EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein SMG5-like
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 12499 bases
Position: chrJH603479.1:370-12868
Accession: 101808181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001214	EST1	PF10374.9	5.6e-25	1	1
ENSFALP00000001216	EST1	PF10374.9	2.8e-24	1	1
ENSFALP00000001214	EST1_DNA_bind	PF10373.9	5.7e-35	1	1
ENSFALP00000001216	EST1_DNA_bind	PF10373.9	1.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001220	-	2318	-	ENSFALP00000001214	585 (aa)	XP_016159488	U3JEL0
ENSFALT00000001222	-	2017	-	ENSFALP00000001216	601 (aa)	-	U3JEL2

Gene Model

Click here to download ENSFALG00000001166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001166	-	99	82.077	ENSG00000198952	SMG5	58	81.970	Homo_sapiens
ENSFALG00000001166	-	96	68.729	ENSAPOG00000019690	smg5	57	69.125	Acanthochromis_polyacanthus
ENSFALG00000001166	-	99	79.933	ENSAMEG00000014458	SMG5	60	79.833	Ailuropoda_melanoleuca
ENSFALG00000001166	-	95	67.559	ENSACIG00000001353	smg5	57	68.781	Amphilophus_citrinellus
ENSFALG00000001166	-	96	68.243	ENSAOCG00000019483	smg5	56	68.919	Amphiprion_ocellaris
ENSFALG00000001166	-	95	68.889	ENSAPEG00000022949	smg5	57	69.573	Amphiprion_percula
ENSFALG00000001166	-	96	67.672	ENSATEG00000005348	smg5	57	69.012	Anabas_testudineus
ENSFALG00000001166	-	100	95.392	ENSAPLG00000010263	SMG5	57	95.392	Anas_platyrhynchos
ENSFALG00000001166	-	66	90.365	ENSACAG00000015999	-	100	90.365	Anolis_carolinensis
ENSFALG00000001166	-	99	81.910	ENSANAG00000032899	SMG5	59	81.773	Aotus_nancymaae
ENSFALG00000001166	-	96	66.889	ENSACLG00000009311	smg5	58	68.874	Astatotilapia_calliptera
ENSFALG00000001166	-	98	59.776	ENSAMXG00000024616	smg5	60	63.609	Astyanax_mexicanus
ENSFALG00000001166	-	99	82.580	ENSBTAG00000009435	SMG5	59	82.471	Bos_taurus
ENSFALG00000001166	-	97	44.912	ENSBTAG00000021747	-	57	44.670	Bos_taurus
ENSFALG00000001166	-	99	82.077	ENSCJAG00000005684	SMG5	60	81.970	Callithrix_jacchus
ENSFALG00000001166	-	99	81.072	ENSCAFG00000016839	SMG5	58	81.302	Canis_familiaris
ENSFALG00000001166	-	99	81.072	ENSCAFG00020006061	SMG5	58	81.302	Canis_lupus_dingo
ENSFALG00000001166	-	99	82.580	ENSCHIG00000007709	SMG5	58	82.471	Capra_hircus
ENSFALG00000001166	-	97	45.391	ENSCHIG00000006323	-	58	44.171	Capra_hircus
ENSFALG00000001166	-	99	82.107	ENSTSYG00000004099	SMG5	58	82.167	Carlito_syrichta
ENSFALG00000001166	-	99	50.085	ENSCAPG00000003631	SMG5	55	53.819	Cavia_aperea
ENSFALG00000001166	-	99	79.299	ENSCPOG00000015696	SMG5	58	80.366	Cavia_porcellus
ENSFALG00000001166	-	99	82.077	ENSCCAG00000027409	SMG5	59	81.940	Cebus_capucinus
ENSFALG00000001166	-	99	82.245	ENSCATG00000030539	SMG5	58	82.137	Cercocebus_atys
ENSFALG00000001166	-	99	80.134	ENSCLAG00000003983	SMG5	58	81.198	Chinchilla_lanigera
