EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001895 (Gene tree)
Gene ID: -
Gene Symbol: CCDC12
Alias: MGC23918
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 12435 bases
Position: chrJH603388.1:16443-28877
Accession: 28332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001974	cwf18	PF08315.12	8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001986	CCDC12-201	489	-	ENSFALP00000001974	163 (aa)	-	U3JGS0

Gene Model

Click here to download ENSFALG00000001895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001895	CCDC12	98	64.780	ENSG00000160799	CCDC12	94	65.409	Homo_sapiens
ENSFALG00000001895	CCDC12	92	65.333	ENSAPOG00000014426	ccdc12	54	65.333	Acanthochromis_polyacanthus
ENSFALG00000001895	CCDC12	98	64.780	ENSAMEG00000012658	CCDC12	94	64.780	Ailuropoda_melanoleuca
ENSFALG00000001895	CCDC12	70	76.316	ENSACIG00000015192	ccdc12	80	76.316	Amphilophus_citrinellus
ENSFALG00000001895	CCDC12	71	76.522	ENSACIG00000022676	-	81	76.522	Amphilophus_citrinellus
ENSFALG00000001895	CCDC12	98	63.522	ENSAOCG00000024127	ccdc12	93	63.522	Amphiprion_ocellaris
ENSFALG00000001895	CCDC12	98	63.522	ENSAPEG00000009155	ccdc12	82	63.522	Amphiprion_percula
ENSFALG00000001895	CCDC12	83	71.111	ENSATEG00000004807	ccdc12	99	71.111	Anabas_testudineus
ENSFALG00000001895	CCDC12	82	86.466	ENSAPLG00000005482	CCDC12	96	86.466	Anas_platyrhynchos
ENSFALG00000001895	CCDC12	93	72.078	ENSACAG00000004727	CCDC12	78	72.078	Anolis_carolinensis
ENSFALG00000001895	CCDC12	83	71.324	ENSANAG00000024483	CCDC12	100	72.059	Aotus_nancymaae
ENSFALG00000001895	CCDC12	93	53.947	ENSACLG00000012742	-	92	53.947	Astatotilapia_calliptera
ENSFALG00000001895	CCDC12	98	62.893	ENSACLG00000005356	ccdc12	96	62.893	Astatotilapia_calliptera
ENSFALG00000001895	CCDC12	98	62.893	ENSAMXG00000016319	ccdc12	96	62.893	Astyanax_mexicanus
ENSFALG00000001895	CCDC12	88	68.531	ENSBTAG00000011311	CCDC12	89	67.320	Bos_taurus
ENSFALG00000001895	CCDC12	53	44.944	WBGene00022092	Y69A2AR.21	62	42.593	Caenorhabditis_elegans
ENSFALG00000001895	CCDC12	98	64.780	ENSCJAG00000002280	CCDC12	94	65.409	Callithrix_jacchus
ENSFALG00000001895	CCDC12	98	64.780	ENSCAFG00000013588	CCDC12	94	64.780	Canis_familiaris
ENSFALG00000001895	CCDC12	84	70.803	ENSCAFG00020014024	CCDC12	75	70.803	Canis_lupus_dingo
ENSFALG00000001895	CCDC12	88	68.531	ENSCHIG00000014512	CCDC12	89	67.320	Capra_hircus
ENSFALG00000001895	CCDC12	98	63.522	ENSTSYG00000032837	CCDC12	94	64.151	Carlito_syrichta
ENSFALG00000001895	CCDC12	98	64.151	ENSCPOG00000032515	CCDC12	94	64.151	Cavia_porcellus
ENSFALG00000001895	CCDC12	98	64.780	ENSCCAG00000020126	CCDC12	87	65.409	Cebus_capucinus
ENSFALG00000001895	CCDC12	53	76.744	ENSCATG00000033681	CCDC12	86	53.988	Cercocebus_atys
