EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002412 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 15649 bases
Position: chrJH603184.1:263008-278656
Accession: 101805663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002516	Beta-Casp	PF10996.8	1.4e-20	1	1
ENSFALP00000002519	Beta-Casp	PF10996.8	8.9e-16	1	1
ENSFALP00000002516	Lactamase_B	PF00753.27	1.9e-06	1	1
ENSFALP00000002519	Lactamase_B	PF00753.27	2e-06	1	1
ENSFALP00000002519	RMMBL	PF07521.12	4.2e-15	1	1
ENSFALP00000002516	RMMBL	PF07521.12	4.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002531	CPSF2-202	5573	-	ENSFALP00000002519	795 (aa)	-	U3JIB5
ENSFALT00000002528	CPSF2-201	5621	-	ENSFALP00000002516	782 (aa)	XP_005047579	U3JIB2

Gene Model

Click here to download ENSFALG00000002412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002412	CPSF2	100	96.296	ENSG00000165934	CPSF2	100	96.296	Homo_sapiens
ENSFALG00000002412	CPSF2	100	85.279	ENSAPOG00000001242	cpsf2	100	85.279	Acanthochromis_polyacanthus
ENSFALG00000002412	CPSF2	100	85.678	ENSACIG00000009331	cpsf2	100	85.678	Amphilophus_citrinellus
ENSFALG00000002412	CPSF2	100	85.533	ENSAOCG00000014095	cpsf2	100	85.533	Amphiprion_ocellaris
ENSFALG00000002412	CPSF2	100	85.533	ENSAPEG00000009158	cpsf2	100	85.533	Amphiprion_percula
ENSFALG00000002412	CPSF2	96	86.034	ENSATEG00000017644	cpsf2	100	83.779	Anabas_testudineus
ENSFALG00000002412	CPSF2	100	98.724	ENSAPLG00000006330	CPSF2	100	98.724	Anas_platyrhynchos
ENSFALG00000002412	CPSF2	100	95.913	ENSACAG00000009245	CPSF2	100	95.913	Anolis_carolinensis
ENSFALG00000002412	CPSF2	100	96.296	ENSANAG00000022915	CPSF2	100	96.296	Aotus_nancymaae
ENSFALG00000002412	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSFALG00000002412	CPSF2	100	96.679	ENSBTAG00000010227	CPSF2	100	96.679	Bos_taurus
ENSFALG00000002412	CPSF2	100	40.493	WBGene00017313	cpsf-2	100	40.426	Caenorhabditis_elegans
ENSFALG00000002412	CPSF2	100	96.296	ENSCJAG00000018069	CPSF2	100	96.296	Callithrix_jacchus
ENSFALG00000002412	CPSF2	100	96.296	ENSCAFG00000010909	CPSF2	100	96.296	Canis_familiaris
ENSFALG00000002412	CPSF2	100	96.296	ENSCAFG00020020670	CPSF2	100	96.296	Canis_lupus_dingo
ENSFALG00000002412	CPSF2	100	96.679	ENSCHIG00000023848	CPSF2	100	96.679	Capra_hircus
ENSFALG00000002412	CPSF2	100	95.785	ENSTSYG00000009036	CPSF2	100	95.785	Carlito_syrichta
ENSFALG00000002412	CPSF2	100	96.424	ENSCPOG00000010899	CPSF2	100	96.424	Cavia_porcellus
ENSFALG00000002412	CPSF2	100	96.296	ENSCCAG00000028088	CPSF2	100	96.296	Cebus_capucinus
ENSFALG00000002412	CPSF2	100	96.424	ENSCATG00000030132	CPSF2	100	96.424	Cercocebus_atys
ENSFALG00000002412	CPSF2	100	96.296	ENSCLAG00000012404	CPSF2	100	96.296	Chinchilla_lanigera
