EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000001912 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 23438 bases
Position: chrJH603242.1:3333553-3356990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000001987	PRP4	PF08799.11	1.1e-13	1	1
ENSFALP00000001987	Prp18	PF02840.15	4.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000001999	-	1085	-	ENSFALP00000001987	334 (aa)	-	U3JGT3

Gene Model

Click here to download ENSFALG00000001912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000001912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000001912	-	97	89.231	ENSG00000165630	PRPF18	98	91.770	Homo_sapiens
ENSFALG00000001912	-	97	81.231	ENSAPOG00000024177	prpf18	93	80.923	Acanthochromis_polyacanthus
ENSFALG00000001912	-	97	88.615	ENSAMEG00000013591	-	92	87.768	Ailuropoda_melanoleuca
ENSFALG00000001912	-	97	80.615	ENSACIG00000001186	prpf18	92	80.308	Amphilophus_citrinellus
ENSFALG00000001912	-	97	81.231	ENSAOCG00000006572	prpf18	89	80.923	Amphiprion_ocellaris
ENSFALG00000001912	-	97	81.231	ENSAPEG00000004564	prpf18	93	80.923	Amphiprion_percula
ENSFALG00000001912	-	97	79.385	ENSATEG00000000303	prpf18	92	79.077	Anabas_testudineus
ENSFALG00000001912	-	97	94.118	ENSAPLG00000003387	-	92	94.118	Anas_platyrhynchos
ENSFALG00000001912	-	97	91.437	ENSACAG00000000818	-	93	91.131	Anolis_carolinensis
ENSFALG00000001912	-	98	91.131	ENSANAG00000037445	-	97	91.131	Aotus_nancymaae
ENSFALG00000001912	-	99	78.979	ENSACLG00000026296	prpf18	97	78.679	Astatotilapia_calliptera
ENSFALG00000001912	-	98	82.012	ENSAMXG00000012848	prpf18	93	82.462	Astyanax_mexicanus
ENSFALG00000001912	-	97	90.462	ENSBTAG00000017244	PRPF18	93	90.462	Bos_taurus
ENSFALG00000001912	-	96	36.086	WBGene00009320	F32B6.3	90	35.185	Caenorhabditis_elegans
ENSFALG00000001912	-	98	91.104	ENSCJAG00000009432	-	95	91.104	Callithrix_jacchus
ENSFALG00000001912	-	97	88.615	ENSCAFG00000004735	-	92	87.768	Canis_familiaris
ENSFALG00000001912	-	98	87.805	ENSCAFG00020007712	-	92	87.768	Canis_lupus_dingo
ENSFALG00000001912	-	97	90.462	ENSCHIG00000000499	-	93	90.462	Capra_hircus
ENSFALG00000001912	-	97	90.462	ENSTSYG00000003517	-	93	90.462	Carlito_syrichta
ENSFALG00000001912	-	97	91.077	ENSCPOG00000021069	-	93	91.077	Cavia_porcellus
ENSFALG00000001912	-	98	91.131	ENSCCAG00000036822	-	97	91.131	Cebus_capucinus
ENSFALG00000001912	-	97	77.846	ENSCATG00000016633	-	91	77.064	Cercocebus_atys
ENSFALG00000001912	-	97	90.462	ENSCLAG00000011770	-	93	90.462	Chinchilla_lanigera
ENSFALG00000001912	-	97	91.385	ENSCSAG00000013109	-	93	91.385	Chlorocebus_sabaeus