ENSFALG00000001895	CCDC12	98	64.780	ENSCLAG00000016013	CCDC12	94	64.780	Chinchilla_lanigera
ENSFALG00000001895	CCDC12	98	64.780	ENSCSAG00000016154	CCDC12	75	70.803	Chlorocebus_sabaeus
ENSFALG00000001895	CCDC12	94	72.078	ENSCPBG00000015804	CCDC12	74	72.078	Chrysemys_picta_bellii
ENSFALG00000001895	CCDC12	90	45.270	ENSCING00000005261	-	88	45.270	Ciona_intestinalis
ENSFALG00000001895	CCDC12	98	64.780	ENSCANG00000020857	CCDC12	75	70.803	Colobus_angolensis_palliatus
ENSFALG00000001895	CCDC12	98	63.522	ENSCGRG00001000459	Ccdc12	94	63.522	Cricetulus_griseus_chok1gshd
ENSFALG00000001895	CCDC12	98	63.522	ENSCGRG00000012816	Ccdc12	94	63.522	Cricetulus_griseus_crigri
ENSFALG00000001895	CCDC12	97	63.291	ENSCSEG00000004543	ccdc12	95	63.291	Cynoglossus_semilaevis
ENSFALG00000001895	CCDC12	83	71.852	ENSCVAG00000011342	ccdc12	99	71.852	Cyprinodon_variegatus
ENSFALG00000001895	CCDC12	98	62.893	ENSDARG00000023003	ccdc12	96	62.893	Danio_rerio
ENSFALG00000001895	CCDC12	75	75.410	ENSDORG00000016567	-	79	71.970	Dipodomys_ordii
ENSFALG00000001895	CCDC12	67	66.972	ENSDORG00000024399	-	78	65.152	Dipodomys_ordii
ENSFALG00000001895	CCDC12	80	45.113	FBgn0039732	CG15525	75	45.113	Drosophila_melanogaster
ENSFALG00000001895	CCDC12	64	59.048	ENSETEG00000000030	CCDC12	91	60.000	Echinops_telfairi
ENSFALG00000001895	CCDC12	66	67.593	ENSEBUG00000005674	ccdc12	67	67.593	Eptatretus_burgeri
ENSFALG00000001895	CCDC12	77	76.000	ENSEASG00005008148	-	51	76.000	Equus_asinus_asinus
ENSFALG00000001895	CCDC12	98	59.119	ENSECAG00000008649	CCDC12	94	59.119	Equus_caballus
ENSFALG00000001895	CCDC12	98	61.006	ENSELUG00000024105	ccdc12	91	71.930	Esox_lucius
ENSFALG00000001895	CCDC12	98	64.151	ENSFCAG00000015474	CCDC12	94	64.151	Felis_catus
ENSFALG00000001895	CCDC12	98	64.151	ENSFDAG00000002549	CCDC12	95	64.780	Fukomys_damarensis
ENSFALG00000001895	CCDC12	100	61.446	ENSFHEG00000016247	ccdc12	93	61.446	Fundulus_heteroclitus
ENSFALG00000001895	CCDC12	69	78.571	ENSGMOG00000016901	ccdc12	67	78.571	Gadus_morhua
ENSFALG00000001895	CCDC12	88	65.734	ENSGAFG00000006762	ccdc12	96	67.969	Gambusia_affinis
ENSFALG00000001895	CCDC12	100	63.855	ENSGACG00000008629	ccdc12	100	63.855	Gasterosteus_aculeatus
ENSFALG00000001895	CCDC12	94	72.727	ENSGAGG00000019688	CCDC12	91	72.727	Gopherus_agassizii
ENSFALG00000001895	CCDC12	84	70.803	ENSGGOG00000009012	CCDC12	75	71.533	Gorilla_gorilla
ENSFALG00000001895	CCDC12	98	62.893	ENSHBUG00000016447	ccdc12	96	62.893	Haplochromis_burtoni
ENSFALG00000001895	CCDC12	98	64.151	ENSHGLG00000014058	CCDC12	94	64.780	Heterocephalus_glaber_female
ENSFALG00000001895	CCDC12	98	64.151	ENSHGLG00100005918	CCDC12	94	64.780	Heterocephalus_glaber_male
ENSFALG00000001895	CCDC12	93	60.265	ENSHCOG00000015164	ccdc12	91	60.265	Hippocampus_comes
