EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001646 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 13580 bases
Position: chrJH603472.1:253757-267336
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001712	R3H	PF01424.22	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001721	R3HCC1-201	2970	-	ENSFALP00000001712	596 (aa)	-	U3JG08

Gene Model

Click here to download ENSFALG00000001646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001646	R3HCC1	50	39.610	ENSAPOG00000003616	r3hcc1	66	39.610	Acanthochromis_polyacanthus
ENSFALG00000001646	R3HCC1	50	38.182	ENSACIG00000017144	r3hcc1	90	39.216	Amphilophus_citrinellus
ENSFALG00000001646	R3HCC1	80	40.361	ENSACAG00000016627	R3HCC1	70	60.265	Anolis_carolinensis
ENSFALG00000001646	R3HCC1	82	38.800	ENSBTAG00000025830	R3HCC1	69	51.829	Bos_taurus
ENSFALG00000001646	R3HCC1	82	37.500	ENSCJAG00000020118	R3HCC1	60	70.130	Callithrix_jacchus
ENSFALG00000001646	R3HCC1	56	49.351	ENSCAFG00000009210	R3HCC1	71	49.351	Canis_familiaris
ENSFALG00000001646	R3HCC1	61	48.193	ENSCLAG00000015556	R3HCC1	65	47.904	Chinchilla_lanigera
ENSFALG00000001646	R3HCC1	59	38.065	ENSCSEG00000005748	r3hcc1	69	38.065	Cynoglossus_semilaevis
ENSFALG00000001646	R3HCC1	50	36.313	ENSCVAG00000002640	r3hcc1	75	36.207	Cyprinodon_variegatus
ENSFALG00000001646	R3HCC1	55	36.774	ENSDARG00000099593	r3hcc1	74	37.415	Danio_rerio
ENSFALG00000001646	R3HCC1	84	36.571	ENSETEG00000001147	R3HCC1	96	35.686	Echinops_telfairi
ENSFALG00000001646	R3HCC1	55	51.462	ENSEASG00005018782	R3HCC1	58	50.617	Equus_asinus_asinus
ENSFALG00000001646	R3HCC1	58	50.515	ENSFCAG00000012395	R3HCC1	73	51.412	Felis_catus
ENSFALG00000001646	R3HCC1	51	37.931	ENSGAFG00000008747	-	70	38.931	Gambusia_affinis
ENSFALG00000001646	R3HCC1	55	36.774	ENSGACG00000008447	r3hcc1	73	37.888	Gasterosteus_aculeatus
ENSFALG00000001646	R3HCC1	81	46.544	ENSGAGG00000018009	R3HCC1	71	44.700	Gopherus_agassizii
ENSFALG00000001646	R3HCC1	50	38.095	ENSHCOG00000011745	r3hcc1	72	37.857	Hippocampus_comes
ENSFALG00000001646	R3HCC1	53	36.994	ENSIPUG00000024504	r3hcc1	62	41.549	Ictalurus_punctatus
ENSFALG00000001646	R3HCC1	60	52.830	ENSSTOG00000027130	R3HCC1	67	52.830	Ictidomys_tridecemlineatus
ENSFALG00000001646	R3HCC1	84	39.065	ENSLAFG00000016137	R3HCC1	94	39.038	Loxodonta_africana
ENSFALG00000001646	R3HCC1	82	39.511	ENSMMUG00000016655	R3HCC1	59	71.429	Macaca_mulatta
ENSFALG00000001646	R3HCC1	54	39.706	ENSMAMG00000018146	r3hcc1	70	39.706	Mastacembelus_armatus
ENSFALG00000001646	R3HCC1	60	59.064	ENSMGAG00000001356	R3HCC1	70	60.773	Meleagris_gallopavo
ENSFALG00000001646	R3HCC1	81	37.897	MGP_CAROLIEiJ_G0019467	R3hcc1	97	38.277	Mus_caroli
ENSFALG00000001646	R3HCC1	81	37.822	ENSMUSG00000034194	R3hcc1	97	38.337	Mus_musculus
ENSFALG00000001646	R3HCC1	81	39.105	MGP_PahariEiJ_G0030484	R3hcc1	97	39.130	Mus_pahari
ENSFALG00000001646	R3HCC1	81	37.698	MGP_SPRETEiJ_G0020359	R3hcc1	97	38.134	Mus_spretus
ENSFALG00000001646	R3HCC1	82	37.323	ENSMLUG00000000266	R3HCC1	89	39.256	Myotis_lucifugus
ENSFALG00000001646	R3HCC1	54	52.439	ENSMEUG00000010587	R3HCC1	73	52.439	Notamacropus_eugenii
ENSFALG00000001646	R3HCC1	81	38.571	ENSODEG00000007529	R3HCC1	97	38.182	Octodon_degus
ENSFALG00000001646	R3HCC1	53	51.572	ENSOCUG00000023554	R3HCC1	52	54.902	Oryctolagus_cuniculus
ENSFALG00000001646	R3HCC1	57	50.802	ENSPPRG00000002522	R3HCC1	64	64.583	Panthera_pardus
ENSFALG00000001646	R3HCC1	51	49.669	ENSPTIG00000011230	R3HCC1	57	69.231	Panthera_tigris_altaica
ENSFALG00000001646	R3HCC1	60	56.906	ENSPSIG00000017664	R3HCC1	80	56.906	Pelodiscus_sinensis
ENSFALG00000001646	R3HCC1	55	45.139	ENSPCIG00000022718	-	83	36.285	Phascolarctos_cinereus
ENSFALG00000001646	R3HCC1	55	36.000	ENSPFOG00000022301	r3hcc1	70	35.882	Poecilia_formosa
ENSFALG00000001646	R3HCC1	51	38.732	ENSPLAG00000010794	r3hcc1	70	35.714	Poecilia_latipinna
ENSFALG00000001646	R3HCC1	55	36.000	ENSPMEG00000022515	r3hcc1	70	35.882	Poecilia_mexicana
ENSFALG00000001646	R3HCC1	51	51.592	ENSPCAG00000012229	R3HCC1	65	51.592	Procavia_capensis
ENSFALG00000001646	R3HCC1	82	38.048	ENSRNOG00000016777	AABR07018321.1	79	39.157	Rattus_norvegicus
ENSFALG00000001646	R3HCC1	56	49.383	ENSSBOG00000022590	R3HCC1	77	49.383	Saimiri_boliviensis_boliviensis
ENSFALG00000001646	R3HCC1	51	37.063	ENSSLDG00000019031	r3hcc1	70	36.424	Seriola_lalandi_dorsalis
ENSFALG00000001646	R3HCC1	83	34.646	ENSSSCG00000037347	-	92	32.673	Sus_scrofa
ENSFALG00000001646	R3HCC1	53	33.784	ENSTRUG00000015880	r3hcc1	79	33.784	Takifugu_rubripes
ENSFALG00000001646	R3HCC1	82	35.656	ENSTTRG00000012247	R3HCC1	93	36.345	Tursiops_truncatus
ENSFALG00000001646	R3HCC1	61	50.000	ENSVVUG00000005056	R3HCC1	68	50.000	Vulpes_vulpes
ENSFALG00000001646	R3HCC1	63	34.682	ENSXCOG00000017626	r3hcc1	69	39.333	Xiphophorus_couchianus
ENSFALG00000001646	R3HCC1	65	35.465	ENSXMAG00000018375	r3hcc1	70	39.855	Xiphophorus_maculatus