EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002424 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 6080 bases
Position: chrJH603197.1:2114950-2121029
Accession: 101821407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002524	TRM13	PF05206.14	5.8e-91	1	1
ENSFALP00000002524	zf-U11-48K	PF05253.12	2e-11	1	1
ENSFALP00000002524	zf-TRM13_CCCH	PF11722.8	4.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002536	TRMT13-201	1875	XM_005050540	ENSFALP00000002524	474 (aa)	XP_005050597	U3JIC0

Gene Model

Click here to download ENSFALG00000002424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002424	TRMT13	99	64.644	ENSG00000122435	TRMT13	99	64.644	Homo_sapiens
ENSFALG00000002424	TRMT13	95	48.880	ENSAPOG00000015131	trmt13	99	49.084	Acanthochromis_polyacanthus
ENSFALG00000002424	TRMT13	99	65.272	ENSAMEG00000008917	TRMT13	99	65.272	Ailuropoda_melanoleuca
ENSFALG00000002424	TRMT13	97	53.715	ENSACIG00000005804	trmt13	96	51.915	Amphilophus_citrinellus
ENSFALG00000002424	TRMT13	95	49.491	ENSAOCG00000023585	trmt13	99	49.491	Amphiprion_ocellaris
ENSFALG00000002424	TRMT13	95	49.898	ENSAPEG00000004025	trmt13	99	49.898	Amphiprion_percula
ENSFALG00000002424	TRMT13	95	54.212	ENSATEG00000006597	trmt13	96	54.212	Anabas_testudineus
ENSFALG00000002424	TRMT13	89	83.333	ENSAPLG00000014924	TRMT13	100	83.333	Anas_platyrhynchos
ENSFALG00000002424	TRMT13	95	67.841	ENSACAG00000003498	TRMT13	97	67.841	Anolis_carolinensis
ENSFALG00000002424	TRMT13	99	64.644	ENSANAG00000019525	TRMT13	100	66.055	Aotus_nancymaae
ENSFALG00000002424	TRMT13	95	56.018	ENSACLG00000020018	trmt13	98	56.018	Astatotilapia_calliptera
ENSFALG00000002424	TRMT13	95	56.103	ENSAMXG00000017963	trmt13	97	56.716	Astyanax_mexicanus
ENSFALG00000002424	TRMT13	99	65.063	ENSBTAG00000015781	TRMT13	99	65.063	Bos_taurus
ENSFALG00000002424	TRMT13	99	63.389	ENSCJAG00000000200	TRMT13	99	66.055	Callithrix_jacchus
ENSFALG00000002424	TRMT13	65	64.103	ENSCAFG00000020021	TRMT13	98	64.103	Canis_familiaris
ENSFALG00000002424	TRMT13	57	71.956	ENSCAFG00020011572	TRMT13	94	71.956	Canis_lupus_dingo
ENSFALG00000002424	TRMT13	99	65.690	ENSCHIG00000015395	TRMT13	99	65.690	Capra_hircus
ENSFALG00000002424	TRMT13	96	64.363	ENSTSYG00000010811	TRMT13	89	75.556	Carlito_syrichta
ENSFALG00000002424	TRMT13	75	47.778	ENSCAPG00000009085	TRMT13	99	49.722	Cavia_aperea
ENSFALG00000002424	TRMT13	99	63.866	ENSCPOG00000000694	TRMT13	99	63.866	Cavia_porcellus
ENSFALG00000002424	TRMT13	99	65.063	ENSCCAG00000023772	TRMT13	100	66.055	Cebus_capucinus
ENSFALG00000002424	TRMT13	99	64.435	ENSCATG00000033556	TRMT13	100	65.138	Cercocebus_atys
