EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFALG00000001136 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Minus strand
Length
35965 bases
Position
chrJH603567.1:18391-54355
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000001190RRM_1PF00076.223.9e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000001196PUF60-2013300-ENSFALP00000001190527 (aa)-U3JEI6
Gene Model
Click here to download ENSFALG00000001136's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001136's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000001136PUF609986.667ENSG00000179950PUF6010085.465Homo_sapiens
ENSFALG00000001136PUF609877.040ENSAPOG00000001713puf60b9976.660Acanthochromis_polyacanthus
ENSFALG00000001136PUF609884.866ENSAMEG00000006406PUF609383.716Ailuropoda_melanoleuca
ENSFALG00000001136PUF609776.775ENSACIG00000021705puf60b10076.392Amphilophus_citrinellus
ENSFALG00000001136PUF609767.625ENSACIG00000003263-9968.138Amphilophus_citrinellus
ENSFALG00000001136PUF609877.040ENSAOCG00000005395puf60b10077.351Amphiprion_ocellaris
ENSFALG00000001136PUF609872.433ENSAOCG00000015558-9972.624Amphiprion_ocellaris
ENSFALG00000001136PUF609763.916ENSAPEG00000001836-9965.019Amphiprion_percula
ENSFALG00000001136PUF609871.537ENSAPEG00000011923puf60b9971.157Amphiprion_percula
ENSFALG00000001136PUF609872.952ENSATEG00000006303-9973.194Anabas_testudineus
ENSFALG00000001136PUF609877.040ENSATEG00000001730puf60b9976.660Anabas_testudineus
ENSFALG00000001136PUF609887.572ENSAPLG00000010150PUF6010086.398Anas_platyrhynchos
ENSFALG00000001136PUF609985.958ENSACAG00000001645PUF609784.791Anolis_carolinensis
ENSFALG00000001136PUF609987.048ENSANAG00000018626PUF6010085.853Aotus_nancymaae
ENSFALG00000001136PUF609776.775ENSACLG00000004462puf60b10076.392Astatotilapia_calliptera
ENSFALG00000001136PUF609768.224ENSAMXG00000041030puf60b10065.543Astyanax_mexicanus
ENSFALG00000001136PUF609874.254ENSAMXG00000036570puf60a10072.364Astyanax_mexicanus
ENSFALG00000001136PUF609986.857ENSBTAG00000037493PUF6010085.333Bos_taurus
ENSFALG00000001136PUF608047.200WBGene00004389rnp-68642.308Caenorhabditis_elegans
ENSFALG00000001136PUF609986.857ENSCJAG00000021485PUF609985.687Callithrix_jacchus
ENSFALG00000001136PUF609886.590ENSCAFG00000001400PUF609385.441Canis_familiaris
ENSFALG00000001136PUF609987.048ENSCAFG00020018754PUF609985.878Canis_lupus_dingo
ENSFALG00000001136PUF609886.782ENSCHIG00000001618PUF608785.632Capra_hircus
ENSFALG00000001136PUF609987.238ENSTSYG00000011912PUF6010085.853Carlito_syrichta
ENSFALG00000001136PUF609881.559ENSCPOG00000014613PUF609480.418Cavia_porcellus
ENSFALG00000001136PUF609986.667ENSCCAG00000007744PUF609985.496Cebus_capucinus
ENSFALG00000001136PUF609986.667ENSCATG00000035405PUF609985.496Cercocebus_atys
ENSFALG00000001136PUF609887.165ENSCLAG00000009154PUF609386.015Chinchilla_lanigera
ENSFALG00000001136PUF609786.628ENSCSAG00000008878PUF6010085.465Chlorocebus_sabaeus
ENSFALG00000001136PUF609886.948ENSCPBG00000005595PUF609885.851Chrysemys_picta_bellii
ENSFALG00000001136PUF606250.294ENSCING00000002156-8749.853Ciona_intestinalis
