EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002443 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 8155 bases
Position: chrJH603197.1:2147001-2155155
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002541	RTC	PF01137.21	1.8e-85	1	1
ENSFALP00000002541	RTC_insert	PF05189.13	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002553	RTCA-201	2009	-	ENSFALP00000002541	372 (aa)	-	U3JID7

Gene Model

Click here to download ENSFALG00000002443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002443	RTCA	90	84.384	ENSG00000137996	RTCA	100	81.633	Homo_sapiens
ENSFALG00000002443	RTCA	91	68.343	ENSAPOG00000001345	rtca	92	68.343	Acanthochromis_polyacanthus
ENSFALG00000002443	RTCA	65	80.658	ENSAMEG00000008855	RTCA	90	80.658	Ailuropoda_melanoleuca
ENSFALG00000002443	RTCA	91	68.047	ENSACIG00000019643	rtca	93	68.047	Amphilophus_citrinellus
ENSFALG00000002443	RTCA	91	68.047	ENSAOCG00000014979	rtca	92	68.047	Amphiprion_ocellaris
ENSFALG00000002443	RTCA	91	68.047	ENSAPEG00000006945	rtca	92	68.047	Amphiprion_percula
ENSFALG00000002443	RTCA	91	66.176	ENSATEG00000006315	rtca	93	66.176	Anabas_testudineus
ENSFALG00000002443	RTCA	85	91.589	ENSAPLG00000015430	RTCA	91	91.589	Anas_platyrhynchos
ENSFALG00000002443	RTCA	90	82.583	ENSANAG00000025446	RTCA	91	82.583	Aotus_nancymaae
ENSFALG00000002443	RTCA	91	67.456	ENSACLG00000020770	rtca	92	67.456	Astatotilapia_calliptera
ENSFALG00000002443	RTCA	90	70.659	ENSAMXG00000043271	rtca	91	70.659	Astyanax_mexicanus
ENSFALG00000002443	RTCA	91	82.353	ENSBTAG00000006321	RTCA	93	82.353	Bos_taurus
ENSFALG00000002443	RTCA	90	82.883	ENSCJAG00000003398	RTCA	91	82.883	Callithrix_jacchus
ENSFALG00000002443	RTCA	91	82.059	ENSCAFG00000020010	RTCA	63	82.059	Canis_familiaris
ENSFALG00000002443	RTCA	91	82.059	ENSCAFG00020011528	RTCA	53	82.059	Canis_lupus_dingo
ENSFALG00000002443	RTCA	91	82.353	ENSCHIG00000018937	RTCA	93	82.353	Capra_hircus
ENSFALG00000002443	RTCA	91	81.176	ENSTSYG00000011305	RTCA	93	81.176	Carlito_syrichta
ENSFALG00000002443	RTCA	90	82.583	ENSCCAG00000021844	RTCA	99	82.583	Cebus_capucinus
ENSFALG00000002443	RTCA	90	80.636	ENSCATG00000019364	RTCA	89	83.696	Cercocebus_atys
ENSFALG00000002443	RTCA	76	83.451	ENSCLAG00000006125	RTCA	90	83.451	Chinchilla_lanigera
ENSFALG00000002443	RTCA	90	84.084	ENSCSAG00000001509	RTCA	91	84.084	Chlorocebus_sabaeus
ENSFALG00000002443	RTCA	91	81.471	ENSCHOG00000005211	RTCA	93	81.471	Choloepus_hoffmanni
ENSFALG00000002443	RTCA	91	90.294	ENSCPBG00000026658	RTCA	99	90.294	Chrysemys_picta_bellii