ENSFALG00000002424	TRMT13	88	64.608	ENSCLAG00000008220	TRMT13	99	64.846	Chinchilla_lanigera
ENSFALG00000002424	TRMT13	99	64.435	ENSCSAG00000001506	TRMT13	99	64.435	Chlorocebus_sabaeus
ENSFALG00000002424	TRMT13	99	75.527	ENSCPBG00000026671	TRMT13	99	75.527	Chrysemys_picta_bellii
ENSFALG00000002424	TRMT13	99	64.644	ENSCANG00000034659	TRMT13	100	66.055	Colobus_angolensis_palliatus
ENSFALG00000002424	TRMT13	98	63.983	ENSCGRG00001021601	Trmt13	98	63.983	Cricetulus_griseus_chok1gshd
ENSFALG00000002424	TRMT13	51	59.274	ENSCGRG00000000093	-	96	59.274	Cricetulus_griseus_crigri
ENSFALG00000002424	TRMT13	95	51.991	ENSCSEG00000000591	trmt13	96	51.991	Cynoglossus_semilaevis
ENSFALG00000002424	TRMT13	95	53.602	ENSCVAG00000017342	trmt13	93	53.830	Cyprinodon_variegatus
ENSFALG00000002424	TRMT13	96	59.219	ENSDARG00000102846	trmt13	97	59.219	Danio_rerio
ENSFALG00000002424	TRMT13	54	72.587	ENSDNOG00000001710	TRMT13	79	72.587	Dasypus_novemcinctus
ENSFALG00000002424	TRMT13	99	62.869	ENSDORG00000015808	Trmt13	98	62.869	Dipodomys_ordii
ENSFALG00000002424	TRMT13	95	35.106	FBgn0037435	CG18048	93	35.106	Drosophila_melanogaster
ENSFALG00000002424	TRMT13	99	55.625	ENSETEG00000005819	TRMT13	99	55.625	Echinops_telfairi
ENSFALG00000002424	TRMT13	96	48.291	ENSEBUG00000014444	trmt13	96	48.696	Eptatretus_burgeri
ENSFALG00000002424	TRMT13	99	66.318	ENSEASG00005015918	TRMT13	99	66.318	Equus_asinus_asinus
ENSFALG00000002424	TRMT13	99	66.318	ENSECAG00000022626	TRMT13	99	66.318	Equus_caballus
ENSFALG00000002424	TRMT13	79	58.147	ENSEEUG00000000294	TRMT13	80	58.147	Erinaceus_europaeus
ENSFALG00000002424	TRMT13	95	56.209	ENSELUG00000003803	trmt13	97	56.427	Esox_lucius
ENSFALG00000002424	TRMT13	99	65.272	ENSFCAG00000030618	TRMT13	100	66.972	Felis_catus
ENSFALG00000002424	TRMT13	98	63.694	ENSFDAG00000006342	TRMT13	98	63.694	Fukomys_damarensis
ENSFALG00000002424	TRMT13	77	55.906	ENSFHEG00000022954	trmt13	96	55.416	Fundulus_heteroclitus
ENSFALG00000002424	TRMT13	95	52.455	ENSGMOG00000013223	trmt13	100	51.316	Gadus_morhua
ENSFALG00000002424	TRMT13	96	79.956	ENSGALG00000005290	TRMT13	97	80.000	Gallus_gallus
ENSFALG00000002424	TRMT13	75	55.858	ENSGAFG00000001577	trmt13	80	55.858	Gambusia_affinis
ENSFALG00000002424	TRMT13	96	53.913	ENSGACG00000013428	trmt13	97	54.486	Gasterosteus_aculeatus
ENSFALG00000002424	TRMT13	99	75.052	ENSGAGG00000023303	TRMT13	94	85.328	Gopherus_agassizii
ENSFALG00000002424	TRMT13	99	64.435	ENSGGOG00000005616	TRMT13	99	64.435	Gorilla_gorilla
ENSFALG00000002424	TRMT13	95	56.332	ENSHBUG00000007754	trmt13	98	56.332	Haplochromis_burtoni
ENSFALG00000002424	TRMT13	98	63.907	ENSHGLG00000002164	TRMT13	98	63.907	Heterocephalus_glaber_female