ENSFALG00000001895	CCDC12	77	72.000	ENSIPUG00000001310	Ccdc12	75	72.000	Ictalurus_punctatus
ENSFALG00000001895	CCDC12	98	64.151	ENSSTOG00000003085	CCDC12	94	64.780	Ictidomys_tridecemlineatus
ENSFALG00000001895	CCDC12	98	63.522	ENSJJAG00000014918	Ccdc12	94	64.151	Jaculus_jaculus
ENSFALG00000001895	CCDC12	98	60.248	ENSKMAG00000013891	ccdc12	96	60.248	Kryptolebias_marmoratus
ENSFALG00000001895	CCDC12	82	70.896	ENSLBEG00000024714	ccdc12	70	70.896	Labrus_bergylta
ENSFALG00000001895	CCDC12	98	66.038	ENSLOCG00000005683	ccdc12	88	66.038	Lepisosteus_oculatus
ENSFALG00000001895	CCDC12	70	74.561	ENSLAFG00000022573	-	99	74.561	Loxodonta_africana
ENSFALG00000001895	CCDC12	95	62.581	ENSLAFG00000027745	-	97	63.226	Loxodonta_africana
ENSFALG00000001895	CCDC12	98	64.780	ENSMFAG00000002976	CCDC12	75	70.803	Macaca_fascicularis
ENSFALG00000001895	CCDC12	98	64.780	ENSMMUG00000019810	CCDC12	75	70.803	Macaca_mulatta
ENSFALG00000001895	CCDC12	98	64.780	ENSMNEG00000035785	CCDC12	75	70.803	Macaca_nemestrina
ENSFALG00000001895	CCDC12	98	64.780	ENSMLEG00000038060	CCDC12	75	70.803	Mandrillus_leucophaeus
ENSFALG00000001895	CCDC12	88	65.734	ENSMAMG00000012165	ccdc12	83	77.477	Mastacembelus_armatus
ENSFALG00000001895	CCDC12	93	55.844	ENSMZEG00005019013	-	92	55.844	Maylandia_zebra
ENSFALG00000001895	CCDC12	98	62.893	ENSMZEG00005014728	ccdc12	96	62.893	Maylandia_zebra
ENSFALG00000001895	CCDC12	82	83.459	ENSMGAG00000002815	CCDC12	75	83.459	Meleagris_gallopavo
ENSFALG00000001895	CCDC12	98	62.893	ENSMAUG00000008879	Ccdc12	94	62.893	Mesocricetus_auratus
ENSFALG00000001895	CCDC12	98	63.522	ENSMICG00000032886	CCDC12	94	63.522	Microcebus_murinus
ENSFALG00000001895	CCDC12	98	62.893	ENSMOCG00000004483	Ccdc12	94	62.893	Microtus_ochrogaster
ENSFALG00000001895	CCDC12	64	77.885	ENSMMOG00000001860	ccdc12	71	77.885	Mola_mola
ENSFALG00000001895	CCDC12	76	66.935	ENSMODG00000025021	-	76	66.935	Monodelphis_domestica
ENSFALG00000001895	CCDC12	90	67.347	ENSMODG00000013967	-	76	75.200	Monodelphis_domestica
ENSFALG00000001895	CCDC12	76	66.129	ENSMODG00000022615	-	76	66.129	Monodelphis_domestica
ENSFALG00000001895	CCDC12	100	60.241	ENSMALG00000011850	ccdc12	100	60.241	Monopterus_albus
ENSFALG00000001895	CCDC12	98	63.522	MGP_CAROLIEiJ_G0032737	-	76	87.097	Mus_caroli
ENSFALG00000001895	CCDC12	98	62.893	ENSMUSG00000019659	Ccdc12	70	87.097	Mus_musculus
ENSFALG00000001895	CCDC12	98	63.522	MGP_PahariEiJ_G0015604	Ccdc12	94	63.522	Mus_pahari
ENSFALG00000001895	CCDC12	98	62.893	MGP_SPRETEiJ_G0033885	Ccdc12	71	87.097	Mus_spretus
ENSFALG00000001895	CCDC12	98	58.491	ENSMLUG00000009547	CCDC12	86	69.231	Myotis_lucifugus
ENSFALG00000001895	CCDC12	68	73.874	ENSNGAG00000004149	Ccdc12	81	70.803	Nannospalax_galili