ENSFALG00000002412	CPSF2	100	96.424	ENSCSAG00000011300	CPSF2	100	96.424	Chlorocebus_sabaeus
ENSFALG00000002412	CPSF2	100	90.294	ENSCHOG00000012904	CPSF2	100	90.294	Choloepus_hoffmanni
ENSFALG00000002412	CPSF2	100	98.084	ENSCPBG00000008766	CPSF2	97	98.084	Chrysemys_picta_bellii
ENSFALG00000002412	CPSF2	100	54.738	ENSCING00000007881	-	100	54.364	Ciona_intestinalis
ENSFALG00000002412	CPSF2	94	96.317	ENSCANG00000041651	CPSF2	100	96.317	Colobus_angolensis_palliatus
ENSFALG00000002412	CPSF2	100	96.169	ENSCGRG00001006901	Cpsf2	100	96.169	Cricetulus_griseus_chok1gshd
ENSFALG00000002412	CPSF2	100	96.169	ENSCGRG00000012416	Cpsf2	100	96.169	Cricetulus_griseus_crigri
ENSFALG00000002412	CPSF2	100	83.650	ENSCSEG00000004116	cpsf2	100	83.650	Cynoglossus_semilaevis
ENSFALG00000002412	CPSF2	100	85.152	ENSCVAG00000000095	cpsf2	100	85.152	Cyprinodon_variegatus
ENSFALG00000002412	CPSF2	100	85.316	ENSDARG00000028971	cpsf2	100	85.316	Danio_rerio
ENSFALG00000002412	CPSF2	100	96.552	ENSDNOG00000042757	CPSF2	100	96.552	Dasypus_novemcinctus
ENSFALG00000002412	CPSF2	100	96.041	ENSDORG00000013709	Cpsf2	100	96.041	Dipodomys_ordii
ENSFALG00000002412	CPSF2	100	52.868	FBgn0027873	Cpsf100	100	52.625	Drosophila_melanogaster
ENSFALG00000002412	CPSF2	100	87.372	ENSETEG00000012123	CPSF2	100	87.372	Echinops_telfairi
ENSFALG00000002412	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSFALG00000002412	CPSF2	91	96.587	ENSEASG00005021193	CPSF2	100	96.587	Equus_asinus_asinus
ENSFALG00000002412	CPSF2	100	96.169	ENSECAG00000023935	CPSF2	100	96.169	Equus_caballus
ENSFALG00000002412	CPSF2	100	84.442	ENSELUG00000008442	cpsf2	100	84.442	Esox_lucius
ENSFALG00000002412	CPSF2	100	96.169	ENSFCAG00000007886	CPSF2	100	96.169	Felis_catus
ENSFALG00000002412	CPSF2	100	96.296	ENSFDAG00000006327	CPSF2	100	96.296	Fukomys_damarensis
ENSFALG00000002412	CPSF2	96	84.635	ENSFHEG00000015465	cpsf2	98	85.026	Fundulus_heteroclitus
ENSFALG00000002412	CPSF2	100	83.859	ENSGMOG00000008761	cpsf2	100	83.859	Gadus_morhua
ENSFALG00000002412	CPSF2	100	98.593	ENSGALG00000010783	CPSF2	100	98.593	Gallus_gallus
ENSFALG00000002412	CPSF2	100	85.279	ENSGAFG00000001407	cpsf2	100	85.279	Gambusia_affinis
ENSFALG00000002412	CPSF2	100	85.025	ENSGACG00000008418	cpsf2	100	85.025	Gasterosteus_aculeatus
ENSFALG00000002412	CPSF2	100	97.957	ENSGAGG00000008287	CPSF2	100	97.957	Gopherus_agassizii
ENSFALG00000002412	CPSF2	100	96.296	ENSGGOG00000011799	CPSF2	100	96.296	Gorilla_gorilla
ENSFALG00000002412	CPSF2	100	85.279	ENSHBUG00000023466	cpsf2	100	85.279	Haplochromis_burtoni
ENSFALG00000002412	CPSF2	100	96.169	ENSHGLG00000018311	CPSF2	100	96.169	Heterocephalus_glaber_female
