EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000001479 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 9208 bases
Position: chrJH603212.1:3335218-3344425
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001541	zf-C2H2	PF00096.26	7.2e-29	1	5
ENSFALP00000001541	zf-C2H2	PF00096.26	7.2e-29	2	5
ENSFALP00000001541	zf-C2H2	PF00096.26	7.2e-29	3	5
ENSFALP00000001541	zf-C2H2	PF00096.26	7.2e-29	4	5
ENSFALP00000001541	zf-C2H2	PF00096.26	7.2e-29	5	5
ENSFALP00000001541	zf-met	PF12874.7	1.5e-08	1	2
ENSFALP00000001541	zf-met	PF12874.7	1.5e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001550	GFI1B-201	1443	-	ENSFALP00000001541	362 (aa)	-	U3JFI7

Gene Model

Click here to download ENSFALG00000001479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000001479	GFI1B	58	47.059	ENSFALG00000004682	ZNF236	55	47.059
ENSFALG00000001479	GFI1B	69	34.559	ENSFALG00000009796	ZBTB48	65	34.559
ENSFALG00000001479	GFI1B	51	37.288	ENSFALG00000005762	-	54	37.288
ENSFALG00000001479	GFI1B	56	45.918	ENSFALG00000014367	-	93	42.857
ENSFALG00000001479	GFI1B	53	47.561	ENSFALG00000009044	-	100	47.561
ENSFALG00000001479	GFI1B	54	37.209	ENSFALG00000008017	-	100	37.209
ENSFALG00000001479	GFI1B	53	41.071	ENSFALG00000005718	SCRT2	63	41.071
ENSFALG00000001479	GFI1B	63	37.374	ENSFALG00000014292	ZNF319	83	37.374
ENSFALG00000001479	GFI1B	53	41.558	ENSFALG00000013162	ZFP64	51	30.876
ENSFALG00000001479	GFI1B	54	37.719	ENSFALG00000012974	-	62	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001479	GFI1B	100	55.586	ENSAPOG00000001296	gfi1b	100	55.586	Acanthochromis_polyacanthus
ENSFALG00000001479	GFI1B	69	65.079	ENSACIG00000002190	gfi1b	74	65.079	Amphilophus_citrinellus
ENSFALG00000001479	GFI1B	100	55.858	ENSAOCG00000021187	gfi1b	100	55.858	Amphiprion_ocellaris
ENSFALG00000001479	GFI1B	100	56.131	ENSAPEG00000016196	gfi1b	100	56.131	Amphiprion_percula
ENSFALG00000001479	GFI1B	100	54.201	ENSATEG00000002534	gfi1b	100	54.201	Anabas_testudineus
ENSFALG00000001479	GFI1B	100	81.818	ENSAPLG00000003373	GFI1B	100	81.818	Anas_platyrhynchos
ENSFALG00000001479	GFI1B	100	53.659	ENSACLG00000027053	gfi1b	100	53.659	Astatotilapia_calliptera
ENSFALG00000001479	GFI1B	100	55.676	ENSAMXG00000037544	GFI1B	100	55.676	Astyanax_mexicanus
ENSFALG00000001479	GFI1B	100	63.757	ENSCAPG00000010404	GFI1B	100	63.926	Cavia_aperea
ENSFALG00000001479	GFI1B	100	74.324	ENSCPBG00000021186	GFI1B	100	74.324	Chrysemys_picta_bellii
ENSFALG00000001479	GFI1B	100	53.639	ENSCSEG00000001315	gfi1b	100	53.639	Cynoglossus_semilaevis
ENSFALG00000001479	GFI1B	100	54.121	ENSCVAG00000017168	gfi1b	100	54.121	Cyprinodon_variegatus
ENSFALG00000001479	GFI1B	100	56.873	ENSDARG00000079947	gfi1b	97	70.656	Danio_rerio