ENSFALG00000001136PUF609844.045ENSCING00000008436-9843.258Ciona_intestinalis
ENSFALG00000001136PUF609543.539ENSCSAVG00000004765-9743.849Ciona_savignyi
ENSFALG00000001136PUF609549.617ENSCSAVG00000001385-9652.881Ciona_savignyi
ENSFALG00000001136PUF607984.173ENSCANG00000041843PUF6010082.734Colobus_angolensis_palliatus
ENSFALG00000001136PUF609886.398ENSCGRG00001017442Puf609385.249Cricetulus_griseus_chok1gshd
ENSFALG00000001136PUF609886.398ENSCGRG00000003717Puf609385.249Cricetulus_griseus_crigri
ENSFALG00000001136PUF609963.277ENSCSEG00000014845-9165.226Cynoglossus_semilaevis
ENSFALG00000001136PUF609876.850ENSCSEG00000019887puf60b9376.091Cynoglossus_semilaevis
ENSFALG00000001136PUF609776.008ENSCVAG00000009386puf60b10076.583Cyprinodon_variegatus
ENSFALG00000001136PUF608970.105ENSCVAG00000001560-9869.831Cyprinodon_variegatus
ENSFALG00000001136PUF609776.136ENSDARG00000032175puf60a9993.168Danio_rerio
ENSFALG00000001136PUF609770.489ENSDARG00000001241puf60b9996.032Danio_rerio
ENSFALG00000001136PUF609677.381ENSDNOG00000043278PUF608395.833Dasypus_novemcinctus
ENSFALG00000001136PUF609886.973ENSDORG00000004585Puf609585.824Dipodomys_ordii
ENSFALG00000001136PUF608654.110FBgn0028577hfp9942.527Drosophila_melanogaster
ENSFALG00000001136PUF609854.622ENSEBUG00000014291puf60b8457.555Eptatretus_burgeri
ENSFALG00000001136PUF609563.221ENSEBUG00000005470-8862.227Eptatretus_burgeri
ENSFALG00000001136PUF609987.048ENSEASG00005009695PUF609985.878Equus_asinus_asinus
ENSFALG00000001136PUF6010086.116ENSECAG00000024681PUF609984.991Equus_caballus
ENSFALG00000001136PUF609876.938ENSELUG00000018443-9876.326Esox_lucius
ENSFALG00000001136PUF609874.573ENSELUG00000006507puf60b9971.795Esox_lucius
ENSFALG00000001136PUF609986.667ENSFCAG00000001045PUF6010085.465Felis_catus
ENSFALG00000001136PUF609887.165ENSFDAG00000017177PUF609386.015Fukomys_damarensis
ENSFALG00000001136PUF609876.281ENSFHEG00000020046puf60b10077.351Fundulus_heteroclitus
ENSFALG00000001136PUF609370.541ENSFHEG00000021687PUF6010070.961Fundulus_heteroclitus
ENSFALG00000001136PUF609863.415ENSGMOG00000006392puf60b10062.030Gadus_morhua
ENSFALG00000001136PUF606582.849ENSGALG00000039901PUF609481.977Gallus_gallus
ENSFALG00000001136PUF609771.429ENSGAFG00000004334-9970.270Gambusia_affinis
ENSFALG00000001136PUF609875.712ENSGAFG00000021040puf60b10076.583Gambusia_affinis
ENSFALG00000001136PUF609964.773ENSGACG00000004717puf60b9964.015Gasterosteus_aculeatus
ENSFALG00000001136PUF609763.178ENSGACG00000001484-10062.597Gasterosteus_aculeatus
ENSFALG00000001136PUF609886.923ENSGAGG00000013289PUF609285.851Gopherus_agassizii
ENSFALG00000001136PUF609986.667ENSGGOG00000004646PUF609985.496Gorilla_gorilla
ENSFALG00000001136PUF609876.281ENSHBUG00000015118puf60b10076.392Haplochromis_burtoni
ENSFALG00000001136PUF609872.486ENSHBUG00000009634-9971.537Haplochromis_burtoni
ENSFALG00000001136PUF609887.165ENSHGLG00000006111PUF609386.015Heterocephalus_glaber_female
ENSFALG00000001136PUF609887.165ENSHGLG00100012362PUF609386.015Heterocephalus_glaber_male
ENSFALG00000001136PUF609659.332ENSHCOG00000000378-9957.331Hippocampus_comes