ENSFALG00000002412	CPSF2	100	96.169	ENSHGLG00100016460	CPSF2	100	96.169	Heterocephalus_glaber_male
ENSFALG00000002412	CPSF2	100	85.025	ENSHCOG00000019527	cpsf2	98	85.025	Hippocampus_comes
ENSFALG00000002412	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSFALG00000002412	CPSF2	100	96.296	ENSSTOG00000009528	CPSF2	100	96.296	Ictidomys_tridecemlineatus
ENSFALG00000002412	CPSF2	100	96.424	ENSJJAG00000017925	Cpsf2	100	96.424	Jaculus_jaculus
ENSFALG00000002412	CPSF2	100	84.645	ENSKMAG00000019429	cpsf2	100	84.645	Kryptolebias_marmoratus
ENSFALG00000002412	CPSF2	95	84.471	ENSLBEG00000011585	cpsf2	100	84.471	Labrus_bergylta
ENSFALG00000002412	CPSF2	100	90.921	ENSLACG00000019024	CPSF2	100	90.921	Latimeria_chalumnae
ENSFALG00000002412	CPSF2	100	88.213	ENSLOCG00000014102	cpsf2	100	88.213	Lepisosteus_oculatus
ENSFALG00000002412	CPSF2	100	96.051	ENSLAFG00000004891	CPSF2	100	96.051	Loxodonta_africana
ENSFALG00000002412	CPSF2	100	96.424	ENSMFAG00000041212	CPSF2	100	96.424	Macaca_fascicularis
ENSFALG00000002412	CPSF2	100	96.424	ENSMMUG00000000699	CPSF2	100	96.424	Macaca_mulatta
ENSFALG00000002412	CPSF2	100	96.424	ENSMNEG00000031584	CPSF2	100	96.424	Macaca_nemestrina
ENSFALG00000002412	CPSF2	100	96.424	ENSMLEG00000029394	CPSF2	100	96.424	Mandrillus_leucophaeus
ENSFALG00000002412	CPSF2	100	85.279	ENSMAMG00000004235	cpsf2	100	85.279	Mastacembelus_armatus
ENSFALG00000002412	CPSF2	100	85.406	ENSMZEG00005001769	cpsf2	100	85.406	Maylandia_zebra
ENSFALG00000002412	CPSF2	100	98.340	ENSMGAG00000013122	CPSF2	100	98.340	Meleagris_gallopavo
ENSFALG00000002412	CPSF2	100	96.169	ENSMAUG00000015160	Cpsf2	100	96.169	Mesocricetus_auratus
ENSFALG00000002412	CPSF2	100	96.552	ENSMICG00000016441	CPSF2	100	96.552	Microcebus_murinus
ENSFALG00000002412	CPSF2	100	96.169	ENSMOCG00000015372	Cpsf2	100	96.169	Microtus_ochrogaster
ENSFALG00000002412	CPSF2	100	80.964	ENSMMOG00000015590	cpsf2	100	80.964	Mola_mola
ENSFALG00000002412	CPSF2	100	96.935	ENSMODG00000002042	CPSF2	100	96.935	Monodelphis_domestica
ENSFALG00000002412	CPSF2	100	82.234	ENSMALG00000022275	cpsf2	100	82.234	Monopterus_albus
ENSFALG00000002412	CPSF2	100	95.530	ENSMUSG00000041781	Cpsf2	100	95.530	Mus_musculus
ENSFALG00000002412	CPSF2	100	95.785	MGP_PahariEiJ_G0029791	Cpsf2	100	95.785	Mus_pahari
ENSFALG00000002412	CPSF2	100	95.530	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.530	Mus_spretus
ENSFALG00000002412	CPSF2	100	96.296	ENSMPUG00000007617	CPSF2	98	96.296	Mustela_putorius_furo
ENSFALG00000002412	CPSF2	100	96.041	ENSMLUG00000005570	CPSF2	100	96.041	Myotis_lucifugus
ENSFALG00000002412	CPSF2	100	96.552	ENSNGAG00000020312	Cpsf2	100	96.552	Nannospalax_galili
