EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002024 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 18821 bases
Position: chrJH603313.1:656920-675740
Accession: 101821163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002104	Nop52	PF05997.12	2.3e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002116	RRP1B-201	5769	XM_005037221	ENSFALP00000002104	689 (aa)	XP_005037278	U3JH50

Gene Model

Click here to download ENSFALG00000002024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002024	RRP1B	100	45.330	ENSG00000160208	RRP1B	92	45.205	Homo_sapiens
ENSFALG00000002024	RRP1B	60	47.157	ENSAPOG00000007490	-	51	47.387	Acanthochromis_polyacanthus
ENSFALG00000002024	RRP1B	84	56.075	ENSAMEG00000011401	RRP1B	76	58.781	Ailuropoda_melanoleuca
ENSFALG00000002024	RRP1B	53	51.316	ENSAOCG00000017894	-	84	51.579	Amphiprion_ocellaris
ENSFALG00000002024	RRP1B	61	46.273	ENSATEG00000005045	-	58	47.195	Anabas_testudineus
ENSFALG00000002024	RRP1B	100	73.851	ENSAPLG00000004310	RRP1B	97	74.569	Anas_platyrhynchos
ENSFALG00000002024	RRP1B	100	50.070	ENSACAG00000017851	RRP1B	87	50.562	Anolis_carolinensis
ENSFALG00000002024	RRP1B	100	44.278	ENSANAG00000034889	RRP1B	92	44.278	Aotus_nancymaae
ENSFALG00000002024	RRP1B	100	42.562	ENSBTAG00000017418	RRP1B	97	41.597	Bos_taurus
ENSFALG00000002024	RRP1B	100	43.732	ENSCAFG00020018901	RRP1B	92	44.585	Canis_lupus_dingo
ENSFALG00000002024	RRP1B	100	43.333	ENSCHIG00000021519	RRP1B	92	44.321	Capra_hircus
ENSFALG00000002024	RRP1B	52	50.411	ENSCCAG00000029828	RRP1	62	57.895	Cebus_capucinus
ENSFALG00000002024	RRP1B	100	45.267	ENSCATG00000017423	RRP1B	92	45.267	Cercocebus_atys
ENSFALG00000002024	RRP1B	55	45.897	ENSCLAG00000011639	RRP1	62	54.448	Chinchilla_lanigera
ENSFALG00000002024	RRP1B	100	63.128	ENSCPBG00000010310	RRP1B	96	63.845	Chrysemys_picta_bellii
ENSFALG00000002024	RRP1B	55	30.390	ENSCING00000003304	-	59	31.317	Ciona_intestinalis
ENSFALG00000002024	RRP1B	100	45.332	ENSCANG00000040952	RRP1B	92	45.714	Colobus_angolensis_palliatus
ENSFALG00000002024	RRP1B	100	41.656	ENSCGRG00001010889	-	92	41.522	Cricetulus_griseus_chok1gshd
ENSFALG00000002024	RRP1B	100	41.656	ENSCGRG00001023882	-	92	41.389	Cricetulus_griseus_chok1gshd
ENSFALG00000002024	RRP1B	100	41.656	ENSCGRG00000001553	Rrp1b	95	41.522	Cricetulus_griseus_crigri
ENSFALG00000002024	RRP1B	56	54.717	ENSCSEG00000020711	-	67	54.286	Cynoglossus_semilaevis
ENSFALG00000002024	RRP1B	53	50.674	ENSDNOG00000019880	RRP1	63	60.284	Dasypus_novemcinctus
ENSFALG00000002024	RRP1B	100	43.601	ENSDNOG00000032774	RRP1B	92	45.404	Dasypus_novemcinctus
ENSFALG00000002024	RRP1B	74	51.097	ENSETEG00000019489	RRP1B	92	39.862	Echinops_telfairi
ENSFALG00000002024	RRP1B	100	45.957	ENSEASG00005001687	RRP1B	92	45.957	Equus_asinus_asinus