ENSFALG00000001166	-	99	82.245	ENSCSAG00000002120	SMG5	58	82.137	Chlorocebus_sabaeus
ENSFALG00000001166	-	100	89.643	ENSCPBG00000025848	SMG5	60	89.643	Chrysemys_picta_bellii
ENSFALG00000001166	-	95	34.602	ENSCING00000008706	-	57	34.896	Ciona_intestinalis
ENSFALG00000001166	-	99	81.742	ENSCANG00000029208	SMG5	60	81.636	Colobus_angolensis_palliatus
ENSFALG00000001166	-	79	51.120	ENSCGRG00001000584	-	93	48.175	Cricetulus_griseus_chok1gshd
ENSFALG00000001166	-	99	80.399	ENSCGRG00001006336	Smg5	58	81.063	Cricetulus_griseus_chok1gshd
ENSFALG00000001166	-	66	55.970	ENSCGRG00000009566	-	86	55.970	Cricetulus_griseus_crigri
ENSFALG00000001166	-	99	80.399	ENSCGRG00000005111	Smg5	59	81.063	Cricetulus_griseus_crigri
ENSFALG00000001166	-	96	66.610	ENSCSEG00000014220	smg5	57	68.814	Cynoglossus_semilaevis
ENSFALG00000001166	-	96	59.184	ENSCVAG00000000529	smg5	54	60.169	Cyprinodon_variegatus
ENSFALG00000001166	-	66	81.203	ENSDARG00000041481	smg5	59	65.231	Danio_rerio
ENSFALG00000001166	-	99	76.214	ENSDNOG00000000051	SMG5	58	76.127	Dasypus_novemcinctus
ENSFALG00000001166	-	96	34.615	ENSDNOG00000039862	-	57	35.439	Dasypus_novemcinctus
ENSFALG00000001166	-	99	81.803	ENSDORG00000010382	Smg5	58	81.697	Dipodomys_ordii
ENSFALG00000001166	-	99	79.801	ENSETEG00000010336	SMG5	64	79.801	Echinops_telfairi
ENSFALG00000001166	-	84	50.787	ENSEBUG00000003739	smg5	55	48.864	Eptatretus_burgeri
ENSFALG00000001166	-	99	82.580	ENSEASG00005019122	SMG5	58	82.471	Equus_asinus_asinus
ENSFALG00000001166	-	99	82.412	ENSECAG00000001389	SMG5	58	82.304	Equus_caballus
ENSFALG00000001166	-	95	69.440	ENSELUG00000012585	smg5	56	70.628	Esox_lucius
ENSFALG00000001166	-	99	80.667	ENSFCAG00000011783	SMG5	58	80.667	Felis_catus
ENSFALG00000001166	-	99	80.100	ENSFDAG00000017388	SMG5	60	80.167	Fukomys_damarensis
ENSFALG00000001166	-	95	66.434	ENSFHEG00000013939	smg5	59	70.090	Fundulus_heteroclitus
ENSFALG00000001166	-	95	61.859	ENSGMOG00000007310	smg5	61	61.905	Gadus_morhua
ENSFALG00000001166	-	75	86.848	ENSGALG00000049544	-	90	86.848	Gallus_gallus
ENSFALG00000001166	-	100	90.785	ENSGALG00000029918	-	60	87.937	Gallus_gallus
ENSFALG00000001166	-	98	58.860	ENSGAFG00000021691	smg5	65	62.592	Gambusia_affinis
ENSFALG00000001166	-	96	62.866	ENSGACG00000013142	smg5	58	63.945	Gasterosteus_aculeatus
ENSFALG00000001166	-	100	89.643	ENSGAGG00000016131	SMG5	60	86.572	Gopherus_agassizii
ENSFALG00000001166	-	99	82.077	ENSGGOG00000010932	SMG5	58	81.970	Gorilla_gorilla
ENSFALG00000001166	-	95	66.722	ENSHBUG00000008654	smg5	57	68.719	Haplochromis_burtoni
ENSFALG00000001166	-	99	78.904	ENSHGLG00000019152	SMG5	58	79.139	Heterocephalus_glaber_female
ENSFALG00000001166	-	99	78.738	ENSHGLG00100015948	SMG5	65	78.974	Heterocephalus_glaber_male