ENSFALG00000002443	RTCA	92	54.971	ENSCING00000007875	-	94	54.971	Ciona_intestinalis
ENSFALG00000002443	RTCA	95	53.125	ENSCSAVG00000007269	-	97	53.125	Ciona_savignyi
ENSFALG00000002443	RTCA	90	83.784	ENSCANG00000040106	RTCA	91	83.784	Colobus_angolensis_palliatus
ENSFALG00000002443	RTCA	65	80.658	ENSCGRG00001013163	Rtca	77	80.658	Cricetulus_griseus_chok1gshd
ENSFALG00000002443	RTCA	88	67.584	ENSCSEG00000000530	rtca	89	67.584	Cynoglossus_semilaevis
ENSFALG00000002443	RTCA	91	53.913	ENSCVAG00000021809	rtca	93	53.913	Cyprinodon_variegatus
ENSFALG00000002443	RTCA	90	72.072	ENSDARG00000002215	rtca	91	72.072	Danio_rerio
ENSFALG00000002443	RTCA	91	80.588	ENSDNOG00000000456	RTCA	93	80.588	Dasypus_novemcinctus
ENSFALG00000002443	RTCA	91	82.353	ENSDORG00000005448	Rtca	93	82.353	Dipodomys_ordii
ENSFALG00000002443	RTCA	91	40.413	FBgn0025630	Rtca	94	40.413	Drosophila_melanogaster
ENSFALG00000002443	RTCA	88	57.357	ENSEBUG00000008556	rtca	90	57.357	Eptatretus_burgeri
ENSFALG00000002443	RTCA	91	82.059	ENSEASG00005015926	RTCA	93	82.059	Equus_asinus_asinus
ENSFALG00000002443	RTCA	91	82.059	ENSECAG00000019831	RTCA	93	82.059	Equus_caballus
ENSFALG00000002443	RTCA	90	73.988	ENSEEUG00000001165	RTCA	100	73.988	Erinaceus_europaeus
ENSFALG00000002443	RTCA	88	68.902	ENSELUG00000003741	rtca	90	68.902	Esox_lucius
ENSFALG00000002443	RTCA	91	82.059	ENSFCAG00000024460	RTCA	93	82.059	Felis_catus
ENSFALG00000002443	RTCA	91	81.471	ENSFDAG00000012070	-	93	81.471	Fukomys_damarensis
ENSFALG00000002443	RTCA	90	65.075	ENSFDAG00000016084	-	92	65.075	Fukomys_damarensis
ENSFALG00000002443	RTCA	54	69.000	ENSFHEG00000002868	rtca	92	65.728	Fundulus_heteroclitus
ENSFALG00000002443	RTCA	98	64.187	ENSGMOG00000013264	rtca	98	64.187	Gadus_morhua
ENSFALG00000002443	RTCA	90	93.093	ENSGALG00000005277	RTCA	91	93.093	Gallus_gallus
ENSFALG00000002443	RTCA	91	67.751	ENSGAFG00000011853	rtca	92	67.751	Gambusia_affinis
ENSFALG00000002443	RTCA	91	68.047	ENSGACG00000013497	rtca	93	68.047	Gasterosteus_aculeatus
ENSFALG00000002443	RTCA	79	90.102	ENSGAGG00000023306	RTCA	100	90.102	Gopherus_agassizii
ENSFALG00000002443	RTCA	90	84.084	ENSGGOG00000009546	-	91	84.084	Gorilla_gorilla
ENSFALG00000002443	RTCA	90	83.183	ENSGGOG00000044018	-	91	83.183	Gorilla_gorilla
ENSFALG00000002443	RTCA	91	67.456	ENSHBUG00000002114	rtca	92	67.456	Haplochromis_burtoni
ENSFALG00000002443	RTCA	91	80.882	ENSHGLG00000002617	RTCA	93	80.882	Heterocephalus_glaber_female
ENSFALG00000002443	RTCA	91	80.882	ENSHGLG00100006056	RTCA	93	80.882	Heterocephalus_glaber_male