ENSFALG00000002424	TRMT13	98	63.907	ENSHGLG00100001618	TRMT13	98	63.907	Heterocephalus_glaber_male
ENSFALG00000002424	TRMT13	95	50.441	ENSHCOG00000020553	trmt13	97	50.441	Hippocampus_comes
ENSFALG00000002424	TRMT13	95	57.111	ENSIPUG00000024787	trmt13	97	57.333	Ictalurus_punctatus
ENSFALG00000002424	TRMT13	98	64.756	ENSSTOG00000013483	TRMT13	98	64.756	Ictidomys_tridecemlineatus
ENSFALG00000002424	TRMT13	96	64.502	ENSJJAG00000018012	Trmt13	97	64.502	Jaculus_jaculus
ENSFALG00000002424	TRMT13	64	53.770	ENSKMAG00000007639	trmt13	93	53.770	Kryptolebias_marmoratus
ENSFALG00000002424	TRMT13	95	51.073	ENSLBEG00000020238	trmt13	98	51.073	Labrus_bergylta
ENSFALG00000002424	TRMT13	95	63.676	ENSLACG00000013153	TRMT13	99	63.224	Latimeria_chalumnae
ENSFALG00000002424	TRMT13	95	60.089	ENSLOCG00000000418	trmt13	96	60.310	Lepisosteus_oculatus
ENSFALG00000002424	TRMT13	77	65.135	ENSLAFG00000002383	TRMT13	100	65.135	Loxodonta_africana
ENSFALG00000002424	TRMT13	99	63.808	ENSMFAG00000034681	TRMT13	100	66.055	Macaca_fascicularis
ENSFALG00000002424	TRMT13	99	63.808	ENSMMUG00000004243	TRMT13	100	66.055	Macaca_mulatta
ENSFALG00000002424	TRMT13	99	63.808	ENSMNEG00000036102	TRMT13	100	66.055	Macaca_nemestrina
ENSFALG00000002424	TRMT13	99	64.644	ENSMLEG00000034258	TRMT13	100	66.055	Mandrillus_leucophaeus
ENSFALG00000002424	TRMT13	96	53.433	ENSMAMG00000016597	trmt13	97	53.433	Mastacembelus_armatus
ENSFALG00000002424	TRMT13	95	55.799	ENSMZEG00005020959	trmt13	98	55.799	Maylandia_zebra
ENSFALG00000002424	TRMT13	89	82.660	ENSMGAG00000006970	TRMT13	99	82.660	Meleagris_gallopavo
ENSFALG00000002424	TRMT13	97	64.744	ENSMAUG00000010448	Trmt13	97	64.744	Mesocricetus_auratus
ENSFALG00000002424	TRMT13	99	64.644	ENSMICG00000005283	TRMT13	100	67.890	Microcebus_murinus
ENSFALG00000002424	TRMT13	98	65.180	ENSMOCG00000019914	Trmt13	98	65.180	Microtus_ochrogaster
ENSFALG00000002424	TRMT13	54	53.053	ENSMMOG00000007762	trmt13	88	53.053	Mola_mola
ENSFALG00000002424	TRMT13	96	66.524	ENSMODG00000003646	TRMT13	96	66.524	Monodelphis_domestica
ENSFALG00000002424	TRMT13	95	52.550	ENSMALG00000020965	trmt13	96	52.550	Monopterus_albus
ENSFALG00000002424	TRMT13	95	65.577	MGP_CAROLIEiJ_G0025568	Trmt13	94	72.024	Mus_caroli
ENSFALG00000002424	TRMT13	95	66.079	ENSMUSG00000033439	Trmt13	94	73.214	Mus_musculus
ENSFALG00000002424	TRMT13	98	64.119	MGP_PahariEiJ_G0027014	Trmt13	93	72.892	Mus_pahari
ENSFALG00000002424	TRMT13	98	64.255	MGP_SPRETEiJ_G0026518	Trmt13	94	73.214	Mus_spretus
ENSFALG00000002424	TRMT13	78	64.096	ENSMPUG00000002078	-	99	64.096	Mustela_putorius_furo