ENSFALG00000001895	CCDC12	69	75.893	ENSNBRG00000015275	ccdc12	69	75.893	Neolamprologus_brichardi
ENSFALG00000001895	CCDC12	84	70.803	ENSNLEG00000006219	CCDC12	81	71.533	Nomascus_leucogenys
ENSFALG00000001895	CCDC12	78	71.654	ENSOPRG00000005086	CCDC12	76	71.654	Ochotona_princeps
ENSFALG00000001895	CCDC12	98	64.780	ENSODEG00000012202	CCDC12	94	64.780	Octodon_degus
ENSFALG00000001895	CCDC12	98	62.893	ENSONIG00000003061	ccdc12	96	62.893	Oreochromis_niloticus
ENSFALG00000001895	CCDC12	78	76.562	ENSOANG00000004263	-	95	76.562	Ornithorhynchus_anatinus
ENSFALG00000001895	CCDC12	84	70.803	ENSOCUG00000012431	CCDC12	69	71.533	Oryctolagus_cuniculus
ENSFALG00000001895	CCDC12	97	58.228	ENSORLG00000008126	ccdc12	95	58.228	Oryzias_latipes
ENSFALG00000001895	CCDC12	98	63.522	ENSORLG00020013927	ccdc12	96	63.522	Oryzias_latipes_hni
ENSFALG00000001895	CCDC12	98	63.522	ENSORLG00015020115	ccdc12	96	63.522	Oryzias_latipes_hsok
ENSFALG00000001895	CCDC12	98	63.522	ENSOMEG00000022304	ccdc12	96	63.522	Oryzias_melastigma
ENSFALG00000001895	CCDC12	98	63.522	ENSOMEG00000014082	ccdc12	96	63.522	Oryzias_melastigma
ENSFALG00000001895	CCDC12	69	71.681	ENSOGAG00000016807	CCDC12	100	71.681	Otolemur_garnettii
ENSFALG00000001895	CCDC12	74	76.860	ENSOARG00000006426	CCDC12	94	74.809	Ovis_aries
ENSFALG00000001895	CCDC12	84	70.803	ENSPPAG00000028782	CCDC12	75	70.803	Pan_paniscus
ENSFALG00000001895	CCDC12	98	64.151	ENSPPRG00000013547	CCDC12	94	64.151	Panthera_pardus
ENSFALG00000001895	CCDC12	98	64.151	ENSPTIG00000014875	CCDC12	90	64.151	Panthera_tigris_altaica
ENSFALG00000001895	CCDC12	84	70.803	ENSPTRG00000014862	CCDC12	75	71.533	Pan_troglodytes
ENSFALG00000001895	CCDC12	98	64.780	ENSPANG00000017485	CCDC12	89	64.780	Papio_anubis
ENSFALG00000001895	CCDC12	98	62.264	ENSPKIG00000019130	ccdc12	96	62.264	Paramormyrops_kingsleyae
ENSFALG00000001895	CCDC12	69	84.071	ENSPSIG00000010867	CCDC12	100	84.071	Pelodiscus_sinensis
ENSFALG00000001895	CCDC12	98	64.151	ENSPMGG00000012211	ccdc12	96	64.151	Periophthalmus_magnuspinnatus
ENSFALG00000001895	CCDC12	98	62.893	ENSPEMG00000022196	-	94	62.893	Peromyscus_maniculatus_bairdii
ENSFALG00000001895	CCDC12	97	50.932	ENSPEMG00000001376	-	97	50.932	Peromyscus_maniculatus_bairdii
ENSFALG00000001895	CCDC12	93	59.868	ENSPMAG00000000005	ccdc12	88	59.868	Petromyzon_marinus
ENSFALG00000001895	CCDC12	90	69.178	ENSPCIG00000025941	CCDC12	89	69.863	Phascolarctos_cinereus
ENSFALG00000001895	CCDC12	85	65.217	ENSPFOG00000000343	ccdc12	96	64.151	Poecilia_formosa
ENSFALG00000001895	CCDC12	98	63.522	ENSPLAG00000019010	ccdc12	96	63.522	Poecilia_latipinna
ENSFALG00000001895	CCDC12	85	65.217	ENSPMEG00000022371	ccdc12	77	64.151	Poecilia_mexicana
ENSFALG00000001895	CCDC12	98	63.522	ENSPREG00000020932	ccdc12	77	63.522	Poecilia_reticulata
