EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001445 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 8657 bases
Position: chrJH603212.1:2373423-2382079
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001507	zf-C2H2	PF00096.26	2.6e-12	1	2
ENSFALP00000001507	zf-C2H2	PF00096.26	2.6e-12	2	2
ENSFALP00000001507	zf-met	PF12874.7	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001516	PRDM12-201	2477	-	ENSFALP00000001507	393 (aa)	-	U3JFF3

Gene Model

Click here to download ENSFALG00000001445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001445	PRDM12	84	92.814	ENSG00000130711	PRDM12	100	88.283	Homo_sapiens
ENSFALG00000001445	PRDM12	89	76.302	ENSAPOG00000016051	prdm12b	100	76.823	Acanthochromis_polyacanthus
ENSFALG00000001445	PRDM12	89	68.493	ENSAPOG00000018234	-	100	68.493	Acanthochromis_polyacanthus
ENSFALG00000001445	PRDM12	81	91.641	ENSAMEG00000016234	PRDM12	99	91.641	Ailuropoda_melanoleuca
ENSFALG00000001445	PRDM12	89	78.457	ENSACIG00000019578	prdm12b	100	78.723	Amphilophus_citrinellus
ENSFALG00000001445	PRDM12	89	78.892	ENSACIG00000005193	-	100	78.892	Amphilophus_citrinellus
ENSFALG00000001445	PRDM12	89	77.368	ENSAOCG00000015040	prdm12b	100	77.632	Amphiprion_ocellaris
ENSFALG00000001445	PRDM12	89	73.890	ENSAPEG00000022849	-	100	74.935	Amphiprion_percula
ENSFALG00000001445	PRDM12	89	77.984	ENSAPEG00000015092	prdm12b	100	78.249	Amphiprion_percula
ENSFALG00000001445	PRDM12	85	82.647	ENSATEG00000014595	-	99	82.647	Anabas_testudineus
ENSFALG00000001445	PRDM12	86	92.941	ENSANAG00000020616	PRDM12	100	92.941	Aotus_nancymaae
ENSFALG00000001445	PRDM12	89	75.888	ENSACLG00000007631	-	100	77.411	Astatotilapia_calliptera
ENSFALG00000001445	PRDM12	89	80.939	ENSACLG00000011876	prdm12b	100	80.939	Astatotilapia_calliptera
ENSFALG00000001445	PRDM12	89	81.564	ENSAMXG00000008540	PRDM12	100	81.564	Astyanax_mexicanus
ENSFALG00000001445	PRDM12	89	83.784	ENSAMXG00000033665	prdm12b	100	85.676	Astyanax_mexicanus
ENSFALG00000001445	PRDM12	84	93.413	ENSBTAG00000023797	PRDM12	100	90.305	Bos_taurus
ENSFALG00000001445	PRDM12	84	93.114	ENSCJAG00000020540	PRDM12	100	90.278	Callithrix_jacchus
ENSFALG00000001445	PRDM12	73	93.471	ENSCAFG00000023076	PRDM12	99	89.097	Canis_familiaris
ENSFALG00000001445	PRDM12	84	93.713	ENSCAFG00020024046	PRDM12	100	89.835	Canis_lupus_dingo
ENSFALG00000001445	PRDM12	84	93.713	ENSCHIG00000025005	PRDM12	100	90.331	Capra_hircus
ENSFALG00000001445	PRDM12	79	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSFALG00000001445	PRDM12	84	93.114	ENSCCAG00000037485	PRDM12	100	89.532	Cebus_capucinus
ENSFALG00000001445	PRDM12	84	93.114	ENSCATG00000020327	PRDM12	100	89.532	Cercocebus_atys
