EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000001373 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2344 bases
Position: chrJH603214.1:7330221-7332564
Accession: 101812925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001429	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001437	-	1602	-	ENSFALP00000001429	214 (aa)	XP_005058468	U3JF75

Gene Model

Click here to download ENSFALG00000001373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000001373	-	71	33.113	ENSFALG00000012145	HRAS	85	32.317
ENSFALG00000001373	-	99	34.742	ENSFALG00000011828	-	97	34.742
ENSFALG00000001373	-	71	30.921	ENSFALG00000013196	MRAS	80	30.357
ENSFALG00000001373	-	90	37.306	ENSFALG00000007160	RAB18	91	37.306
ENSFALG00000001373	-	77	30.723	ENSFALG00000007362	RAB36	62	30.723
ENSFALG00000001373	-	77	40.854	ENSFALG00000008011	RAB6A	78	40.854
ENSFALG00000001373	-	76	42.073	ENSFALG00000003709	RAB19	75	42.073
ENSFALG00000001373	-	69	36.054	ENSFALG00000001708	RAB23	69	34.731
ENSFALG00000001373	-	87	38.421	ENSFALG00000011581	RAB33A	86	38.421
ENSFALG00000001373	-	100	55.607	ENSFALG00000000201	RAB39B	100	55.607
ENSFALG00000001373	-	90	37.500	ENSFALG00000007765	RAB30	90	37.500
ENSFALG00000001373	-	74	38.750	ENSFALG00000004886	RAB33B	70	38.750
ENSFALG00000001373	-	71	31.788	ENSFALG00000003867	KRAS	86	31.098
ENSFALG00000001373	-	75	38.125	ENSFALG00000009239	RAB5A	73	38.125
ENSFALG00000001373	-	73	40.373	ENSFALG00000015153	RAB9B	79	40.373
ENSFALG00000001373	-	73	40.994	ENSFALG00000015159	RAB9A	79	40.994
ENSFALG00000001373	-	97	36.190	ENSFALG00000010052	RAB11A	99	36.190
ENSFALG00000001373	-	81	37.356	ENSFALG00000001205	RAB15	82	37.356
ENSFALG00000001373	-	78	39.157	ENSFALG00000002597	RAB25	65	39.157
ENSFALG00000001373	-	99	37.089	ENSFALG00000002594	-	89	37.089
ENSFALG00000001373	-	73	40.385	ENSFALG00000007652	RAB35	72	40.385
ENSFALG00000001373	-	76	38.272	ENSFALG00000012783	RAB17	75	38.272
ENSFALG00000001373	-	95	38.424	ENSFALG00000013624	RAB1A	96	38.424
ENSFALG00000001373	-	87	40.323	ENSFALG00000005613	RAB2A	87	40.323
ENSFALG00000001373	-	74	34.810	ENSFALG00000003276	-	75	34.969
ENSFALG00000001373	-	74	38.650	ENSFALG00000007930	RAB7A	78	38.650
ENSFALG00000001373	-	64	34.532	ENSFALG00000004409	RAB20	57	34.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001373	-	97	60.000	ENSACIG00000016958	si:dkey-34d22.5	97	60.000	Amphilophus_citrinellus
ENSFALG00000001373	-	89	65.625	ENSATEG00000010784	si:dkey-34d22.5	74	65.625	Anabas_testudineus
ENSFALG00000001373	-	100	73.023	ENSCPBG00000011236	-	100	73.023	Chrysemys_picta_bellii
ENSFALG00000001373	-	99	56.561	ENSCSEG00000019183	si:dkey-34d22.5	99	56.561	Cynoglossus_semilaevis
ENSFALG00000001373	-	97	57.674	ENSCVAG00000017064	si:dkey-34d22.5	97	57.674	Cyprinodon_variegatus