ENSFALG00000001895	CCDC12	84	70.803	ENSPPYG00000013924	CCDC12	67	71.533	Pongo_abelii
ENSFALG00000001895	CCDC12	81	71.970	ENSPCAG00000005800	CCDC12	79	71.970	Procavia_capensis
ENSFALG00000001895	CCDC12	98	64.780	ENSPCOG00000018682	CCDC12	76	70.803	Propithecus_coquereli
ENSFALG00000001895	CCDC12	98	63.522	ENSPVAG00000004204	CCDC12	94	63.522	Pteropus_vampyrus
ENSFALG00000001895	CCDC12	98	62.893	ENSPNYG00000016295	ccdc12	96	62.893	Pundamilia_nyererei
ENSFALG00000001895	CCDC12	98	50.625	ENSPNAG00000028558	ccdc12	90	75.439	Pygocentrus_nattereri
ENSFALG00000001895	CCDC12	98	63.522	ENSRNOG00000020946	Ccdc12	94	63.522	Rattus_norvegicus
ENSFALG00000001895	CCDC12	84	70.073	ENSRBIG00000039910	CCDC12	75	70.803	Rhinopithecus_bieti
ENSFALG00000001895	CCDC12	98	64.151	ENSRROG00000039721	CCDC12	94	64.780	Rhinopithecus_roxellana
ENSFALG00000001895	CCDC12	98	64.780	ENSSBOG00000035443	CCDC12	87	65.409	Saimiri_boliviensis_boliviensis
ENSFALG00000001895	CCDC12	90	69.178	ENSSHAG00000003265	-	89	69.178	Sarcophilus_harrisii
ENSFALG00000001895	CCDC12	98	60.377	ENSSFOG00015001307	ccdc12	96	60.377	Scleropages_formosus
ENSFALG00000001895	CCDC12	100	62.048	ENSSMAG00000019856	ccdc12	100	62.048	Scophthalmus_maximus
ENSFALG00000001895	CCDC12	98	62.893	ENSSDUG00000006549	ccdc12	96	62.893	Seriola_dumerili
ENSFALG00000001895	CCDC12	100	62.048	ENSSLDG00000015956	ccdc12	100	62.048	Seriola_lalandi_dorsalis
ENSFALG00000001895	CCDC12	92	50.658	ENSSPUG00000013054	CCDC12	89	50.658	Sphenodon_punctatus
ENSFALG00000001895	CCDC12	98	63.522	ENSSPAG00000007010	ccdc12	96	63.522	Stegastes_partitus
ENSFALG00000001895	CCDC12	63	53.398	ENSSSCG00000007882	-	70	53.398	Sus_scrofa
ENSFALG00000001895	CCDC12	92	66.667	ENSSSCG00000011329	-	89	66.667	Sus_scrofa
ENSFALG00000001895	CCDC12	60	83.505	ENSTGUG00000000186	CCDC12	78	83.505	Taeniopygia_guttata
ENSFALG00000001895	CCDC12	69	75.893	ENSTRUG00000014023	ccdc12	61	75.893	Takifugu_rubripes
ENSFALG00000001895	CCDC12	81	68.939	ENSTNIG00000018407	ccdc12	78	68.939	Tetraodon_nigroviridis
ENSFALG00000001895	CCDC12	81	45.455	ENSTBEG00000000048	CCDC12	77	45.455	Tupaia_belangeri
ENSFALG00000001895	CCDC12	71	75.862	ENSTTRG00000015854	CCDC12	71	75.207	Tursiops_truncatus
ENSFALG00000001895	CCDC12	80	67.939	ENSUAMG00000025548	CCDC12	90	67.939	Ursus_americanus
ENSFALG00000001895	CCDC12	98	64.780	ENSUMAG00000004346	CCDC12	94	64.780	Ursus_maritimus
ENSFALG00000001895	CCDC12	98	64.780	ENSVVUG00000004582	CCDC12	94	64.780	Vulpes_vulpes
ENSFALG00000001895	CCDC12	79	76.744	ENSXETG00000013123	ccdc12	94	76.744	Xenopus_tropicalis
ENSFALG00000001895	CCDC12	98	63.522	ENSXCOG00000019741	ccdc12	96	63.522	Xiphophorus_couchianus
ENSFALG00000001895	CCDC12	91	67.114	ENSXMAG00000014098	ccdc12	70	67.114	Xiphophorus_maculatus