ENSFALG00000001445	PRDM12	84	92.515	ENSCLAG00000005499	PRDM12	92	92.515	Chinchilla_lanigera
ENSFALG00000001445	PRDM12	84	93.114	ENSCSAG00000014756	PRDM12	100	89.286	Chlorocebus_sabaeus
ENSFALG00000001445	PRDM12	89	96.893	ENSCPBG00000022628	PRDM12	100	96.893	Chrysemys_picta_bellii
ENSFALG00000001445	PRDM12	84	93.114	ENSCGRG00001015005	Prdm12	100	88.798	Cricetulus_griseus_chok1gshd
ENSFALG00000001445	PRDM12	89	79.784	ENSCVAG00000017166	prdm12b	100	80.593	Cyprinodon_variegatus
ENSFALG00000001445	PRDM12	89	75.385	ENSCVAG00000000944	-	100	76.154	Cyprinodon_variegatus
ENSFALG00000001445	PRDM12	89	86.339	ENSDARG00000007430	prdm12b	100	86.339	Danio_rerio
ENSFALG00000001445	PRDM12	84	92.814	ENSDNOG00000042302	PRDM12	99	89.751	Dasypus_novemcinctus
ENSFALG00000001445	PRDM12	84	61.370	ENSEBUG00000016780	prdm12b	75	66.667	Eptatretus_burgeri
ENSFALG00000001445	PRDM12	86	93.235	ENSEASG00005008472	PRDM12	100	90.055	Equus_asinus_asinus
ENSFALG00000001445	PRDM12	86	92.941	ENSECAG00000005933	PRDM12	100	89.779	Equus_caballus
ENSFALG00000001445	PRDM12	89	80.000	ENSELUG00000013674	PRDM12	99	80.000	Esox_lucius
ENSFALG00000001445	PRDM12	89	83.784	ENSELUG00000009905	prdm12b	100	83.784	Esox_lucius
ENSFALG00000001445	PRDM12	84	93.713	ENSFCAG00000043086	PRDM12	100	90.083	Felis_catus
ENSFALG00000001445	PRDM12	89	78.877	ENSFHEG00000003944	prdm12b	100	80.214	Fundulus_heteroclitus
ENSFALG00000001445	PRDM12	89	78.036	ENSFHEG00000007746	-	100	78.036	Fundulus_heteroclitus
ENSFALG00000001445	PRDM12	89	81.921	ENSGMOG00000011797	prdm12b	99	81.921	Gadus_morhua
ENSFALG00000001445	PRDM12	89	100.000	ENSGALG00000003895	PRDM12	100	100.000	Gallus_gallus
ENSFALG00000001445	PRDM12	89	78.836	ENSGAFG00000010827	prdm12b	100	80.159	Gambusia_affinis
ENSFALG00000001445	PRDM12	89	79.245	ENSGACG00000016713	prdm12b	100	79.245	Gasterosteus_aculeatus
ENSFALG00000001445	PRDM12	89	97.175	ENSGAGG00000014083	PRDM12	100	97.175	Gopherus_agassizii
ENSFALG00000001445	PRDM12	84	92.515	ENSGGOG00000010568	PRDM12	100	88.251	Gorilla_gorilla
ENSFALG00000001445	PRDM12	90	75.758	ENSHBUG00000022537	-	93	77.411	Haplochromis_burtoni
ENSFALG00000001445	PRDM12	89	79.679	ENSHBUG00000022878	prdm12b	100	79.679	Haplochromis_burtoni
ENSFALG00000001445	PRDM12	84	91.916	ENSHGLG00000013939	PRDM12	100	87.671	Heterocephalus_glaber_female
ENSFALG00000001445	PRDM12	89	75.207	ENSHCOG00000021167	-	100	75.207	Hippocampus_comes
ENSFALG00000001445	PRDM12	82	80.702	ENSHCOG00000003663	prdm12b	100	74.235	Hippocampus_comes
ENSFALG00000001445	PRDM12	89	78.393	ENSIPUG00000019544	PRDM12	100	79.224	Ictalurus_punctatus
ENSFALG00000001445	PRDM12	89	84.783	ENSIPUG00000017053	prdm12b	100	85.326	Ictalurus_punctatus