ENSFALG00000002024	RRP1B	60	52.893	ENSELUG00000015885	-	71	48.496	Esox_lucius
ENSFALG00000002024	RRP1B	100	42.441	ENSFDAG00000010899	RRP1B	92	41.370	Fukomys_damarensis
ENSFALG00000002024	RRP1B	55	45.119	ENSFDAG00000013728	RRP1	62	55.556	Fukomys_damarensis
ENSFALG00000002024	RRP1B	60	47.826	ENSGMOG00000001953	-	56	47.826	Gadus_morhua
ENSFALG00000002024	RRP1B	100	73.563	ENSGALG00000035696	RRP1B	92	73.851	Gallus_gallus
ENSFALG00000002024	RRP1B	65	47.492	ENSGACG00000001438	rrp1	66	46.786	Gasterosteus_aculeatus
ENSFALG00000002024	RRP1B	100	61.119	ENSGAGG00000000375	RRP1B	92	62.410	Gopherus_agassizii
ENSFALG00000002024	RRP1B	76	51.815	ENSHGLG00100002232	RRP1B	76	53.903	Heterocephalus_glaber_male
ENSFALG00000002024	RRP1B	63	42.899	ENSHCOG00000018388	-	53	41.718	Hippocampus_comes
ENSFALG00000002024	RRP1B	58	46.602	ENSIPUG00000000673	-	56	47.619	Ictalurus_punctatus
ENSFALG00000002024	RRP1B	100	43.688	ENSSTOG00000011790	RRP1B	88	43.448	Ictidomys_tridecemlineatus
ENSFALG00000002024	RRP1B	50	51.282	ENSSTOG00000011116	RRP1	63	58.273	Ictidomys_tridecemlineatus
ENSFALG00000002024	RRP1B	61	46.075	ENSKMAG00000005539	rrp1	68	48.110	Kryptolebias_marmoratus
ENSFALG00000002024	RRP1B	100	42.897	ENSLACG00000017332	-	92	42.371	Latimeria_chalumnae
ENSFALG00000002024	RRP1B	96	43.977	ENSLAFG00000000766	RRP1B	99	43.208	Loxodonta_africana
ENSFALG00000002024	RRP1B	100	45.293	ENSMFAG00000039152	RRP1B	92	45.392	Macaca_fascicularis
ENSFALG00000002024	RRP1B	100	45.492	ENSMNEG00000034269	RRP1B	92	45.667	Macaca_nemestrina
ENSFALG00000002024	RRP1B	100	45.566	ENSMLEG00000040044	RRP1B	96	45.679	Mandrillus_leucophaeus
ENSFALG00000002024	RRP1B	100	73.237	ENSMGAG00000014591	RRP1B	92	73.669	Meleagris_gallopavo
ENSFALG00000002024	RRP1B	70	58.523	ENSMICG00000004686	RRP1B	92	45.479	Microcebus_murinus
ENSFALG00000002024	RRP1B	100	48.143	ENSMODG00000021033	RRP1B	92	49.374	Monodelphis_domestica
ENSFALG00000002024	RRP1B	100	41.152	ENSMUSG00000058392	Rrp1b	92	42.271	Mus_musculus
ENSFALG00000002024	RRP1B	50	58.919	ENSMUSG00000061032	Rrp1	67	51.477	Mus_musculus
ENSFALG00000002024	RRP1B	100	41.209	MGP_PahariEiJ_G0023695	Rrp1b	92	40.646	Mus_pahari
ENSFALG00000002024	RRP1B	100	41.040	MGP_SPRETEiJ_G0022290	Rrp1b	92	41.192	Mus_spretus
ENSFALG00000002024	RRP1B	69	79.310	ENSMEUG00000003226	-	75	79.310	Notamacropus_eugenii
ENSFALG00000002024	RRP1B	100	43.034	ENSOANG00000006470	RRP1B	92	43.472	Ornithorhynchus_anatinus
ENSFALG00000002024	RRP1B	73	49.638	ENSOCUG00000025931	RRP1B	74	49.638	Oryctolagus_cuniculus
ENSFALG00000002024	RRP1B	64	48.562	ENSORLG00020007199	-	62	48.123	Oryzias_latipes_hni
ENSFALG00000002024	RRP1B	64	47.419	ENSORLG00015004425	-	62	46.897	Oryzias_latipes_hsok