ENSFALG00000002424	TRMT13	98	62.766	ENSMLUG00000002124	TRMT13	98	62.766	Myotis_lucifugus
ENSFALG00000002424	TRMT13	95	52.174	ENSNBRG00000006783	trmt13	96	52.174	Neolamprologus_brichardi
ENSFALG00000002424	TRMT13	99	64.017	ENSNLEG00000035917	TRMT13	100	65.138	Nomascus_leucogenys
ENSFALG00000002424	TRMT13	52	64.113	ENSMEUG00000013346	-	100	64.113	Notamacropus_eugenii
ENSFALG00000002424	TRMT13	66	70.956	ENSOPRG00000012048	TRMT13	66	70.956	Ochotona_princeps
ENSFALG00000002424	TRMT13	95	55.459	ENSONIG00000004574	trmt13	98	55.459	Oreochromis_niloticus
ENSFALG00000002424	TRMT13	90	66.359	ENSOANG00000012057	TRMT13	100	66.359	Ornithorhynchus_anatinus
ENSFALG00000002424	TRMT13	99	64.151	ENSOCUG00000023095	TRMT13	99	64.151	Oryctolagus_cuniculus
ENSFALG00000002424	TRMT13	95	50.976	ENSORLG00000003320	trmt13	98	50.542	Oryzias_latipes
ENSFALG00000002424	TRMT13	95	50.655	ENSORLG00020005972	trmt13	97	50.429	Oryzias_latipes_hni
ENSFALG00000002424	TRMT13	95	54.664	ENSORLG00015002270	trmt13	98	54.664	Oryzias_latipes_hsok
ENSFALG00000002424	TRMT13	95	54.130	ENSOMEG00000006724	trmt13	93	54.565	Oryzias_melastigma
ENSFALG00000002424	TRMT13	98	64.854	ENSOGAG00000005618	TRMT13	96	64.669	Otolemur_garnettii
ENSFALG00000002424	TRMT13	99	65.690	ENSOARG00000017983	TRMT13	99	65.690	Ovis_aries
ENSFALG00000002424	TRMT13	99	64.644	ENSPPAG00000043736	TRMT13	99	64.644	Pan_paniscus
ENSFALG00000002424	TRMT13	99	65.272	ENSPPRG00000003424	TRMT13	100	66.972	Panthera_pardus
ENSFALG00000002424	TRMT13	99	65.272	ENSPTIG00000018598	TRMT13	100	66.972	Panthera_tigris_altaica
ENSFALG00000002424	TRMT13	99	64.435	ENSPTRG00000001001	TRMT13	99	64.435	Pan_troglodytes
ENSFALG00000002424	TRMT13	99	64.644	ENSPANG00000007598	TRMT13	100	66.055	Papio_anubis
ENSFALG00000002424	TRMT13	95	56.667	ENSPKIG00000001514	trmt13	97	56.667	Paramormyrops_kingsleyae
ENSFALG00000002424	TRMT13	86	75.121	ENSPSIG00000012703	TRMT13	99	75.121	Pelodiscus_sinensis
ENSFALG00000002424	TRMT13	95	54.889	ENSPMGG00000013298	trmt13	92	54.889	Periophthalmus_magnuspinnatus
ENSFALG00000002424	TRMT13	98	63.907	ENSPEMG00000000275	Trmt13	98	63.907	Peromyscus_maniculatus_bairdii
ENSFALG00000002424	TRMT13	94	49.574	ENSPMAG00000000823	trmt13	99	48.967	Petromyzon_marinus
ENSFALG00000002424	TRMT13	98	67.789	ENSPCIG00000007699	TRMT13	98	68.211	Phascolarctos_cinereus
ENSFALG00000002424	TRMT13	96	52.723	ENSPFOG00000008675	trmt13	96	52.723	Poecilia_formosa
ENSFALG00000002424	TRMT13	95	52.381	ENSPLAG00000009709	trmt13	99	52.381	Poecilia_latipinna
ENSFALG00000002424	TRMT13	95	51.515	ENSPMEG00000022954	trmt13	99	51.515	Poecilia_mexicana