ENSFALG00000001479	GFI1B	58	93.103	ENSEEUG00000012609	-	71	93.103	Erinaceus_europaeus
ENSFALG00000001479	GFI1B	100	56.098	ENSELUG00000016933	gfi1b	100	56.098	Esox_lucius
ENSFALG00000001479	GFI1B	100	53.439	ENSFHEG00000015138	gfi1b	100	53.439	Fundulus_heteroclitus
ENSFALG00000001479	GFI1B	71	68.462	ENSGMOG00000019123	gfi1b	87	68.462	Gadus_morhua
ENSFALG00000001479	GFI1B	100	81.868	ENSGALG00000003478	GFI1B	100	81.868	Gallus_gallus
ENSFALG00000001479	GFI1B	71	65.637	ENSGAFG00000003059	gfi1b	98	65.637	Gambusia_affinis
ENSFALG00000001479	GFI1B	100	52.208	ENSGACG00000018134	gfi1b	100	52.208	Gasterosteus_aculeatus
ENSFALG00000001479	GFI1B	100	76.033	ENSGAGG00000021327	GFI1B	100	76.033	Gopherus_agassizii
ENSFALG00000001479	GFI1B	100	53.659	ENSHBUG00000005451	gfi1b	100	53.659	Haplochromis_burtoni
ENSFALG00000001479	GFI1B	100	53.406	ENSHCOG00000013713	gfi1b	100	53.406	Hippocampus_comes
ENSFALG00000001479	GFI1B	100	55.946	ENSIPUG00000012769	gfi1b	100	55.946	Ictalurus_punctatus
ENSFALG00000001479	GFI1B	99	65.867	ENSJJAG00000016355	Gfi1b	100	65.867	Jaculus_jaculus
ENSFALG00000001479	GFI1B	100	54.521	ENSKMAG00000016047	gfi1b	100	54.521	Kryptolebias_marmoratus
ENSFALG00000001479	GFI1B	100	54.301	ENSLBEG00000020297	gfi1b	99	54.324	Labrus_bergylta
ENSFALG00000001479	GFI1B	100	61.370	ENSLACG00000012207	GFI1B	100	61.370	Latimeria_chalumnae
ENSFALG00000001479	GFI1B	100	57.453	ENSLOCG00000005750	gfi1b	100	57.453	Lepisosteus_oculatus
ENSFALG00000001479	GFI1B	100	64.208	ENSLAFG00000022367	GFI1B	100	64.481	Loxodonta_africana
ENSFALG00000001479	GFI1B	100	54.891	ENSMAMG00000003040	gfi1b	100	54.891	Mastacembelus_armatus
ENSFALG00000001479	GFI1B	99	53.804	ENSMZEG00005015594	gfi1b	99	53.804	Maylandia_zebra
ENSFALG00000001479	GFI1B	100	81.319	ENSMGAG00000006129	GFI1B	100	81.319	Meleagris_gallopavo
ENSFALG00000001479	GFI1B	100	56.044	ENSMMOG00000011764	gfi1b	100	56.044	Mola_mola
ENSFALG00000001479	GFI1B	100	66.033	ENSMODG00000012600	GFI1B	100	66.033	Monodelphis_domestica
ENSFALG00000001479	GFI1B	100	53.825	ENSMALG00000004034	gfi1b	100	53.825	Monopterus_albus
ENSFALG00000001479	GFI1B	99	65.041	ENSNGAG00000003333	Gfi1b	100	65.041	Nannospalax_galili
ENSFALG00000001479	GFI1B	100	53.476	ENSNBRG00000012391	gfi1b	100	53.476	Neolamprologus_brichardi
ENSFALG00000001479	GFI1B	100	53.476	ENSONIG00000013011	gfi1b	94	71.845	Oreochromis_niloticus
ENSFALG00000001479	GFI1B	100	63.462	ENSOANG00000014723	GFI1B	100	63.462	Ornithorhynchus_anatinus
ENSFALG00000001479	GFI1B	100	81.538	ENSORLG00000014390	GFI1B	96	46.645	Oryzias_latipes
ENSFALG00000001479	GFI1B	100	54.247	ENSORLG00020003719	GFI1B	100	54.247	Oryzias_latipes_hni