ENSFALG00000002412	CPSF2	100	85.551	ENSNBRG00000022402	cpsf2	100	85.551	Neolamprologus_brichardi
ENSFALG00000002412	CPSF2	100	95.402	ENSNLEG00000017132	CPSF2	100	95.402	Nomascus_leucogenys
ENSFALG00000002412	CPSF2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSFALG00000002412	CPSF2	94	89.344	ENSOPRG00000008484	-	100	89.344	Ochotona_princeps
ENSFALG00000002412	CPSF2	100	96.296	ENSODEG00000008682	CPSF2	100	96.296	Octodon_degus
ENSFALG00000002412	CPSF2	100	85.787	ENSONIG00000005901	cpsf2	100	85.787	Oreochromis_niloticus
ENSFALG00000002412	CPSF2	100	96.169	ENSOANG00000003822	CPSF2	100	96.169	Ornithorhynchus_anatinus
ENSFALG00000002412	CPSF2	100	96.424	ENSOCUG00000005713	CPSF2	100	96.424	Oryctolagus_cuniculus
ENSFALG00000002412	CPSF2	100	79.695	ENSORLG00000011628	cpsf2	100	79.695	Oryzias_latipes
ENSFALG00000002412	CPSF2	100	84.518	ENSORLG00020016980	cpsf2	100	84.518	Oryzias_latipes_hni
ENSFALG00000002412	CPSF2	100	84.518	ENSORLG00015011910	cpsf2	100	84.518	Oryzias_latipes_hsok
ENSFALG00000002412	CPSF2	100	83.712	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSFALG00000002412	CPSF2	100	93.631	ENSOARG00000012889	CPSF2	100	93.631	Ovis_aries
ENSFALG00000002412	CPSF2	100	96.296	ENSPPAG00000039666	CPSF2	100	96.296	Pan_paniscus
ENSFALG00000002412	CPSF2	99	96.164	ENSPPRG00000010869	CPSF2	100	96.164	Panthera_pardus
ENSFALG00000002412	CPSF2	100	96.169	ENSPTIG00000021202	CPSF2	100	96.169	Panthera_tigris_altaica
ENSFALG00000002412	CPSF2	100	96.296	ENSPTRG00000006651	CPSF2	100	96.296	Pan_troglodytes
ENSFALG00000002412	CPSF2	100	96.424	ENSPANG00000017417	CPSF2	100	96.424	Papio_anubis
ENSFALG00000002412	CPSF2	100	81.703	ENSPKIG00000021453	cpsf2	100	81.703	Paramormyrops_kingsleyae
ENSFALG00000002412	CPSF2	100	97.190	ENSPSIG00000006289	CPSF2	100	97.190	Pelodiscus_sinensis
ENSFALG00000002412	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSFALG00000002412	CPSF2	100	96.296	ENSPEMG00000007917	Cpsf2	100	96.296	Peromyscus_maniculatus_bairdii
ENSFALG00000002412	CPSF2	100	74.210	ENSPMAG00000006205	cpsf2	100	74.210	Petromyzon_marinus
ENSFALG00000002412	CPSF2	100	96.935	ENSPCIG00000011393	CPSF2	100	96.935	Phascolarctos_cinereus
ENSFALG00000002412	CPSF2	100	85.279	ENSPFOG00000018648	cpsf2	100	85.279	Poecilia_formosa
ENSFALG00000002412	CPSF2	100	85.279	ENSPLAG00000019199	cpsf2	99	85.279	Poecilia_latipinna
ENSFALG00000002412	CPSF2	96	85.771	ENSPMEG00000012100	cpsf2	100	84.873	Poecilia_mexicana
ENSFALG00000002412	CPSF2	100	85.279	ENSPREG00000008960	cpsf2	100	85.279	Poecilia_reticulata
ENSFALG00000002412	CPSF2	63	94.769	ENSPPYG00000029685	-	100	94.769	Pongo_abelii
ENSFALG00000002412	CPSF2	100	96.169	ENSPCAG00000012477	CPSF2	100	96.169	Procavia_capensis