ENSFALG00000001912	-	97	89.971	ENSCPBG00000003100	-	93	90.560	Chrysemys_picta_bellii
ENSFALG00000001912	-	97	53.251	ENSCING00000020481	-	90	51.515	Ciona_intestinalis
ENSFALG00000001912	-	97	52.941	ENSCSAVG00000010546	-	91	51.829	Ciona_savignyi
ENSFALG00000001912	-	97	91.077	ENSCANG00000034900	-	93	91.077	Colobus_angolensis_palliatus
ENSFALG00000001912	-	97	89.231	ENSCGRG00001023665	Prpf18	92	89.231	Cricetulus_griseus_chok1gshd
ENSFALG00000001912	-	97	89.231	ENSCGRG00000014690	Prpf18	92	89.231	Cricetulus_griseus_crigri
ENSFALG00000001912	-	97	78.769	ENSCSEG00000005536	prpf18	92	78.769	Cynoglossus_semilaevis
ENSFALG00000001912	-	97	79.692	ENSCVAG00000012401	prpf18	93	79.385	Cyprinodon_variegatus
ENSFALG00000001912	-	97	82.209	ENSDARG00000058306	prpf18	93	82.154	Danio_rerio
ENSFALG00000001912	-	97	88.923	ENSDNOG00000035607	-	92	88.073	Dasypus_novemcinctus
ENSFALG00000001912	-	97	88.308	ENSDORG00000000858	Prpf18	92	87.462	Dipodomys_ordii
ENSFALG00000001912	-	97	47.385	FBgn0027784	Prp18	91	47.385	Drosophila_melanogaster
ENSFALG00000001912	-	95	81.073	ENSETEG00000015060	-	90	80.564	Echinops_telfairi
ENSFALG00000001912	-	98	65.031	ENSEBUG00000016502	prpf18	92	64.615	Eptatretus_burgeri
ENSFALG00000001912	-	97	91.077	ENSEASG00005019373	-	93	91.077	Equus_asinus_asinus
ENSFALG00000001912	-	97	91.077	ENSECAG00000006997	PRPF18	93	91.077	Equus_caballus
ENSFALG00000001912	-	97	56.000	ENSEEUG00000001171	-	100	55.352	Erinaceus_europaeus
ENSFALG00000001912	-	97	78.221	ENSELUG00000022190	prpf18	93	78.221	Esox_lucius
ENSFALG00000001912	-	97	90.769	ENSFCAG00000004436	-	93	90.769	Felis_catus
ENSFALG00000001912	-	90	91.391	ENSFDAG00000014026	-	92	90.461	Fukomys_damarensis
ENSFALG00000001912	-	97	59.259	ENSFDAG00000010713	-	88	58.951	Fukomys_damarensis
ENSFALG00000001912	-	74	87.449	ENSFHEG00000020125	prpf18	88	87.552	Fundulus_heteroclitus
ENSFALG00000001912	-	97	76.923	ENSGMOG00000012210	prpf18	92	76.615	Gadus_morhua
ENSFALG00000001912	-	97	98.154	ENSGALG00000043593	-	93	98.154	Gallus_gallus
ENSFALG00000001912	-	97	79.077	ENSGAFG00000006034	prpf18	92	78.769	Gambusia_affinis
ENSFALG00000001912	-	97	76.615	ENSGACG00000012232	prpf18	92	76.615	Gasterosteus_aculeatus
ENSFALG00000001912	-	97	93.846	ENSGAGG00000016878	-	93	93.846	Gopherus_agassizii
ENSFALG00000001912	-	98	90.854	ENSGGOG00000025188	-	97	90.854	Gorilla_gorilla
ENSFALG00000001912	-	97	80.308	ENSHBUG00000010264	prpf18	93	80.000	Haplochromis_burtoni
ENSFALG00000001912	-	97	88.615	ENSHGLG00000018534	PRPF18	92	87.768	Heterocephalus_glaber_female
ENSFALG00000001912	-	90	91.060	ENSHGLG00100012161	-	90	90.132	Heterocephalus_glaber_male