ENSFALG00000002443	RTCA	95	61.190	ENSHCOG00000020628	rtca	87	61.190	Hippocampus_comes
ENSFALG00000002443	RTCA	90	71.772	ENSIPUG00000024803	rtca	91	71.772	Ictalurus_punctatus
ENSFALG00000002443	RTCA	91	71.848	ENSSTOG00000033099	-	93	71.848	Ictidomys_tridecemlineatus
ENSFALG00000002443	RTCA	91	75.000	ENSSTOG00000013528	-	93	75.000	Ictidomys_tridecemlineatus
ENSFALG00000002443	RTCA	91	59.118	ENSJJAG00000016178	Rtca	91	59.118	Jaculus_jaculus
ENSFALG00000002443	RTCA	91	68.235	ENSKMAG00000006651	rtca	93	68.235	Kryptolebias_marmoratus
ENSFALG00000002443	RTCA	79	67.918	ENSLBEG00000002448	-	91	67.918	Labrus_bergylta
ENSFALG00000002443	RTCA	90	67.868	ENSLBEG00000028971	rtca	91	67.868	Labrus_bergylta
ENSFALG00000002443	RTCA	90	75.075	ENSLACG00000013666	RTCA	91	75.075	Latimeria_chalumnae
ENSFALG00000002443	RTCA	91	68.639	ENSLOCG00000000093	rtca	92	68.639	Lepisosteus_oculatus
ENSFALG00000002443	RTCA	91	81.176	ENSLAFG00000001473	RTCA	93	81.176	Loxodonta_africana
ENSFALG00000002443	RTCA	90	84.084	ENSMFAG00000034132	RTCA	91	84.084	Macaca_fascicularis
ENSFALG00000002443	RTCA	90	84.084	ENSMMUG00000019105	RTCA	91	84.084	Macaca_mulatta
ENSFALG00000002443	RTCA	74	84.058	ENSMNEG00000037163	RTCA	89	84.058	Macaca_nemestrina
ENSFALG00000002443	RTCA	80	75.839	ENSMLEG00000042151	RTCA	89	75.839	Mandrillus_leucophaeus
ENSFALG00000002443	RTCA	91	70.118	ENSMAMG00000016536	rtca	93	70.118	Mastacembelus_armatus
ENSFALG00000002443	RTCA	91	67.456	ENSMZEG00005017945	rtca	92	67.456	Maylandia_zebra
ENSFALG00000002443	RTCA	77	93.706	ENSMGAG00000006892	RTCA	90	93.706	Meleagris_gallopavo
ENSFALG00000002443	RTCA	91	81.471	ENSMAUG00000008488	Rtca	93	81.471	Mesocricetus_auratus
ENSFALG00000002443	RTCA	76	81.625	ENSMICG00000008643	RTCA	92	81.625	Microcebus_murinus
ENSFALG00000002443	RTCA	91	82.353	ENSMOCG00000016660	Rtca	93	82.353	Microtus_ochrogaster
ENSFALG00000002443	RTCA	76	69.965	ENSMMOG00000007750	rtca	92	69.965	Mola_mola
ENSFALG00000002443	RTCA	91	81.471	ENSMODG00000003557	RTCA	93	81.471	Monodelphis_domestica
ENSFALG00000002443	RTCA	91	69.527	ENSMALG00000020844	rtca	93	69.527	Monopterus_albus
ENSFALG00000002443	RTCA	91	81.765	MGP_CAROLIEiJ_G0025565	Rtca	100	81.690	Mus_caroli
ENSFALG00000002443	RTCA	91	81.471	ENSMUSG00000000339	Rtca	100	81.690	Mus_musculus
ENSFALG00000002443	RTCA	91	82.059	MGP_PahariEiJ_G0027011	Rtca	100	82.394	Mus_pahari
ENSFALG00000002443	RTCA	91	81.471	MGP_SPRETEiJ_G0026515	Rtca	100	80.986	Mus_spretus
ENSFALG00000002443	RTCA	91	81.765	ENSMPUG00000012119	RTCA	93	81.765	Mustela_putorius_furo