ENSFALG00000001136PUF609874.033ENSHCOG00000015541puf60b10073.063Hippocampus_comes
ENSFALG00000001136PUF609770.280ENSIPUG00000004660puf60b9969.925Ictalurus_punctatus
ENSFALG00000001136PUF609773.346ENSIPUG00000002453puf60a9973.346Ictalurus_punctatus
ENSFALG00000001136PUF609887.165ENSSTOG00000025037PUF609486.015Ictidomys_tridecemlineatus
ENSFALG00000001136PUF609886.782ENSJJAG00000001076Puf609385.632Jaculus_jaculus
ENSFALG00000001136PUF609770.189ENSKMAG00000010106-10067.351Kryptolebias_marmoratus
ENSFALG00000001136PUF609776.775ENSKMAG00000016745puf60b10077.351Kryptolebias_marmoratus
ENSFALG00000001136PUF609984.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSFALG00000001136PUF606876.099ENSLACG00000005456PUF609974.380Latimeria_chalumnae
ENSFALG00000001136PUF609981.321ENSLOCG00000010106puf60b9980.381Lepisosteus_oculatus
ENSFALG00000001136PUF609885.632ENSLAFG00000022929PUF609484.483Loxodonta_africana
ENSFALG00000001136PUF609986.667ENSMFAG00000043373PUF609985.496Macaca_fascicularis
ENSFALG00000001136PUF609986.667ENSMMUG00000013558PUF609985.496Macaca_mulatta
ENSFALG00000001136PUF609986.667ENSMNEG00000031099PUF609985.496Macaca_nemestrina
ENSFALG00000001136PUF609786.628ENSMLEG00000040009PUF6010085.465Mandrillus_leucophaeus
ENSFALG00000001136PUF609873.814ENSMAMG00000019476-9972.865Mastacembelus_armatus
ENSFALG00000001136PUF609876.660ENSMAMG00000010394puf60b10074.766Mastacembelus_armatus
ENSFALG00000001136PUF609872.676ENSMZEG00005019425-9971.727Maylandia_zebra
ENSFALG00000001136PUF609776.775ENSMZEG00005018515puf60b10076.392Maylandia_zebra
ENSFALG00000001136PUF609887.572ENSMGAG00000013070PUF609886.398Meleagris_gallopavo
ENSFALG00000001136PUF609372.000ENSMAUG00000018549-9571.690Mesocricetus_auratus
ENSFALG00000001136PUF606983.333ENSMAUG00000014267-9082.514Mesocricetus_auratus
ENSFALG00000001136PUF609987.048ENSMICG00000012226PUF609985.878Microcebus_murinus
ENSFALG00000001136PUF609886.590ENSMOCG00000018780Puf609385.441Microtus_ochrogaster
ENSFALG00000001136PUF609777.543ENSMMOG00000004217puf60b10077.159Mola_mola
ENSFALG00000001136PUF609964.326ENSMMOG00000018059-9966.895Mola_mola
ENSFALG00000001136PUF609985.849ENSMODG00000009161PUF609684.717Monodelphis_domestica
ENSFALG00000001136PUF609872.538ENSMALG00000000200-9970.943Monopterus_albus
ENSFALG00000001136PUF609869.450ENSMALG00000006797puf60b9969.070Monopterus_albus
ENSFALG00000001136PUF609886.782MGP_CAROLIEiJ_G0019910Puf609385.632Mus_caroli
ENSFALG00000001136PUF609886.782ENSMUSG00000002524Puf609385.632Mus_musculus
ENSFALG00000001136PUF609886.782MGP_PahariEiJ_G0019920Puf609385.632Mus_pahari
ENSFALG00000001136PUF609886.782MGP_SPRETEiJ_G0020812Puf609385.632Mus_spretus
ENSFALG00000001136PUF609886.782ENSMPUG00000008137PUF609285.632Mustela_putorius_furo
ENSFALG00000001136PUF609980.571ENSMLUG00000013032-9979.389Myotis_lucifugus
ENSFALG00000001136PUF609886.207ENSMLUG00000000238-9385.057Myotis_lucifugus
ENSFALG00000001136PUF609886.782ENSNGAG00000000712Puf6010085.659Nannospalax_galili
ENSFALG00000001136PUF608271.840ENSNBRG00000013047puf60b9772.941Neolamprologus_brichardi
ENSFALG00000001136PUF609872.814ENSNBRG00000017223-9972.433Neolamprologus_brichardi