ENSFALG00000001373	-	85	41.758	ENSDARG00000100379	si:dkey-34d22.2	98	41.758	Danio_rerio
ENSFALG00000001373	-	94	59.804	ENSFHEG00000012041	si:dkey-34d22.5	91	59.804	Fundulus_heteroclitus
ENSFALG00000001373	-	100	80.000	ENSGALG00000000994	-	100	80.000	Gallus_gallus
ENSFALG00000001373	-	97	57.870	ENSGAFG00000008183	si:dkey-34d22.5	97	57.870	Gambusia_affinis
ENSFALG00000001373	-	94	71.921	ENSGAGG00000004918	-	100	71.921	Gopherus_agassizii
ENSFALG00000001373	-	99	58.605	ENSHCOG00000015692	si:dkey-34d22.5	99	58.605	Hippocampus_comes
ENSFALG00000001373	-	89	64.062	ENSKMAG00000012778	si:dkey-34d22.5	86	64.062	Kryptolebias_marmoratus
ENSFALG00000001373	-	89	64.583	ENSLBEG00000002926	si:dkey-34d22.5	87	64.583	Labrus_bergylta
ENSFALG00000001373	-	98	61.429	ENSLACG00000012674	si:dkey-34d22.5	98	61.429	Latimeria_chalumnae
ENSFALG00000001373	-	100	63.889	ENSLOCG00000003467	si:dkey-34d22.5	100	63.889	Lepisosteus_oculatus
ENSFALG00000001373	-	98	61.395	ENSMMOG00000006846	si:dkey-34d22.5	98	61.395	Mola_mola
ENSFALG00000001373	-	89	62.500	ENSMALG00000013152	si:dkey-34d22.5	86	62.500	Monopterus_albus
ENSFALG00000001373	-	97	59.906	ENSORLG00000014099	si:dkey-34d22.5	97	59.906	Oryzias_latipes
ENSFALG00000001373	-	97	59.906	ENSORLG00020020277	si:dkey-34d22.5	97	59.906	Oryzias_latipes_hni
ENSFALG00000001373	-	97	59.906	ENSORLG00015000142	si:dkey-34d22.5	97	59.906	Oryzias_latipes_hsok
ENSFALG00000001373	-	89	63.542	ENSOMEG00000017958	si:dkey-34d22.5	97	59.813	Oryzias_melastigma
ENSFALG00000001373	-	98	58.411	ENSPKIG00000021209	si:dkey-34d22.5	98	58.411	Paramormyrops_kingsleyae
ENSFALG00000001373	-	93	74.000	ENSPSIG00000006606	-	99	74.000	Pelodiscus_sinensis
ENSFALG00000001373	-	89	66.667	ENSPMGG00000001298	-	97	62.791	Periophthalmus_magnuspinnatus
ENSFALG00000001373	-	100	62.273	ENSPCIG00000022399	-	97	62.273	Phascolarctos_cinereus
ENSFALG00000001373	-	97	57.407	ENSPFOG00000014499	si:dkey-34d22.5	97	57.407	Poecilia_formosa
ENSFALG00000001373	-	97	57.407	ENSPLAG00000007773	si:dkey-34d22.5	97	57.407	Poecilia_latipinna
ENSFALG00000001373	-	97	57.407	ENSPMEG00000012932	si:dkey-34d22.5	97	57.407	Poecilia_mexicana
ENSFALG00000001373	-	91	67.526	ENSSHAG00000008520	-	88	67.526	Sarcophilus_harrisii
ENSFALG00000001373	-	98	59.346	ENSSFOG00015012088	rab42	96	59.346	Scleropages_formosus
ENSFALG00000001373	-	98	59.259	ENSSLDG00000002646	si:dkey-34d22.5	97	59.259	Seriola_lalandi_dorsalis
ENSFALG00000001373	-	97	58.796	ENSSPAG00000012955	si:dkey-34d22.5	97	58.796	Stegastes_partitus
ENSFALG00000001373	-	100	47.196	ENSXETG00000020622	rab39a	100	47.196	Xenopus_tropicalis
ENSFALG00000001373	-	97	57.407	ENSXCOG00000008410	si:dkey-34d22.5	97	57.407	Xiphophorus_couchianus
ENSFALG00000001373	-	97	57.407	ENSXMAG00000029317	si:dkey-34d22.5	97	57.407	Xiphophorus_maculatus