ENSFALG00000001445	PRDM12	85	93.491	ENSSTOG00000005986	PRDM12	88	93.491	Ictidomys_tridecemlineatus
ENSFALG00000001445	PRDM12	83	93.333	ENSJJAG00000005424	Prdm12	100	93.333	Jaculus_jaculus
ENSFALG00000001445	PRDM12	84	83.432	ENSKMAG00000021205	-	99	81.232	Kryptolebias_marmoratus
ENSFALG00000001445	PRDM12	89	73.020	ENSKMAG00000016921	prdm12b	100	73.515	Kryptolebias_marmoratus
ENSFALG00000001445	PRDM12	89	77.719	ENSLBEG00000017769	prdm12b	100	78.249	Labrus_bergylta
ENSFALG00000001445	PRDM12	89	77.895	ENSLBEG00000007776	-	100	78.421	Labrus_bergylta
ENSFALG00000001445	PRDM12	89	92.351	ENSLACG00000017560	PRDM12	99	92.351	Latimeria_chalumnae
ENSFALG00000001445	PRDM12	89	87.603	ENSLOCG00000005429	prdm12b	99	87.879	Lepisosteus_oculatus
ENSFALG00000001445	PRDM12	84	92.059	ENSLAFG00000006979	PRDM12	93	91.931	Loxodonta_africana
ENSFALG00000001445	PRDM12	89	86.649	ENSMFAG00000040322	PRDM12	100	88.828	Macaca_fascicularis
ENSFALG00000001445	PRDM12	84	93.114	ENSMNEG00000037234	PRDM12	100	89.532	Macaca_nemestrina
ENSFALG00000001445	PRDM12	89	76.289	ENSMAMG00000018988	-	100	77.062	Mastacembelus_armatus
ENSFALG00000001445	PRDM12	89	78.877	ENSMAMG00000013212	prdm12b	100	79.412	Mastacembelus_armatus
ENSFALG00000001445	PRDM12	89	75.505	ENSMZEG00005000415	PRDM12	100	77.020	Maylandia_zebra
ENSFALG00000001445	PRDM12	88	100.000	ENSMGAG00000005438	PRDM12	98	100.000	Meleagris_gallopavo
ENSFALG00000001445	PRDM12	89	89.041	ENSMAUG00000013040	Prdm12	100	89.041	Mesocricetus_auratus
ENSFALG00000001445	PRDM12	86	93.255	ENSMICG00000015480	PRDM12	100	90.055	Microcebus_murinus
ENSFALG00000001445	PRDM12	89	90.909	ENSMOCG00000021026	Prdm12	93	93.255	Microtus_ochrogaster
ENSFALG00000001445	PRDM12	89	96.338	ENSMODG00000012108	PRDM12	100	96.338	Monodelphis_domestica
ENSFALG00000001445	PRDM12	89	68.207	ENSMALG00000021901	prdm12b	99	68.207	Monopterus_albus
ENSFALG00000001445	PRDM12	84	92.814	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.767	Mus_caroli
ENSFALG00000001445	PRDM12	84	92.814	ENSMUSG00000079466	Prdm12	100	88.767	Mus_musculus
ENSFALG00000001445	PRDM12	84	92.814	MGP_PahariEiJ_G0024871	Prdm12	100	88.767	Mus_pahari
ENSFALG00000001445	PRDM12	84	92.814	MGP_SPRETEiJ_G0024331	Prdm12	100	88.767	Mus_spretus
ENSFALG00000001445	PRDM12	82	93.272	ENSNGAG00000018480	Prdm12	100	88.827	Nannospalax_galili
ENSFALG00000001445	PRDM12	89	76.923	ENSNBRG00000024312	-	100	77.198	Neolamprologus_brichardi
ENSFALG00000001445	PRDM12	89	78.780	ENSNBRG00000006727	prdm12b	100	79.045	Neolamprologus_brichardi
ENSFALG00000001445	PRDM12	89	85.634	ENSMEUG00000003828	PRDM12	100	85.634	Notamacropus_eugenii
ENSFALG00000001445	PRDM12	83	92.727	ENSOPRG00000008680	PRDM12	100	92.727	Ochotona_princeps