ENSFALG00000002443	RTCA	91	77.126	ENSMLUG00000009922	RTCA	93	77.126	Myotis_lucifugus
ENSFALG00000002443	RTCA	91	80.882	ENSNGAG00000011540	Rtca	93	80.882	Nannospalax_galili
ENSFALG00000002443	RTCA	91	67.456	ENSNBRG00000003062	rtca	92	67.456	Neolamprologus_brichardi
ENSFALG00000002443	RTCA	90	84.084	ENSNLEG00000031426	RTCA	91	84.084	Nomascus_leucogenys
ENSFALG00000002443	RTCA	65	76.543	ENSOPRG00000012092	RTCA	64	76.543	Ochotona_princeps
ENSFALG00000002443	RTCA	87	81.988	ENSODEG00000006990	RTCA	89	82.154	Octodon_degus
ENSFALG00000002443	RTCA	91	67.751	ENSONIG00000007753	rtca	92	67.751	Oreochromis_niloticus
ENSFALG00000002443	RTCA	78	81.443	ENSOANG00000012055	RTCA	90	81.443	Ornithorhynchus_anatinus
ENSFALG00000002443	RTCA	91	81.765	ENSOCUG00000014247	RTCA	93	81.765	Oryctolagus_cuniculus
ENSFALG00000002443	RTCA	91	68.546	ENSORLG00000013605	rtca	98	68.546	Oryzias_latipes
ENSFALG00000002443	RTCA	91	68.546	ENSORLG00020001904	rtca	95	68.546	Oryzias_latipes_hni
ENSFALG00000002443	RTCA	91	68.249	ENSORLG00015021064	rtca	93	67.353	Oryzias_latipes_hsok
ENSFALG00000002443	RTCA	91	69.706	ENSOMEG00000000756	rtca	93	69.706	Oryzias_melastigma
ENSFALG00000002443	RTCA	91	72.941	ENSOGAG00000005627	RTCA	93	72.941	Otolemur_garnettii
ENSFALG00000002443	RTCA	78	81.507	ENSOARG00000018122	RTCA	92	81.507	Ovis_aries
ENSFALG00000002443	RTCA	90	80.925	ENSPPAG00000035119	RTCA	89	84.058	Pan_paniscus
ENSFALG00000002443	RTCA	91	82.059	ENSPPRG00000000350	RTCA	93	82.059	Panthera_pardus
ENSFALG00000002443	RTCA	91	81.765	ENSPTIG00000012816	RTCA	93	81.765	Panthera_tigris_altaica
ENSFALG00000002443	RTCA	90	80.636	ENSPTRG00000001004	RTCA	89	83.696	Pan_troglodytes
ENSFALG00000002443	RTCA	91	82.353	ENSPANG00000000346	RTCA	93	82.353	Papio_anubis
ENSFALG00000002443	RTCA	89	72.289	ENSPKIG00000001653	rtca	91	72.289	Paramormyrops_kingsleyae
ENSFALG00000002443	RTCA	90	90.390	ENSPSIG00000011408	RTCA	91	90.390	Pelodiscus_sinensis
ENSFALG00000002443	RTCA	91	81.765	ENSPEMG00000018582	Rtca	93	81.765	Peromyscus_maniculatus_bairdii
ENSFALG00000002443	RTCA	90	55.917	ENSPMAG00000009110	rtca	92	55.917	Petromyzon_marinus
ENSFALG00000002443	RTCA	91	82.647	ENSPCIG00000007684	RTCA	93	82.647	Phascolarctos_cinereus
ENSFALG00000002443	RTCA	91	68.142	ENSPFOG00000004824	rtca	93	68.142	Poecilia_formosa
ENSFALG00000002443	RTCA	91	68.343	ENSPLAG00000011753	rtca	92	68.343	Poecilia_latipinna
ENSFALG00000002443	RTCA	91	68.343	ENSPMEG00000020469	rtca	92	68.343	Poecilia_mexicana