ENSFALG00000001479	GFI1B	100	54.247	ENSORLG00015017142	gfi1b	100	54.247	Oryzias_latipes_hsok
ENSFALG00000001479	GFI1B	100	51.622	ENSOMEG00000015149	GFI1B	100	52.747	Oryzias_melastigma
ENSFALG00000001479	GFI1B	100	63.415	ENSOGAG00000008879	GFI1B	100	63.415	Otolemur_garnettii
ENSFALG00000001479	GFI1B	100	57.104	ENSPKIG00000007643	gfi1b	100	57.104	Paramormyrops_kingsleyae
ENSFALG00000001479	GFI1B	100	72.703	ENSPSIG00000012112	GFI1B	100	72.703	Pelodiscus_sinensis
ENSFALG00000001479	GFI1B	99	52.304	ENSPMGG00000006021	gfi1b	99	52.304	Periophthalmus_magnuspinnatus
ENSFALG00000001479	GFI1B	100	65.854	ENSPCIG00000019724	GFI1B	100	65.761	Phascolarctos_cinereus
ENSFALG00000001479	GFI1B	100	53.134	ENSPFOG00000003460	gfi1b	100	53.134	Poecilia_formosa
ENSFALG00000001479	GFI1B	100	53.846	ENSPLAG00000021960	GFI1B	100	53.846	Poecilia_latipinna
ENSFALG00000001479	GFI1B	100	52.830	ENSPLAG00000017181	GFI1B	100	52.830	Poecilia_latipinna
ENSFALG00000001479	GFI1B	100	53.571	ENSPMEG00000019220	gfi1b	100	53.571	Poecilia_mexicana
ENSFALG00000001479	GFI1B	100	53.571	ENSPMEG00000001556	GFI1B	100	53.571	Poecilia_mexicana
ENSFALG00000001479	GFI1B	100	54.121	ENSPREG00000021718	gfi1b	100	54.121	Poecilia_reticulata
ENSFALG00000001479	GFI1B	100	52.973	ENSPNYG00000018422	gfi1b	100	52.973	Pundamilia_nyererei
ENSFALG00000001479	GFI1B	100	57.104	ENSPNAG00000021118	gfi1b	100	57.104	Pygocentrus_nattereri
ENSFALG00000001479	GFI1B	100	58.575	ENSSHAG00000006462	GFI1B	100	58.575	Sarcophilus_harrisii
ENSFALG00000001479	GFI1B	98	50.156	ENSSFOG00015011566	gfi1b	90	49.387	Scleropages_formosus
ENSFALG00000001479	GFI1B	100	53.908	ENSSMAG00000015181	gfi1b	99	53.425	Scophthalmus_maximus
ENSFALG00000001479	GFI1B	100	54.717	ENSSDUG00000011604	gfi1b	100	54.717	Seriola_dumerili
ENSFALG00000001479	GFI1B	100	54.987	ENSSLDG00000013823	gfi1b	100	54.987	Seriola_lalandi_dorsalis
ENSFALG00000001479	GFI1B	100	59.290	ENSSPUG00000016039	GFI1B	100	59.290	Sphenodon_punctatus
ENSFALG00000001479	GFI1B	100	54.670	ENSSPAG00000022914	gfi1b	100	54.670	Stegastes_partitus
ENSFALG00000001479	GFI1B	53	100.000	ENSTGUG00000005282	-	100	100.000	Taeniopygia_guttata
ENSFALG00000001479	GFI1B	52	87.368	ENSTGUG00000015953	-	100	87.368	Taeniopygia_guttata
ENSFALG00000001479	GFI1B	100	53.951	ENSTRUG00000004525	gfi1b	100	53.951	Takifugu_rubripes
ENSFALG00000001479	GFI1B	100	54.795	ENSTNIG00000003834	gfi1b	100	54.795	Tetraodon_nigroviridis
ENSFALG00000001479	GFI1B	91	96.552	ENSTBEG00000014459	GFI1B	83	96.552	Tupaia_belangeri
ENSFALG00000001479	GFI1B	100	55.200	ENSXETG00000006263	gfi1b	100	55.200	Xenopus_tropicalis
ENSFALG00000001479	GFI1B	100	54.121	ENSXMAG00000027589	gfi1b	100	54.121	Xiphophorus_maculatus