Tsen54	94	52.705	Mus_pahari
ENSFALG00000001119	TSEN54	98	51.145	MGP_SPRETEiJ_G0018262	Tsen54	95	52.381	Mus_spretus
ENSFALG00000001119	TSEN54	95	51.076	ENSMPUG00000013870	TSEN54	95	51.076	Mustela_putorius_furo
ENSFALG00000001119	TSEN54	92	51.731	ENSMLUG00000015298	TSEN54	93	51.731	Myotis_lucifugus
ENSFALG00000001119	TSEN54	99	51.698	ENSNGAG00000015673	Tsen54	97	51.931	Nannospalax_galili
ENSFALG00000001119	TSEN54	88	49.041	ENSMEUG00000011908	TSEN54	100	49.041	Notamacropus_eugenii
ENSFALG00000001119	TSEN54	94	50.101	ENSOPRG00000012513	TSEN54	93	50.000	Ochotona_princeps
ENSFALG00000001119	TSEN54	92	46.045	ENSONIG00000009543	tsen54	93	45.528	Oreochromis_niloticus
ENSFALG00000001119	TSEN54	99	49.630	ENSOCUG00000009875	TSEN54	94	50.791	Oryctolagus_cuniculus
ENSFALG00000001119	TSEN54	93	44.559	ENSORLG00000000852	tsen54	93	44.559	Oryzias_latipes
ENSFALG00000001119	TSEN54	93	44.378	ENSORLG00020018221	tsen54	95	43.778	Oryzias_latipes_hni
ENSFALG00000001119	TSEN54	93	43.976	ENSORLG00015009413	tsen54	94	45.082	Oryzias_latipes_hsok
ENSFALG00000001119	TSEN54	93	45.935	ENSOMEG00000014402	tsen54	90	46.217	Oryzias_melastigma
ENSFALG00000001119	TSEN54	99	49.811	ENSOGAG00000001442	TSEN54	94	49.597	Otolemur_garnettii
ENSFALG00000001119	TSEN54	85	49.890	ENSOARG00000010361	TSEN54	99	50.110	Ovis_aries
ENSFALG00000001119	TSEN54	94	53.333	ENSPPAG00000043519	TSEN54	99	53.226	Pan_paniscus
ENSFALG00000001119	TSEN54	99	51.128	ENSPPRG00000009162	TSEN54	97	52.224	Panthera_pardus
ENSFALG00000001119	TSEN54	86	51.982	ENSPTIG00000019312	TSEN54	96	51.982	Panthera_tigris_altaica
ENSFALG00000001119	TSEN54	99	51.515	ENSPTRG00000009646	TSEN54	94	53.320	Pan_troglodytes
ENSFALG00000001119	TSEN54	99	50.951	ENSPANG00000020133	TSEN54	93	53.119	Papio_anubis
ENSFALG00000001119	TSEN54	93	43.810	ENSPKIG00000023018	tsen54	100	44.368	Paramormyrops_kingsleyae
ENSFALG00000001119	TSEN54	80	66.276	ENSPSIG00000012807	TSEN54	99	66.276	Pelodiscus_sinensis
ENSFALG00000001119	TSEN54	92	35.569	ENSPMGG00000019578	tsen54	80	53.846	Periophthalmus_magnuspinnatus
ENSFALG00000001119	TSEN54	97	52.381	ENSPEMG00000014857	Tsen54	98	51.931	Peromyscus_maniculatus_bairdii
ENSFALG00000001119	TSEN54	92	48.374	ENSPFOG00000022740	tsen54	93	48.984	Poecilia_formosa
ENSFALG00000001119	TSEN54	92	48.466	ENSPLAG00000014847	tsen54	93	49.080	Poecilia_latipinna
ENSFALG00000001119	TSEN54	92	48.057	ENSPMEG00000022876	tsen54	93	48.671	Poecilia_mexicana
ENSFALG00000001119	TSEN54	92	47.444	ENSPREG00000013090	tsen54	93	48.057	Poecilia_reticulata
ENSFALG00000001119	TSEN54	91	50.939	ENSPPYG00000008629	TSEN54	100	50.520	Pongo_abelii