ENSFALG00000001166	-	79	75.689	ENSHCOG00000010229	smg5	52	75.439	Hippocampus_comes
ENSFALG00000001166	-	98	61.940	ENSIPUG00000006624	Smg5	60	64.750	Ictalurus_punctatus
ENSFALG00000001166	-	99	81.742	ENSSTOG00000001780	SMG5	58	81.636	Ictidomys_tridecemlineatus
ENSFALG00000001166	-	99	80.500	ENSJJAG00000022763	Smg5	58	80.500	Jaculus_jaculus
ENSFALG00000001166	-	66	79.104	ENSKMAG00000014586	smg5	59	63.976	Kryptolebias_marmoratus
ENSFALG00000001166	-	99	66.181	ENSLBEG00000002145	smg5	60	66.828	Labrus_bergylta
ENSFALG00000001166	-	100	72.927	ENSLACG00000010521	SMG5	59	70.550	Latimeria_chalumnae
ENSFALG00000001166	-	88	80.250	ENSLOCG00000008380	smg5	70	64.643	Lepisosteus_oculatus
ENSFALG00000001166	-	99	81.879	ENSLAFG00000006241	SMG5	58	81.773	Loxodonta_africana
ENSFALG00000001166	-	99	82.245	ENSMFAG00000045357	SMG5	58	82.137	Macaca_fascicularis
ENSFALG00000001166	-	99	82.245	ENSMMUG00000000090	SMG5	58	82.137	Macaca_mulatta
ENSFALG00000001166	-	99	82.245	ENSMNEG00000044425	SMG5	58	82.137	Macaca_nemestrina
ENSFALG00000001166	-	99	75.042	ENSMLEG00000041192	SMG5	57	74.958	Mandrillus_leucophaeus
ENSFALG00000001166	-	96	62.219	ENSMAMG00000010683	smg5	59	64.618	Mastacembelus_armatus
ENSFALG00000001166	-	96	66.831	ENSMZEG00005015815	smg5	59	67.652	Maylandia_zebra
ENSFALG00000001166	-	99	79.667	ENSMAUG00000010381	Smg5	58	80.333	Mesocricetus_auratus
ENSFALG00000001166	-	93	44.834	ENSMAUG00000000043	-	96	44.834	Mesocricetus_auratus
ENSFALG00000001166	-	99	82.383	ENSMICG00000002257	SMG5	58	82.274	Microcebus_murinus
ENSFALG00000001166	-	99	80.165	ENSMOCG00000016590	Smg5	59	79.636	Microtus_ochrogaster
ENSFALG00000001166	-	81	49.592	ENSMOCG00000008423	-	84	50.305	Microtus_ochrogaster
ENSFALG00000001166	-	96	58.974	ENSMMOG00000017199	smg5	59	59.879	Mola_mola
ENSFALG00000001166	-	99	83.306	ENSMODG00000016901	SMG5	65	83.306	Monodelphis_domestica
ENSFALG00000001166	-	82	32.341	ENSMODG00000010675	-	55	32.937	Monodelphis_domestica
ENSFALG00000001166	-	63	36.504	ENSMODG00000021488	-	93	36.504	Monodelphis_domestica
ENSFALG00000001166	-	96	61.261	ENSMALG00000010375	smg5	59	61.862	Monopterus_albus
ENSFALG00000001166	-	99	80.467	MGP_CAROLIEiJ_G0025163	Smg5	100	95.580	Mus_caroli
ENSFALG00000001166	-	99	80.301	ENSMUSG00000001415	Smg5	99	95.580	Mus_musculus
ENSFALG00000001166	-	99	79.700	MGP_PahariEiJ_G0026606	Smg5	100	95.580	Mus_pahari
ENSFALG00000001166	-	99	80.301	MGP_SPRETEiJ_G0026104	Smg5	100	95.580	Mus_spretus
ENSFALG00000001166	-	99	75.862	ENSMPUG00000004546	SMG5	58	78.995	Mustela_putorius_furo
ENSFALG00000001166	-	99	80.100	ENSMLUG00000008518	SMG5	58	80.960	Myotis_lucifugus
ENSFALG00000001166	-	98	44.389	ENSNGAG00000012101	-	57	44.536	Nannospalax_galili
