EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001464 (Gene tree)
Gene ID: -
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 24425 bases
Position: chrJH603212.1:3036959-3061383
Accession: 445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001525	SEN1_N	PF12726.7	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001534	SETX-201	7399	-	ENSFALP00000001525	2465 (aa)	-	U3JFH1

Gene Model

Click here to download ENSFALG00000001464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001464	SETX	89	67.013	ENSG00000107290	SETX	80	67.013	Homo_sapiens
ENSFALG00000001464	SETX	55	45.225	ENSAMXG00000014406	-	83	41.186	Astyanax_mexicanus
ENSFALG00000001464	SETX	86	73.378	ENSCJAG00000018245	SETX	78	73.378	Callithrix_jacchus
ENSFALG00000001464	SETX	86	72.213	ENSCPOG00000001492	SETX	78	72.213	Cavia_porcellus
ENSFALG00000001464	SETX	83	74.713	ENSCLAG00000012582	SETX	77	74.713	Chinchilla_lanigera
ENSFALG00000001464	SETX	60	75.693	ENSETEG00000008111	-	55	75.693	Echinops_telfairi
ENSFALG00000001464	SETX	75	44.314	ENSELUG00000022536	-	79	44.314	Esox_lucius
ENSFALG00000001464	SETX	86	72.833	ENSFCAG00000007102	SETX	78	72.833	Felis_catus
ENSFALG00000001464	SETX	89	63.596	ENSGGOG00000027664	SETX	80	63.596	Gorilla_gorilla
ENSFALG00000001464	SETX	72	45.124	ENSIPUG00000006685	setx	75	45.124	Ictalurus_punctatus
ENSFALG00000001464	SETX	87	53.205	ENSLOCG00000004264	SETX	87	53.429	Lepisosteus_oculatus
ENSFALG00000001464	SETX	51	48.647	ENSLAFG00000017327	-	96	48.760	Loxodonta_africana
ENSFALG00000001464	SETX	85	69.573	ENSMOCG00000000848	Setx	79	69.573	Microtus_ochrogaster
ENSFALG00000001464	SETX	82	69.634	MGP_PahariEiJ_G0024821	Setx	79	69.634	Mus_pahari
ENSFALG00000001464	SETX	89	65.527	ENSNLEG00000012839	SETX	82	65.527	Nomascus_leucogenys
ENSFALG00000001464	SETX	76	74.761	ENSOCUG00000005616	SETX	69	74.761	Oryctolagus_cuniculus
ENSFALG00000001464	SETX	86	72.000	ENSOGAG00000013387	SETX	77	72.000	Otolemur_garnettii
ENSFALG00000001464	SETX	86	72.379	ENSPPAG00000004108	SETX	78	72.379	Pan_paniscus
ENSFALG00000001464	SETX	86	72.667	ENSPPRG00000012867	SETX	78	72.667	Panthera_pardus
ENSFALG00000001464	SETX	81	72.667	ENSPTIG00000021101	SETX	78	72.667	Panthera_tigris_altaica
ENSFALG00000001464	SETX	86	72.213	ENSPTRG00000021495	SETX	78	72.213	Pan_troglodytes
ENSFALG00000001464	SETX	83	49.832	ENSPKIG00000025162	SETX	81	49.832	Paramormyrops_kingsleyae
ENSFALG00000001464	SETX	91	66.521	ENSSPUG00000016332	SETX	84	70.016	Sphenodon_punctatus
ENSFALG00000001464	SETX	86	73.000	ENSSSCG00000005724	SETX	77	75.000	Sus_scrofa
ENSFALG00000001464	SETX	99	87.591	ENSTGUG00000005117	SETX	98	87.591	Taeniopygia_guttata
ENSFALG00000001464	SETX	86	66.444	ENSXETG00000006254	setx	90	64.229	Xenopus_tropicalis