ENSFALG00000001445	PRDM12	86	92.669	ENSODEG00000016282	PRDM12	64	92.669	Octodon_degus
ENSFALG00000001445	PRDM12	55	96.313	ENSOANG00000001043	PRDM12	100	96.313	Ornithorhynchus_anatinus
ENSFALG00000001445	PRDM12	79	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSFALG00000001445	PRDM12	89	74.359	ENSORLG00000017558	-	100	75.897	Oryzias_latipes
ENSFALG00000001445	PRDM12	89	76.781	ENSORLG00000007114	prdm12b	100	77.573	Oryzias_latipes
ENSFALG00000001445	PRDM12	89	75.853	ENSORLG00020019565	prdm12b	100	77.487	Oryzias_latipes_hni
ENSFALG00000001445	PRDM12	89	74.169	ENSORLG00020013167	-	100	75.703	Oryzias_latipes_hni
ENSFALG00000001445	PRDM12	89	74.872	ENSORLG00015003435	-	100	76.410	Oryzias_latipes_hsok
ENSFALG00000001445	PRDM12	89	76.517	ENSORLG00015007621	prdm12b	100	77.573	Oryzias_latipes_hsok
ENSFALG00000001445	PRDM12	89	76.240	ENSOMEG00000004134	prdm12b	100	77.546	Oryzias_melastigma
ENSFALG00000001445	PRDM12	89	78.249	ENSOMEG00000007762	-	100	78.515	Oryzias_melastigma
ENSFALG00000001445	PRDM12	84	93.694	ENSOGAG00000007557	PRDM12	100	93.694	Otolemur_garnettii
ENSFALG00000001445	PRDM12	72	91.986	ENSPPAG00000031506	-	99	90.444	Pan_paniscus
ENSFALG00000001445	PRDM12	89	82.730	ENSPPRG00000023024	PRDM12	92	82.730	Panthera_pardus
ENSFALG00000001445	PRDM12	84	92.814	ENSPTRG00000021475	PRDM12	100	88.525	Pan_troglodytes
ENSFALG00000001445	PRDM12	84	92.814	ENSPTRG00000043324	-	100	88.525	Pan_troglodytes
ENSFALG00000001445	PRDM12	84	93.114	ENSPANG00000025967	PRDM12	100	89.532	Papio_anubis
ENSFALG00000001445	PRDM12	87	77.684	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSFALG00000001445	PRDM12	89	84.946	ENSPKIG00000007228	prdm12b	100	85.215	Paramormyrops_kingsleyae
ENSFALG00000001445	PRDM12	89	96.328	ENSPSIG00000006739	PRDM12	100	96.328	Pelodiscus_sinensis
ENSFALG00000001445	PRDM12	89	79.348	ENSPMGG00000008867	prdm12b	100	79.891	Periophthalmus_magnuspinnatus
ENSFALG00000001445	PRDM12	89	75.979	ENSPMGG00000002356	-	100	75.979	Periophthalmus_magnuspinnatus
ENSFALG00000001445	PRDM12	84	93.072	ENSPEMG00000009969	Prdm12	96	89.205	Peromyscus_maniculatus_bairdii
ENSFALG00000001445	PRDM12	89	96.338	ENSPCIG00000024119	PRDM12	100	96.338	Phascolarctos_cinereus
ENSFALG00000001445	PRDM12	89	80.533	ENSPFOG00000019841	prdm12b	100	80.863	Poecilia_formosa
ENSFALG00000001445	PRDM12	89	78.215	ENSPLAG00000016626	prdm12b	100	79.528	Poecilia_latipinna
ENSFALG00000001445	PRDM12	87	77.898	ENSPMEG00000016698	prdm12b	100	78.976	Poecilia_mexicana
ENSFALG00000001445	PRDM12	84	78.488	ENSPREG00000003211	-	94	78.488	Poecilia_reticulata
ENSFALG00000001445	PRDM12	89	78.010	ENSPREG00000015073	prdm12b	100	79.581	Poecilia_reticulata