ENSFALG00000002412	CPSF2	100	96.424	ENSPCOG00000026387	CPSF2	100	96.424	Propithecus_coquereli
ENSFALG00000002412	CPSF2	65	98.469	ENSPVAG00000004223	CPSF2	65	98.469	Pteropus_vampyrus
ENSFALG00000002412	CPSF2	100	85.425	ENSPNYG00000023356	cpsf2	100	85.425	Pundamilia_nyererei
ENSFALG00000002412	CPSF2	100	86.658	ENSPNAG00000001849	cpsf2	100	86.658	Pygocentrus_nattereri
ENSFALG00000002412	CPSF2	100	96.169	ENSRNOG00000005733	Cpsf2	100	96.169	Rattus_norvegicus
ENSFALG00000002412	CPSF2	100	96.424	ENSRBIG00000044792	CPSF2	100	96.424	Rhinopithecus_bieti
ENSFALG00000002412	CPSF2	100	96.424	ENSRROG00000034875	CPSF2	100	96.424	Rhinopithecus_roxellana
ENSFALG00000002412	CPSF2	100	96.296	ENSSBOG00000024571	CPSF2	100	96.296	Saimiri_boliviensis_boliviensis
ENSFALG00000002412	CPSF2	100	96.935	ENSSHAG00000010458	CPSF2	100	96.935	Sarcophilus_harrisii
ENSFALG00000002412	CPSF2	100	86.929	ENSSFOG00015002117	cpsf2	100	87.166	Scleropages_formosus
ENSFALG00000002412	CPSF2	100	83.965	ENSSMAG00000002001	cpsf2	100	84.918	Scophthalmus_maximus
ENSFALG00000002412	CPSF2	100	86.041	ENSSDUG00000004084	cpsf2	100	86.041	Seriola_dumerili
ENSFALG00000002412	CPSF2	100	85.932	ENSSLDG00000024330	cpsf2	100	85.932	Seriola_lalandi_dorsalis
ENSFALG00000002412	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSFALG00000002412	CPSF2	100	96.935	ENSSPUG00000013485	CPSF2	100	96.935	Sphenodon_punctatus
ENSFALG00000002412	CPSF2	100	84.898	ENSSPAG00000013284	cpsf2	100	84.898	Stegastes_partitus
ENSFALG00000002412	CPSF2	100	96.296	ENSSSCG00000002447	CPSF2	100	96.296	Sus_scrofa
ENSFALG00000002412	CPSF2	100	99.616	ENSTGUG00000012571	-	100	99.616	Taeniopygia_guttata
ENSFALG00000002412	CPSF2	100	84.557	ENSTRUG00000003742	cpsf2	100	84.557	Takifugu_rubripes
ENSFALG00000002412	CPSF2	100	83.544	ENSTNIG00000012228	cpsf2	100	84.304	Tetraodon_nigroviridis
ENSFALG00000002412	CPSF2	91	96.667	ENSTBEG00000004530	CPSF2	94	96.667	Tupaia_belangeri
ENSFALG00000002412	CPSF2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSFALG00000002412	CPSF2	100	96.424	ENSUAMG00000028071	CPSF2	100	96.424	Ursus_americanus
ENSFALG00000002412	CPSF2	100	96.424	ENSUMAG00000005029	CPSF2	100	96.424	Ursus_maritimus
ENSFALG00000002412	CPSF2	99	96.292	ENSVPAG00000003503	CPSF2	100	96.292	Vicugna_pacos
ENSFALG00000002412	CPSF2	100	96.296	ENSVVUG00000024642	CPSF2	100	96.296	Vulpes_vulpes
ENSFALG00000002412	CPSF2	100	92.593	ENSXETG00000010289	cpsf2	100	92.593	Xenopus_tropicalis
ENSFALG00000002412	CPSF2	100	85.533	ENSXCOG00000001764	cpsf2	100	85.533	Xiphophorus_couchianus
ENSFALG00000002412	CPSF2	100	85.660	ENSXMAG00000017048	cpsf2	100	85.660	Xiphophorus_maculatus