ENSFALG00000001166	-	99	82.274	ENSNGAG00000020706	Smg5	58	82.667	Nannospalax_galili
ENSFALG00000001166	-	96	67.233	ENSNBRG00000004332	smg5	60	67.912	Neolamprologus_brichardi
ENSFALG00000001166	-	99	81.742	ENSNLEG00000012439	SMG5	58	81.636	Nomascus_leucogenys
ENSFALG00000001166	-	99	82.833	ENSMEUG00000012834	SMG5	58	83.056	Notamacropus_eugenii
ENSFALG00000001166	-	99	81.742	ENSOPRG00000009152	SMG5	58	81.742	Ochotona_princeps
ENSFALG00000001166	-	99	80.936	ENSODEG00000012237	SMG5	58	80.936	Octodon_degus
ENSFALG00000001166	-	95	61.584	ENSONIG00000008632	smg5	59	64.768	Oreochromis_niloticus
ENSFALG00000001166	-	99	39.333	ENSOCUG00000023338	-	63	39.333	Oryctolagus_cuniculus
ENSFALG00000001166	-	99	83.250	ENSOCUG00000012886	SMG5	59	83.250	Oryctolagus_cuniculus
ENSFALG00000001166	-	96	60.731	ENSORLG00000016239	smg5	59	65.038	Oryzias_latipes
ENSFALG00000001166	-	95	66.610	ENSORLG00020013127	smg5	57	70.698	Oryzias_latipes_hni
ENSFALG00000001166	-	95	66.951	ENSORLG00015019014	smg5	56	71.039	Oryzias_latipes_hsok
ENSFALG00000001166	-	96	62.405	ENSOMEG00000021330	smg5	85	62.104	Oryzias_melastigma
ENSFALG00000001166	-	99	81.575	ENSOGAG00000004966	SMG5	58	81.469	Otolemur_garnettii
ENSFALG00000001166	-	99	82.412	ENSOARG00000005778	SMG5	58	82.304	Ovis_aries
ENSFALG00000001166	-	97	45.312	ENSOARG00000011963	-	58	44.868	Ovis_aries
ENSFALG00000001166	-	99	81.575	ENSPPAG00000011996	SMG5	58	81.469	Pan_paniscus
ENSFALG00000001166	-	99	80.467	ENSPPRG00000011901	SMG5	59	80.467	Panthera_pardus
ENSFALG00000001166	-	99	78.930	ENSPTIG00000007892	SMG5	61	78.930	Panthera_tigris_altaica
ENSFALG00000001166	-	99	81.742	ENSPTRG00000049282	-	58	81.636	Pan_troglodytes
ENSFALG00000001166	-	99	81.742	ENSPTRG00000023925	SMG5	58	81.636	Pan_troglodytes
ENSFALG00000001166	-	99	82.245	ENSPANG00000011201	SMG5	58	82.137	Papio_anubis
ENSFALG00000001166	-	96	69.640	ENSPKIG00000009402	smg5	56	70.719	Paramormyrops_kingsleyae
ENSFALG00000001166	-	100	89.853	ENSPSIG00000015198	SMG5	61	89.853	Pelodiscus_sinensis
ENSFALG00000001166	-	96	64.650	ENSPMGG00000010465	smg5	59	64.818	Periophthalmus_magnuspinnatus
ENSFALG00000001166	-	94	46.062	ENSPEMG00000010022	-	94	45.533	Peromyscus_maniculatus_bairdii
ENSFALG00000001166	-	99	79.967	ENSPEMG00000001819	Smg5	58	80.167	Peromyscus_maniculatus_bairdii
ENSFALG00000001166	-	99	51.667	ENSPMAG00000000410	smg5	57	53.808	Petromyzon_marinus
ENSFALG00000001166	-	99	83.000	ENSPCIG00000018938	SMG5	58	83.000	Phascolarctos_cinereus
ENSFALG00000001166	-	95	60.476	ENSPFOG00000010191	smg5	60	61.640	Poecilia_formosa
ENSFALG00000001166	-	66	79.012	ENSPLAG00000009332	smg5	60	61.347	Poecilia_latipinna
ENSFALG00000001166	-	96	67.330	ENSPMEG00000014105	smg5	58	67.152	Poecilia_mexicana