ENSFALG00000001136PUF609986.476ENSNLEG00000002156PUF609985.305Nomascus_leucogenys
ENSFALG00000001136PUF607086.022ENSOPRG00000002147PUF607286.022Ochotona_princeps
ENSFALG00000001136PUF609563.690ENSODEG00000015513-9662.378Octodon_degus
ENSFALG00000001136PUF6071100.000ENSODEG00000014024-90100.000Octodon_degus
ENSFALG00000001136PUF609976.038ENSONIG00000006247puf60b9975.660Oreochromis_niloticus
ENSFALG00000001136PUF609872.348ENSONIG00000014030-9871.917Oreochromis_niloticus
ENSFALG00000001136PUF606990.964ENSOANG00000006962PUF608591.566Ornithorhynchus_anatinus
ENSFALG00000001136PUF609770.510ENSORLG00000028655-9970.152Oryzias_latipes
ENSFALG00000001136PUF609877.230ENSORLG00000012279puf60b10076.392Oryzias_latipes
ENSFALG00000001136PUF609877.230ENSORLG00020007333puf6010076.392Oryzias_latipes_hni
ENSFALG00000001136PUF609870.433ENSORLG00020018144-9870.076Oryzias_latipes_hni
ENSFALG00000001136PUF609771.048ENSORLG00015016833-9770.690Oryzias_latipes_hsok
ENSFALG00000001136PUF609876.560ENSORLG00015007718puf60b10076.291Oryzias_latipes_hsok
ENSFALG00000001136PUF609871.023ENSOMEG00000022185-9870.778Oryzias_melastigma
ENSFALG00000001136PUF609875.279ENSOMEG00000001643puf60b9974.907Oryzias_melastigma
ENSFALG00000001136PUF609887.165ENSOGAG00000006259PUF609386.015Otolemur_garnettii
ENSFALG00000001136PUF609884.100ENSOARG00000016235PUF609882.950Ovis_aries
ENSFALG00000001136PUF609986.667ENSPPAG00000029933PUF609985.496Pan_paniscus
ENSFALG00000001136PUF609986.667ENSPPRG00000003257PUF6010085.465Panthera_pardus
ENSFALG00000001136PUF609884.321ENSPTIG00000009795PUF609983.142Panthera_tigris_altaica
ENSFALG00000001136PUF609986.476ENSPTRG00000020670PUF609985.305Pan_troglodytes
ENSFALG00000001136PUF609986.286ENSPTRG00000043963-9985.115Pan_troglodytes
ENSFALG00000001136PUF6010085.714ENSPANG00000021936PUF609985.496Papio_anubis
ENSFALG00000001136PUF609978.261ENSPKIG00000012204puf60b10078.654Paramormyrops_kingsleyae
ENSFALG00000001136PUF609877.170ENSPKIG00000004295puf60a9977.820Paramormyrops_kingsleyae
ENSFALG00000001136PUF609886.998ENSPSIG00000004679PUF609985.824Pelodiscus_sinensis
ENSFALG00000001136PUF609775.954ENSPMGG00000013444puf60b9975.573Periophthalmus_magnuspinnatus
ENSFALG00000001136PUF609886.590ENSPEMG00000008820Puf609385.441Peromyscus_maniculatus_bairdii
ENSFALG00000001136PUF609986.832ENSPCIG00000020270PUF609985.660Phascolarctos_cinereus
ENSFALG00000001136PUF609772.587ENSPFOG00000011118-9772.394Poecilia_formosa
ENSFALG00000001136PUF609876.281ENSPFOG00000019217puf60b9973.624Poecilia_formosa
ENSFALG00000001136PUF609772.780ENSPLAG00000017025-9072.008Poecilia_latipinna
ENSFALG00000001136PUF609776.775ENSPLAG00000010754puf60b10077.351Poecilia_latipinna
ENSFALG00000001136PUF609876.281ENSPMEG00000000838puf60b10077.351Poecilia_mexicana
ENSFALG00000001136PUF609772.780ENSPMEG00000009767-9072.587Poecilia_mexicana
ENSFALG00000001136PUF609873.752ENSPREG00000005440puf60b9974.861Poecilia_reticulata
ENSFALG00000001136PUF607982.494ENSPPYG00000018951-9581.055Pongo_abelii
ENSFALG00000001136PUF607984.450ENSPCAG00000014837PUF6010082.974Procavia_capensis