ENSFALG00000001119	TSEN54	89	45.684	ENSPCAG00000002093	TSEN54	93	45.684	Procavia_capensis
ENSFALG00000001119	TSEN54	94	53.320	ENSPCOG00000027880	TSEN54	94	53.320	Propithecus_coquereli
ENSFALG00000001119	TSEN54	96	52.124	ENSPVAG00000008446	TSEN54	97	50.874	Pteropus_vampyrus
ENSFALG00000001119	TSEN54	92	46.185	ENSPNYG00000010217	tsen54	99	46.800	Pundamilia_nyererei
ENSFALG00000001119	TSEN54	92	47.347	ENSPNAG00000003770	tsen54	93	47.233	Pygocentrus_nattereri
ENSFALG00000001119	TSEN54	97	52.418	ENSRNOG00000004598	Tsen54	94	53.333	Rattus_norvegicus
ENSFALG00000001119	TSEN54	99	50.760	ENSRBIG00000043040	TSEN54	94	52.716	Rhinopithecus_bieti
ENSFALG00000001119	TSEN54	98	51.141	ENSRROG00000030797	TSEN54	94	52.716	Rhinopithecus_roxellana
ENSFALG00000001119	TSEN54	99	47.646	ENSSBOG00000013543	TSEN54	93	50.101	Saimiri_boliviensis_boliviensis
ENSFALG00000001119	TSEN54	94	50.992	ENSSHAG00000018127	TSEN54	93	51.089	Sarcophilus_harrisii
ENSFALG00000001119	TSEN54	81	46.296	ENSSFOG00015004093	tsen54	100	45.602	Scleropages_formosus
ENSFALG00000001119	TSEN54	93	46.232	ENSSMAG00000012449	tsen54	99	43.764	Scophthalmus_maximus
ENSFALG00000001119	TSEN54	92	47.284	ENSSDUG00000021506	tsen54	93	47.082	Seriola_dumerili
ENSFALG00000001119	TSEN54	92	47.071	ENSSLDG00000016303	tsen54	93	46.869	Seriola_lalandi_dorsalis
ENSFALG00000001119	TSEN54	77	56.901	ENSSPUG00000008988	TSEN54	97	56.075	Sphenodon_punctatus
ENSFALG00000001119	TSEN54	92	47.454	ENSSPAG00000008098	-	99	47.454	Stegastes_partitus
ENSFALG00000001119	TSEN54	80	44.731	ENSSPAG00000008047	tsen54	99	44.731	Stegastes_partitus
ENSFALG00000001119	TSEN54	94	53.000	ENSSSCG00000036852	TSEN54	96	51.965	Sus_scrofa
ENSFALG00000001119	TSEN54	86	93.778	ENSTGUG00000008548	TSEN54	99	93.778	Taeniopygia_guttata
ENSFALG00000001119	TSEN54	92	46.091	ENSTRUG00000004230	tsen54	92	45.885	Takifugu_rubripes
ENSFALG00000001119	TSEN54	92	43.089	ENSTNIG00000011281	tsen54	94	45.000	Tetraodon_nigroviridis
ENSFALG00000001119	TSEN54	86	49.237	ENSTTRG00000015828	TSEN54	99	49.675	Tursiops_truncatus
ENSFALG00000001119	TSEN54	81	49.885	ENSUAMG00000010045	TSEN54	100	49.078	Ursus_americanus
ENSFALG00000001119	TSEN54	83	50.334	ENSUMAG00000008979	TSEN54	100	49.443	Ursus_maritimus
ENSFALG00000001119	TSEN54	98	52.008	ENSVVUG00000011411	TSEN54	98	52.703	Vulpes_vulpes
ENSFALG00000001119	TSEN54	94	49.197	ENSXETG00000012532	tsen54	93	64.151	Xenopus_tropicalis
ENSFALG00000001119	TSEN54	92	42.387	ENSXCOG00000018245	tsen54	99	43.981	Xiphophorus_couchianus
ENSFALG00000001119	TSEN54	92	47.737	ENSXMAG00000018818	tsen54	93	48.354	Xiphophorus_maculatus