ENSFALG00000001912	-	97	80.308	ENSHCOG00000015987	prpf18	93	80.000	Hippocampus_comes
ENSFALG00000001912	-	97	81.957	ENSIPUG00000007432	prpf18	93	82.263	Ictalurus_punctatus
ENSFALG00000001912	-	97	90.462	ENSSTOG00000008735	-	93	90.462	Ictidomys_tridecemlineatus
ENSFALG00000001912	-	97	89.231	ENSJJAG00000024041	-	92	88.379	Jaculus_jaculus
ENSFALG00000001912	-	97	62.727	ENSJJAG00000015191	-	91	62.883	Jaculus_jaculus
ENSFALG00000001912	-	97	80.000	ENSKMAG00000012124	prpf18	93	79.692	Kryptolebias_marmoratus
ENSFALG00000001912	-	95	78.165	ENSLBEG00000028466	prpf18	90	77.848	Labrus_bergylta
ENSFALG00000001912	-	97	85.231	ENSLACG00000009885	prpf18	93	85.231	Latimeria_chalumnae
ENSFALG00000001912	-	97	87.692	ENSLOCG00000016736	prpf18	93	87.692	Lepisosteus_oculatus
ENSFALG00000001912	-	97	89.231	ENSLAFG00000007753	-	92	88.379	Loxodonta_africana
ENSFALG00000001912	-	98	90.549	ENSMFAG00000000540	-	98	90.549	Macaca_fascicularis
ENSFALG00000001912	-	98	90.549	ENSMMUG00000015071	PRPF18	98	90.549	Macaca_mulatta
ENSFALG00000001912	-	98	90.549	ENSMNEG00000024679	-	98	90.549	Macaca_nemestrina
ENSFALG00000001912	-	82	86.861	ENSMLEG00000031715	-	91	85.870	Mandrillus_leucophaeus
ENSFALG00000001912	-	97	80.308	ENSMAMG00000006610	prpf18	93	80.000	Mastacembelus_armatus
ENSFALG00000001912	-	97	80.308	ENSMZEG00005019392	prpf18	93	80.000	Maylandia_zebra
ENSFALG00000001912	-	97	95.385	ENSMGAG00000005023	-	92	95.385	Meleagris_gallopavo
ENSFALG00000001912	-	97	91.077	ENSMICG00000006572	-	96	91.077	Microcebus_murinus
ENSFALG00000001912	-	97	89.231	ENSMOCG00000021468	Prpf18	92	88.379	Microtus_ochrogaster
ENSFALG00000001912	-	97	79.692	ENSMMOG00000013012	prpf18	92	79.385	Mola_mola
ENSFALG00000001912	-	97	92.615	ENSMODG00000016902	-	91	92.615	Monodelphis_domestica
ENSFALG00000001912	-	97	78.154	ENSMODG00000024043	-	92	78.154	Monodelphis_domestica
ENSFALG00000001912	-	97	72.923	ENSMALG00000005486	prpf18	92	72.561	Monopterus_albus
ENSFALG00000001912	-	97	88.615	MGP_CAROLIEiJ_G0023143	Prpf18	100	97.260	Mus_caroli
ENSFALG00000001912	-	97	88.308	ENSMUSG00000039449	Prpf18	100	97.260	Mus_musculus
ENSFALG00000001912	-	97	88.923	MGP_PahariEiJ_G0019203	Prpf18	100	97.260	Mus_pahari
ENSFALG00000001912	-	97	88.000	MGP_SPRETEiJ_G0024061	Prpf18	100	97.260	Mus_spretus
ENSFALG00000001912	-	97	88.308	ENSMPUG00000000938	-	92	87.462	Mustela_putorius_furo
ENSFALG00000001912	-	97	88.308	ENSMLUG00000009200	-	92	88.308	Myotis_lucifugus
ENSFALG00000001912	-	61	88.235	ENSNGAG00000023550	-	73	88.235	Nannospalax_galili
ENSFALG00000001912	-	97	88.615	ENSNGAG00000012500	-	92	87.768	Nannospalax_galili