ENSFALG00000002443	RTCA	90	69.670	ENSPREG00000001365	rtca	91	69.670	Poecilia_reticulata
ENSFALG00000002443	RTCA	90	83.784	ENSPPYG00000001115	RTCA	91	83.784	Pongo_abelii
ENSFALG00000002443	RTCA	90	80.000	ENSPCAG00000005076	RTCA	92	80.000	Procavia_capensis
ENSFALG00000002443	RTCA	90	84.384	ENSPCOG00000005603	RTCA	91	84.384	Propithecus_coquereli
ENSFALG00000002443	RTCA	91	77.904	ENSPVAG00000009478	RTCA	93	77.904	Pteropus_vampyrus
ENSFALG00000002443	RTCA	91	67.456	ENSPNYG00000004722	rtca	92	67.456	Pundamilia_nyererei
ENSFALG00000002443	RTCA	90	71.471	ENSPNAG00000022270	rtca	91	71.471	Pygocentrus_nattereri
ENSFALG00000002443	RTCA	91	82.059	ENSRNOG00000014575	Rtca	93	82.059	Rattus_norvegicus
ENSFALG00000002443	RTCA	90	80.347	ENSRBIG00000041180	RTCA	89	83.333	Rhinopithecus_bieti
ENSFALG00000002443	RTCA	90	83.483	ENSRROG00000024929	RTCA	91	83.483	Rhinopithecus_roxellana
ENSFALG00000002443	RTCA	90	82.883	ENSSBOG00000028626	RTCA	91	82.883	Saimiri_boliviensis_boliviensis
ENSFALG00000002443	RTCA	91	82.353	ENSSHAG00000001758	RTCA	93	82.353	Sarcophilus_harrisii
ENSFALG00000002443	RTCA	89	66.566	ENSSMAG00000014680	rtca	89	66.566	Scophthalmus_maximus
ENSFALG00000002443	RTCA	89	69.277	ENSSDUG00000015585	rtca	89	69.277	Seriola_dumerili
ENSFALG00000002443	RTCA	87	68.923	ENSSLDG00000018985	rtca	88	68.923	Seriola_lalandi_dorsalis
ENSFALG00000002443	RTCA	76	78.521	ENSSARG00000013993	RTCA	90	78.521	Sorex_araneus
ENSFALG00000002443	RTCA	91	68.935	ENSSPAG00000011938	rtca	92	68.935	Stegastes_partitus
ENSFALG00000002443	RTCA	91	82.647	ENSSSCG00000006865	RTCA	93	82.647	Sus_scrofa
ENSFALG00000002443	RTCA	90	98.799	ENSTGUG00000005154	RTCA	91	98.799	Taeniopygia_guttata
ENSFALG00000002443	RTCA	98	66.116	ENSTRUG00000008799	rtca	98	66.116	Takifugu_rubripes
ENSFALG00000002443	RTCA	98	65.840	ENSTNIG00000004725	rtca	98	65.840	Tetraodon_nigroviridis
ENSFALG00000002443	RTCA	91	77.337	ENSTTRG00000015327	RTCA	93	77.337	Tursiops_truncatus
ENSFALG00000002443	RTCA	90	82.985	ENSUAMG00000017265	RTCA	94	82.985	Ursus_americanus
ENSFALG00000002443	RTCA	91	81.471	ENSUMAG00000007881	RTCA	93	81.471	Ursus_maritimus
ENSFALG00000002443	RTCA	78	72.165	ENSVPAG00000001039	RTCA	77	72.165	Vicugna_pacos
ENSFALG00000002443	RTCA	91	81.765	ENSVVUG00000022041	RTCA	63	81.765	Vulpes_vulpes
ENSFALG00000002443	RTCA	91	62.974	ENSXETG00000031661	RTCA	93	62.974	Xenopus_tropicalis
ENSFALG00000002443	RTCA	91	59.118	ENSXCOG00000008002	rtca	93	59.118	Xiphophorus_couchianus
ENSFALG00000002443	RTCA	91	68.047	ENSXMAG00000005482	rtca	92	68.047	Xiphophorus_maculatus