ENSFALG00000002024	RRP1B	65	47.896	ENSOMEG00000016910	-	53	47.569	Oryzias_melastigma
ENSFALG00000002024	RRP1B	58	56.993	ENSOGAG00000009872	RRP1B	61	56.786	Otolemur_garnettii
ENSFALG00000002024	RRP1B	63	56.522	ENSPTIG00000016894	RRP1B	71	56.522	Panthera_tigris_altaica
ENSFALG00000002024	RRP1B	100	45.306	ENSPANG00000011090	RRP1B	92	45.554	Papio_anubis
ENSFALG00000002024	RRP1B	100	62.697	ENSPSIG00000008152	RRP1B	88	63.128	Pelodiscus_sinensis
ENSFALG00000002024	RRP1B	50	55.587	ENSPCIG00000015523	-	61	62.898	Phascolarctos_cinereus
ENSFALG00000002024	RRP1B	100	49.096	ENSPCIG00000015513	RRP1B	92	50.139	Phascolarctos_cinereus
ENSFALG00000002024	RRP1B	100	35.372	ENSPFOG00000007424	-	92	35.480	Poecilia_formosa
ENSFALG00000002024	RRP1B	61	46.254	ENSPREG00000015673	-	75	45.993	Poecilia_reticulata
ENSFALG00000002024	RRP1B	100	45.679	ENSPPYG00000011470	RRP1B	92	44.993	Pongo_abelii
ENSFALG00000002024	RRP1B	90	73.077	ENSPCAG00000013723	RRP1B	88	73.077	Procavia_capensis
ENSFALG00000002024	RRP1B	100	44.924	ENSPCOG00000017927	RRP1B	92	44.924	Propithecus_coquereli
ENSFALG00000002024	RRP1B	100	43.557	ENSRNOG00000001194	Rrp1b	92	43.113	Rattus_norvegicus
ENSFALG00000002024	RRP1B	100	41.328	ENSRBIG00000041689	RRP1B	92	41.734	Rhinopithecus_bieti
ENSFALG00000002024	RRP1B	100	45.245	ENSRROG00000031499	RRP1B	92	45.652	Rhinopithecus_roxellana
ENSFALG00000002024	RRP1B	100	43.386	ENSSBOG00000034727	RRP1B	97	43.651	Saimiri_boliviensis_boliviensis
ENSFALG00000002024	RRP1B	100	50.488	ENSSHAG00000017789	RRP1B	92	50.833	Sarcophilus_harrisii
ENSFALG00000002024	RRP1B	61	46.645	ENSSFOG00015003932	-	54	45.515	Scleropages_formosus
ENSFALG00000002024	RRP1B	65	47.516	ENSSMAG00000016847	-	69	45.486	Scophthalmus_maximus
ENSFALG00000002024	RRP1B	57	52.941	ENSSARG00000003108	-	62	51.724	Sorex_araneus
ENSFALG00000002024	RRP1B	100	55.274	ENSSPUG00000002834	RRP1B	92	55.556	Sphenodon_punctatus
ENSFALG00000002024	RRP1B	64	44.548	ENSSPAG00000005370	-	52	44.918	Stegastes_partitus
ENSFALG00000002024	RRP1B	55	66.265	ENSSSCG00000021698	RRP1B	53	66.265	Sus_scrofa
ENSFALG00000002024	RRP1B	100	89.943	ENSTGUG00000005926	RRP1B	97	91.092	Taeniopygia_guttata
ENSFALG00000002024	RRP1B	58	47.931	ENSTNIG00000005053	rrp1	63	47.387	Tetraodon_nigroviridis
ENSFALG00000002024	RRP1B	82	54.734	ENSTBEG00000000422	RRP1B	91	58.276	Tupaia_belangeri
ENSFALG00000002024	RRP1B	100	43.927	ENSUAMG00000026765	RRP1B	91	43.865	Ursus_americanus
ENSFALG00000002024	RRP1B	64	57.576	ENSUMAG00000025510	RRP1B	80	58.065	Ursus_maritimus
ENSFALG00000002024	RRP1B	100	44.944	ENSVVUG00000024509	RRP1B	96	44.023	Vulpes_vulpes
ENSFALG00000002024	RRP1B	55	51.111	ENSXETG00000013683	rrp1b	61	52.222	Xenopus_tropicalis
ENSFALG00000002024	RRP1B	61	44.728	ENSXMAG00000023123	-	51	44.595	Xiphophorus_maculatus