ENSFALG00000002424	TRMT13	84	51.574	ENSPREG00000005645	trmt13	91	55.435	Poecilia_reticulata
ENSFALG00000002424	TRMT13	99	64.017	ENSPPYG00000001120	TRMT13	99	64.017	Pongo_abelii
ENSFALG00000002424	TRMT13	99	64.927	ENSPCAG00000002340	TRMT13	99	64.927	Procavia_capensis
ENSFALG00000002424	TRMT13	99	64.644	ENSPCOG00000017984	TRMT13	100	68.807	Propithecus_coquereli
ENSFALG00000002424	TRMT13	99	65.900	ENSPVAG00000017430	TRMT13	99	65.900	Pteropus_vampyrus
ENSFALG00000002424	TRMT13	95	54.031	ENSPNYG00000013690	trmt13	98	54.031	Pundamilia_nyererei
ENSFALG00000002424	TRMT13	95	57.451	ENSPNAG00000022130	trmt13	98	57.451	Pygocentrus_nattereri
ENSFALG00000002424	TRMT13	98	64.043	ENSRNOG00000015140	Trmt13	95	64.043	Rattus_norvegicus
ENSFALG00000002424	TRMT13	99	64.644	ENSRBIG00000037686	TRMT13	100	66.055	Rhinopithecus_bieti
ENSFALG00000002424	TRMT13	99	64.644	ENSRROG00000044057	TRMT13	100	66.055	Rhinopithecus_roxellana
ENSFALG00000002424	TRMT13	99	64.854	ENSSBOG00000026541	TRMT13	100	66.055	Saimiri_boliviensis_boliviensis
ENSFALG00000002424	TRMT13	91	67.882	ENSSHAG00000005213	TRMT13	97	67.882	Sarcophilus_harrisii
ENSFALG00000002424	TRMT13	95	55.188	ENSSFOG00015017560	trmt13	97	55.531	Scleropages_formosus
ENSFALG00000002424	TRMT13	96	53.419	ENSSMAG00000014592	trmt13	96	53.419	Scophthalmus_maximus
ENSFALG00000002424	TRMT13	95	52.026	ENSSDUG00000015508	trmt13	95	51.907	Seriola_dumerili
ENSFALG00000002424	TRMT13	95	52.008	ENSSLDG00000019060	trmt13	95	52.008	Seriola_lalandi_dorsalis
ENSFALG00000002424	TRMT13	98	61.064	ENSSARG00000010344	TRMT13	99	61.064	Sorex_araneus
ENSFALG00000002424	TRMT13	95	73.068	ENSSPUG00000016339	TRMT13	98	73.068	Sphenodon_punctatus
ENSFALG00000002424	TRMT13	95	53.057	ENSSPAG00000011922	trmt13	98	52.928	Stegastes_partitus
ENSFALG00000002424	TRMT13	99	66.109	ENSSSCG00000006869	TRMT13	99	66.109	Sus_scrofa
ENSFALG00000002424	TRMT13	97	93.696	ENSTGUG00000005253	TRMT13	99	93.696	Taeniopygia_guttata
ENSFALG00000002424	TRMT13	94	52.735	ENSTRUG00000008400	trmt13	97	52.381	Takifugu_rubripes
ENSFALG00000002424	TRMT13	73	70.253	ENSTBEG00000008911	TRMT13	87	70.253	Tupaia_belangeri
ENSFALG00000002424	TRMT13	99	63.180	ENSUAMG00000017251	TRMT13	99	63.180	Ursus_americanus
ENSFALG00000002424	TRMT13	99	65.900	ENSUMAG00000007901	TRMT13	99	67.599	Ursus_maritimus
ENSFALG00000002424	TRMT13	88	53.596	ENSVPAG00000001034	TRMT13	99	53.596	Vicugna_pacos
ENSFALG00000002424	TRMT13	99	65.618	ENSVVUG00000021996	TRMT13	99	65.618	Vulpes_vulpes
ENSFALG00000002424	TRMT13	98	58.836	ENSXETG00000013204	trmt13	99	58.836	Xenopus_tropicalis
ENSFALG00000002424	TRMT13	95	51.948	ENSXMAG00000010765	trmt13	99	51.948	Xiphophorus_maculatus