ENSFALG00000001912	-	97	79.385	ENSNBRG00000001778	prpf18	92	79.385	Neolamprologus_brichardi
ENSFALG00000001912	-	97	91.385	ENSNLEG00000012186	-	93	91.385	Nomascus_leucogenys
ENSFALG00000001912	-	68	77.876	ENSMEUG00000005032	-	65	77.876	Notamacropus_eugenii
ENSFALG00000001912	-	82	70.803	ENSOPRG00000002153	-	100	69.928	Ochotona_princeps
ENSFALG00000001912	-	97	88.923	ENSODEG00000003770	-	92	88.073	Octodon_degus
ENSFALG00000001912	-	97	79.385	ENSONIG00000014854	prpf18	90	79.385	Oreochromis_niloticus
ENSFALG00000001912	-	97	91.077	ENSOANG00000015404	-	93	91.077	Ornithorhynchus_anatinus
ENSFALG00000001912	-	97	88.923	ENSOCUG00000027756	-	88	88.782	Oryctolagus_cuniculus
ENSFALG00000001912	-	99	78.182	ENSORLG00000010293	prpf18	93	79.692	Oryzias_latipes
ENSFALG00000001912	-	97	80.000	ENSORLG00020001530	prpf18	93	79.692	Oryzias_latipes_hni
ENSFALG00000001912	-	97	79.692	ENSORLG00015013705	prpf18	93	79.385	Oryzias_latipes_hsok
ENSFALG00000001912	-	97	80.615	ENSOMEG00000009167	prpf18	92	80.615	Oryzias_melastigma
ENSFALG00000001912	-	97	88.308	ENSOGAG00000007294	-	92	87.462	Otolemur_garnettii
ENSFALG00000001912	-	97	90.462	ENSOARG00000006243	-	93	90.462	Ovis_aries
ENSFALG00000001912	-	97	91.385	ENSPPAG00000041959	-	93	91.385	Pan_paniscus
ENSFALG00000001912	-	97	88.615	ENSPPRG00000000107	-	92	87.768	Panthera_pardus
ENSFALG00000001912	-	97	88.923	ENSPTIG00000021094	-	92	88.073	Panthera_tigris_altaica
ENSFALG00000001912	-	97	91.385	ENSPTRG00000002306	PRPF18	93	91.385	Pan_troglodytes
ENSFALG00000001912	-	97	91.077	ENSPANG00000023346	-	93	91.077	Papio_anubis
ENSFALG00000001912	-	91	96.296	ENSPKIG00000014128	prpf18	89	82.154	Paramormyrops_kingsleyae
ENSFALG00000001912	-	97	91.692	ENSPSIG00000016064	-	92	91.692	Pelodiscus_sinensis
ENSFALG00000001912	-	97	75.077	ENSPMGG00000016486	prpf18	92	74.006	Periophthalmus_magnuspinnatus
ENSFALG00000001912	-	97	88.923	ENSPEMG00000013704	Prpf18	92	88.923	Peromyscus_maniculatus_bairdii
ENSFALG00000001912	-	97	73.846	ENSPMAG00000000204	prpf18	92	73.538	Petromyzon_marinus
ENSFALG00000001912	-	98	91.463	ENSPCIG00000012963	-	99	91.463	Phascolarctos_cinereus
ENSFALG00000001912	-	97	79.385	ENSPFOG00000017611	prpf18	93	79.077	Poecilia_formosa
ENSFALG00000001912	-	97	78.462	ENSPLAG00000000369	prpf18	92	78.462	Poecilia_latipinna
ENSFALG00000001912	-	97	79.385	ENSPMEG00000005183	prpf18	93	79.077	Poecilia_mexicana
ENSFALG00000001912	-	97	78.769	ENSPREG00000015232	prpf18	92	78.769	Poecilia_reticulata
ENSFALG00000001912	-	97	88.923	ENSPPYG00000002101	PRPF18	92	88.073	Pongo_abelii
ENSFALG00000001912	-	97	71.077	ENSPCAG00000010833	-	93	70.336	Procavia_capensis