ENSFALG00000001445	PRDM12	87	91.570	ENSPPYG00000019694	PRDM12	98	91.570	Pongo_abelii
ENSFALG00000001445	PRDM12	84	93.713	ENSPCOG00000022255	PRDM12	100	89.617	Propithecus_coquereli
ENSFALG00000001445	PRDM12	84	93.413	ENSPVAG00000001511	PRDM12	100	89.071	Pteropus_vampyrus
ENSFALG00000001445	PRDM12	89	75.505	ENSPNYG00000013589	-	100	77.020	Pundamilia_nyererei
ENSFALG00000001445	PRDM12	89	78.989	ENSPNYG00000009607	prdm12b	100	78.989	Pundamilia_nyererei
ENSFALG00000001445	PRDM12	89	85.054	ENSPNAG00000024532	prdm12b	100	86.685	Pygocentrus_nattereri
ENSFALG00000001445	PRDM12	89	76.408	ENSPNAG00000013396	PRDM12	100	76.882	Pygocentrus_nattereri
ENSFALG00000001445	PRDM12	84	92.814	ENSRNOG00000009218	Prdm12	100	88.767	Rattus_norvegicus
ENSFALG00000001445	PRDM12	80	93.375	ENSRBIG00000042712	PRDM12	98	86.275	Rhinopithecus_bieti
ENSFALG00000001445	PRDM12	81	93.458	ENSRROG00000043554	PRDM12	100	93.458	Rhinopithecus_roxellana
ENSFALG00000001445	PRDM12	89	95.506	ENSSHAG00000015972	PRDM12	100	95.506	Sarcophilus_harrisii
ENSFALG00000001445	PRDM12	89	75.321	ENSSMAG00000003754	prdm12b	100	75.835	Scophthalmus_maximus
ENSFALG00000001445	PRDM12	89	77.865	ENSSDUG00000023498	prdm12b	100	77.865	Seriola_dumerili
ENSFALG00000001445	PRDM12	85	82.647	ENSSDUG00000019071	-	100	79.474	Seriola_dumerili
ENSFALG00000001445	PRDM12	89	77.953	ENSSLDG00000009557	prdm12b	100	77.953	Seriola_lalandi_dorsalis
ENSFALG00000001445	PRDM12	89	83.662	ENSSLDG00000013562	-	100	83.662	Seriola_lalandi_dorsalis
ENSFALG00000001445	PRDM12	89	96.328	ENSSPUG00000013424	PRDM12	100	96.328	Sphenodon_punctatus
ENSFALG00000001445	PRDM12	89	69.191	ENSSPAG00000022420	-	100	72.087	Stegastes_partitus
ENSFALG00000001445	PRDM12	89	76.903	ENSSPAG00000018824	prdm12b	100	77.953	Stegastes_partitus
ENSFALG00000001445	PRDM12	84	93.713	ENSSSCG00000005703	PRDM12	100	89.835	Sus_scrofa
ENSFALG00000001445	PRDM12	89	79.189	ENSTRUG00000018659	prdm12b	100	79.459	Takifugu_rubripes
ENSFALG00000001445	PRDM12	89	79.501	ENSTRUG00000013239	-	100	79.501	Takifugu_rubripes
ENSFALG00000001445	PRDM12	89	77.933	ENSTNIG00000005859	-	99	77.933	Tetraodon_nigroviridis
ENSFALG00000001445	PRDM12	89	78.378	ENSTNIG00000009020	prdm12b	99	78.649	Tetraodon_nigroviridis
ENSFALG00000001445	PRDM12	84	93.713	ENSUAMG00000009653	PRDM12	94	92.962	Ursus_americanus
ENSFALG00000001445	PRDM12	84	93.675	ENSVVUG00000027662	PRDM12	79	93.675	Vulpes_vulpes
ENSFALG00000001445	PRDM12	89	79.255	ENSXCOG00000002836	prdm12b	100	80.319	Xiphophorus_couchianus
ENSFALG00000001445	PRDM12	89	78.933	ENSXMAG00000005537	prdm12b	100	80.000	Xiphophorus_maculatus
ENSFALG00000001445	PRDM12	89	76.302	ENSXMAG00000028012	-	100	77.083	Xiphophorus_maculatus