ENSFALG00000001136PUF609986.857ENSPCOG00000027981PUF609985.687Propithecus_coquereli
ENSFALG00000001136PUF6080100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSFALG00000001136PUF609872.676ENSPNYG00000004273-9971.727Pundamilia_nyererei
ENSFALG00000001136PUF609776.775ENSPNYG00000002556puf60b10076.392Pundamilia_nyererei
ENSFALG00000001136PUF609972.128ENSPNAG00000019909puf60a10072.693Pygocentrus_nattereri
ENSFALG00000001136PUF609967.730ENSPNAG00000019415puf60b9165.666Pygocentrus_nattereri
ENSFALG00000001136PUF609886.782ENSRNOG00000009960Puf609385.632Rattus_norvegicus
ENSFALG00000001136PUF609986.667ENSRBIG00000035274PUF609985.496Rhinopithecus_bieti
ENSFALG00000001136PUF609986.667ENSRROG00000029360PUF609985.496Rhinopithecus_roxellana
ENSFALG00000001136PUF609985.524ENSSBOG00000027089PUF609983.397Saimiri_boliviensis_boliviensis
ENSFALG00000001136PUF609084.519ENSSHAG00000006668PUF609283.264Sarcophilus_harrisii
ENSFALG00000001136PUF609773.194ENSSFOG00015019619puf60b9975.560Scleropages_formosus
ENSFALG00000001136PUF609872.875ENSSFOG00015019371puf60a9877.264Scleropages_formosus
ENSFALG00000001136PUF607288.889ENSSMAG00000016381puf60b7388.889Scophthalmus_maximus
ENSFALG00000001136PUF609975.325ENSSDUG00000009935puf60b10074.954Seriola_dumerili
ENSFALG00000001136PUF609871.565ENSSDUG00000007048-9871.374Seriola_dumerili
ENSFALG00000001136PUF609771.863ENSSLDG00000007366-9971.727Seriola_lalandi_dorsalis
ENSFALG00000001136PUF609877.290ENSSLDG00000024011puf60b10075.140Seriola_lalandi_dorsalis
ENSFALG00000001136PUF606669.143ENSSPUG00000013518PUF609567.429Sphenodon_punctatus
ENSFALG00000001136PUF609774.237ENSSPAG00000020285-10073.855Stegastes_partitus
ENSFALG00000001136PUF609874.492ENSSPAG00000012144puf60b10075.327Stegastes_partitus
ENSFALG00000001136PUF609886.398ENSSSCG00000038800PUF609982.061Sus_scrofa
ENSFALG00000001136PUF609883.748ENSTGUG00000012797-10082.567Taeniopygia_guttata
ENSFALG00000001136PUF609768.992ENSTRUG00000008843-10068.605Takifugu_rubripes
ENSFALG00000001136PUF609876.281ENSTRUG00000005420puf60b10074.393Takifugu_rubripes
ENSFALG00000001136PUF609876.281ENSTNIG00000013675puf60b9975.901Tetraodon_nigroviridis
ENSFALG00000001136PUF609869.407ENSTNIG00000003069-9969.732Tetraodon_nigroviridis
ENSFALG00000001136PUF606077.441ENSTBEG00000002751-9976.351Tupaia_belangeri
ENSFALG00000001136PUF607567.536ENSTBEG00000001899-10068.314Tupaia_belangeri
ENSFALG00000001136PUF609785.687ENSTTRG00000017088PUF6010084.109Tursiops_truncatus
ENSFALG00000001136PUF609987.048ENSUAMG00000024917PUF609985.878Ursus_americanus
ENSFALG00000001136PUF609881.801ENSUMAG00000000272PUF609380.460Ursus_maritimus
ENSFALG00000001136PUF609886.973ENSVVUG00000022527PUF6010085.853Vulpes_vulpes
ENSFALG00000001136PUF609983.588ENSXETG00000012469puf609982.409Xenopus_tropicalis
ENSFALG00000001136PUF609774.088ENSXCOG00000012355puf60b10074.088Xiphophorus_couchianus
ENSFALG00000001136PUF609969.260ENSXMAG00000010507-9968.501Xiphophorus_maculatus
ENSFALG00000001136PUF609876.281ENSXMAG00000001862puf60b10077.351Xiphophorus_maculatus

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