ENSFALG00000001912	-	97	81.846	ENSPCOG00000013057	-	92	81.846	Propithecus_coquereli
ENSFALG00000001912	-	88	56.463	ENSPVAG00000002947	-	83	56.463	Pteropus_vampyrus
ENSFALG00000001912	-	97	80.000	ENSPNYG00000003554	prpf18	93	79.692	Pundamilia_nyererei
ENSFALG00000001912	-	97	83.692	ENSPNAG00000023151	prpf18	93	83.692	Pygocentrus_nattereri
ENSFALG00000001912	-	100	88.623	ENSRNOG00000018396	Prpf18	96	88.623	Rattus_norvegicus
ENSFALG00000001912	-	97	90.769	ENSRBIG00000028028	-	93	90.769	Rhinopithecus_bieti
ENSFALG00000001912	-	97	91.077	ENSRROG00000040695	-	93	91.077	Rhinopithecus_roxellana
ENSFALG00000001912	-	98	91.131	ENSSBOG00000034482	-	97	91.131	Saimiri_boliviensis_boliviensis
ENSFALG00000001912	-	97	73.231	ENSSHAG00000009669	-	92	71.385	Sarcophilus_harrisii
ENSFALG00000001912	-	97	90.154	ENSSHAG00000016463	-	92	88.991	Sarcophilus_harrisii
ENSFALG00000001912	-	72	47.325	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSFALG00000001912	-	97	83.077	ENSSFOG00015022118	prpf18	92	74.242	Scleropages_formosus
ENSFALG00000001912	-	97	78.462	ENSSMAG00000005308	prpf18	93	78.154	Scophthalmus_maximus
ENSFALG00000001912	-	97	80.308	ENSSDUG00000015428	prpf18	93	80.000	Seriola_dumerili
ENSFALG00000001912	-	97	80.308	ENSSLDG00000023989	prpf18	93	80.000	Seriola_lalandi_dorsalis
ENSFALG00000001912	-	82	69.597	ENSSARG00000005307	-	77	68.727	Sorex_araneus
ENSFALG00000001912	-	97	90.462	ENSSPUG00000002619	-	92	90.154	Sphenodon_punctatus
ENSFALG00000001912	-	97	80.308	ENSSPAG00000019502	prpf18	93	80.000	Stegastes_partitus
ENSFALG00000001912	-	97	90.769	ENSSSCG00000026354	-	93	90.769	Sus_scrofa
ENSFALG00000001912	-	97	97.231	ENSTGUG00000002286	-	92	97.231	Taeniopygia_guttata
ENSFALG00000001912	-	97	80.000	ENSTRUG00000011278	prpf18	92	79.692	Takifugu_rubripes
ENSFALG00000001912	-	97	80.923	ENSTNIG00000000911	prpf18	92	80.308	Tetraodon_nigroviridis
ENSFALG00000001912	-	76	100.000	ENSTBEG00000013011	-	72	100.000	Tupaia_belangeri
ENSFALG00000001912	-	97	89.538	ENSTTRG00000011117	PRPF18	92	88.685	Tursiops_truncatus
ENSFALG00000001912	-	88	90.816	ENSUAMG00000001815	-	85	89.865	Ursus_americanus
ENSFALG00000001912	-	97	83.692	ENSUMAG00000012329	-	92	82.875	Ursus_maritimus
ENSFALG00000001912	-	97	82.769	ENSVPAG00000011486	-	92	81.957	Vicugna_pacos
ENSFALG00000001912	-	97	90.769	ENSVVUG00000005453	-	93	90.769	Vulpes_vulpes
ENSFALG00000001912	-	97	78.049	ENSXETG00000024057	prpf18	92	77.846	Xenopus_tropicalis
ENSFALG00000001912	-	97	77.982	ENSXCOG00000020414	prpf18	92	77.676	Xiphophorus_couchianus
ENSFALG00000001912	-	97	79.385	ENSXMAG00000004713	prpf18	84	79.077	Xiphophorus_maculatus