ENSFALG00000001166	-	95	58.188	ENSPREG00000017713	smg5	60	61.640	Poecilia_reticulata
ENSFALG00000001166	-	99	82.077	ENSPPYG00000000723	SMG5	58	81.970	Pongo_abelii
ENSFALG00000001166	-	99	82.747	ENSPCOG00000004741	SMG5	58	82.638	Propithecus_coquereli
ENSFALG00000001166	-	90	96.000	ENSPVAG00000016748	SMG5	53	96.000	Pteropus_vampyrus
ENSFALG00000001166	-	96	61.185	ENSPNYG00000013397	smg5	59	63.893	Pundamilia_nyererei
ENSFALG00000001166	-	97	62.348	ENSPNAG00000028363	smg5	59	64.778	Pygocentrus_nattereri
ENSFALG00000001166	-	99	80.301	ENSRNOG00000019590	Smg5	58	80.865	Rattus_norvegicus
ENSFALG00000001166	-	99	81.910	ENSRBIG00000027428	SMG5	58	81.803	Rhinopithecus_bieti
ENSFALG00000001166	-	99	81.910	ENSRROG00000030035	SMG5	58	81.803	Rhinopithecus_roxellana
ENSFALG00000001166	-	99	82.245	ENSSBOG00000033339	SMG5	58	82.137	Saimiri_boliviensis_boliviensis
ENSFALG00000001166	-	99	82.972	ENSSHAG00000014163	SMG5	59	82.972	Sarcophilus_harrisii
ENSFALG00000001166	-	79	35.551	ENSSHAG00000000935	-	57	37.965	Sarcophilus_harrisii
ENSFALG00000001166	-	70	37.143	ENSSHAG00000000561	-	55	34.706	Sarcophilus_harrisii
ENSFALG00000001166	-	96	69.270	ENSSFOG00015024175	smg5	57	69.610	Scleropages_formosus
ENSFALG00000001166	-	96	61.218	ENSSMAG00000013059	smg5	59	63.744	Scophthalmus_maximus
ENSFALG00000001166	-	96	60.000	ENSSDUG00000007122	smg5	59	62.963	Seriola_dumerili
ENSFALG00000001166	-	96	60.503	ENSSLDG00000011418	smg5	59	63.487	Seriola_lalandi_dorsalis
ENSFALG00000001166	-	95	70.332	ENSSARG00000012484	SMG5	62	70.332	Sorex_araneus
ENSFALG00000001166	-	100	88.115	ENSSPUG00000002260	SMG5	61	88.795	Sphenodon_punctatus
ENSFALG00000001166	-	96	67.617	ENSSPAG00000014266	smg5	57	68.687	Stegastes_partitus
ENSFALG00000001166	-	98	60.345	ENSSSCG00000039308	-	55	64.148	Sus_scrofa
ENSFALG00000001166	-	99	82.580	ENSSSCG00000006490	-	61	82.471	Sus_scrofa
ENSFALG00000001166	-	64	42.969	ENSSSCG00000037182	-	83	37.356	Sus_scrofa
ENSFALG00000001166	-	100	96.844	ENSTGUG00000003748	-	59	96.844	Taeniopygia_guttata
ENSFALG00000001166	-	97	64.298	ENSTRUG00000012580	smg5	58	65.404	Takifugu_rubripes
ENSFALG00000001166	-	96	67.446	ENSTNIG00000010303	smg5	57	67.446	Tetraodon_nigroviridis
ENSFALG00000001166	-	99	78.045	ENSTTRG00000001401	SMG5	55	81.593	Tursiops_truncatus
ENSFALG00000001166	-	99	80.905	ENSUAMG00000013721	SMG5	58	80.801	Ursus_americanus
ENSFALG00000001166	-	99	79.333	ENSUMAG00000018041	SMG5	61	79.236	Ursus_maritimus
ENSFALG00000001166	-	99	75.084	ENSVPAG00000009446	SMG5	60	75.084	Vicugna_pacos
ENSFALG00000001166	-	99	81.575	ENSVVUG00000005887	SMG5	58	81.469	Vulpes_vulpes
ENSFALG00000001166	-	96	61.832	ENSXCOG00000004379	smg5	74	61.347	Xiphophorus_couchianus
ENSFALG00000001166	-	95	68.143	ENSXMAG00000013499	smg5	56	69.270	Xiphophorus_maculatus