EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000002547 (Gene tree)
Gene ID: -
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 49693 bases
Position: chrJH603184.1:2375723-2425415
Accession: 101813747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002649	PAP_RNA-bind	PF04926.15	5.4e-24	1	2
ENSFALP00000002649	PAP_RNA-bind	PF04926.15	5.4e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002661	PAPOLA-201	4453	XM_016298725	ENSFALP00000002649	774 (aa)	XP_016154211	U3JIP5

Gene Model

Click here to download ENSFALG00000002547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000002547	PAPOLA	97	54.734	ENSFALG00000011079	PAPOLG	70	68.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002547	PAPOLA	98	87.337	ENSG00000090060	PAPOLA	97	96.739	Homo_sapiens
ENSFALG00000002547	PAPOLA	98	88.042	ENSAMEG00000014142	PAPOLA	99	88.436	Ailuropoda_melanoleuca
ENSFALG00000002547	PAPOLA	98	93.578	ENSAPLG00000006645	PAPOLA	100	93.578	Anas_platyrhynchos
ENSFALG00000002547	PAPOLA	99	88.312	ENSACAG00000013474	PAPOLA	99	94.970	Anolis_carolinensis
ENSFALG00000002547	PAPOLA	68	89.077	ENSANAG00000027941	-	98	89.077	Aotus_nancymaae
ENSFALG00000002547	PAPOLA	98	87.206	ENSANAG00000018274	PAPOLA	99	96.507	Aotus_nancymaae
ENSFALG00000002547	PAPOLA	98	68.511	ENSAMXG00000018141	papola	97	86.085	Astyanax_mexicanus
ENSFALG00000002547	PAPOLA	98	87.632	ENSBTAG00000004054	PAPOLA	99	93.750	Bos_taurus
ENSFALG00000002547	PAPOLA	98	87.076	ENSCJAG00000006512	PAPOLA	99	96.507	Callithrix_jacchus
ENSFALG00000002547	PAPOLA	99	87.827	ENSCAFG00000017783	PAPOLA	99	88.220	Canis_familiaris
ENSFALG00000002547	PAPOLA	98	88.011	ENSCAFG00020011550	PAPOLA	96	96.642	Canis_lupus_dingo
ENSFALG00000002547	PAPOLA	98	87.467	ENSCHIG00000025004	-	97	94.643	Capra_hircus
ENSFALG00000002547	PAPOLA	98	87.402	ENSTSYG00000012384	PAPOLA	99	93.750	Carlito_syrichta
ENSFALG00000002547	PAPOLA	91	93.750	ENSCPOG00000002648	PAPOLA	99	93.750	Cavia_porcellus
ENSFALG00000002547	PAPOLA	98	87.206	ENSCCAG00000025120	PAPOLA	100	93.750	Cebus_capucinus
ENSFALG00000002547	PAPOLA	98	87.337	ENSCATG00000018815	PAPOLA	99	96.834	Cercocebus_atys
ENSFALG00000002547	PAPOLA	98	87.763	ENSCLAG00000016342	PAPOLA	99	93.750	Chinchilla_lanigera
ENSFALG00000002547	PAPOLA	98	87.337	ENSCSAG00000010516	PAPOLA	99	87.859	Chlorocebus_sabaeus
ENSFALG00000002547	PAPOLA	71	78.395	ENSCHOG00000001115	PAPOLA	71	78.395	Choloepus_hoffmanni
ENSFALG00000002547	PAPOLA	96	90.629	ENSCPBG00000024125	PAPOLA	99	90.539	Chrysemys_picta_bellii
ENSFALG00000002547	PAPOLA	98	82.376	ENSCANG00000000159	PAPOLA	99	82.898	Colobus_angolensis_palliatus
ENSFALG00000002547	PAPOLA	98	77.602	ENSCGRG00001002732	-	97	81.388	Cricetulus_griseus_chok1gshd
ENSFALG00000002547	PAPOLA	98	88.026	ENSCGRG00001022693	-	99	93.750	Cricetulus_griseus_chok1gshd
ENSFALG00000002547	PAPOLA	98	81.053	ENSCGRG00001000229	-	99	86.872	Cricetulus_griseus_chok1gshd
ENSFALG00000002547	PAPOLA	98	74.211	ENSCGRG00000000257	-	99	74.211	Cricetulus_griseus_crigri
ENSFALG00000002547	PAPOLA	96	74.400	ENSCGRG00000001888	-	96	74.400	Cricetulus_griseus_crigri
ENSFALG00000002547	PAPOLA	98	88.026	ENSCGRG00000003664	-	100	93.750	Cricetulus_griseus_crigri
ENSFALG00000002547	PAPOLA	63	52.749	ENSCSEG00000001841	-	72	52.749	Cynoglossus_semilaevis
ENSFALG00000002547	PAPOLA	98	68.057	ENSDARG00000009585	papola	99	67.487	Danio_rerio
ENSFALG00000002547	PAPOLA	66	80.117	ENSDORG00000013415	-	100	80.312	Dipodomys_ordii
ENSFALG00000002547	PAPOLA	98	76.447	ENSETEG00000004889	PAPOLA	100	76.447	Echinops_telfairi
ENSFALG00000002547	PAPOLA	98	66.972	ENSELUG00000018972	papola	99	67.104	Esox_lucius
ENSFALG00000002547	PAPOLA	98	88.158	ENSFCAG00000006784	PAPOLA	99	93.750	Felis_catus
ENSFALG00000002547	PAPOLA	98	86.877	ENSFDAG00000010370	PAPOLA	100	96.774	Fukomys_damarensis
ENSFALG00000002547	PAPOLA	73	63.139	ENSGMOG00000010209	papola	100	63.158	Gadus_morhua
ENSFALG00000002547	PAPOLA	98	93.808	ENSGALG00000033099	PAPOLA	99	93.808	Gallus_gallus
ENSFALG00000002547	PAPOLA	62	55.000	ENSGACG00000006142	-	100	54.583	Gasterosteus_aculeatus
ENSFALG00000002547	PAPOLA	83	95.194	ENSGAGG00000020500	PAPOLA	99	95.144	Gopherus_agassizii
ENSFALG00000002547	PAPOLA	98	87.337	ENSGGOG00000006287	PAPOLA	99	93.750	Gorilla_gorilla
ENSFALG00000002547	PAPOLA	98	87.763	ENSHGLG00000007909	-	99	93.750	Heterocephalus_glaber_female
ENSFALG00000002547	PAPOLA	91	86.842	ENSHGLG00000007467	-	99	71.842	Heterocephalus_glaber_female
ENSFALG00000002547	PAPOLA	98	76.649	ENSHGLG00000017457	-	100	76.253	Heterocephalus_glaber_female
ENSFALG00000002547	PAPOLA	98	87.632	ENSHGLG00100017273	PAPOLA	99	93.750	Heterocephalus_glaber_male
ENSFALG00000002547	PAPOLA	98	65.012	ENSIPUG00000005919	papola	99	64.684	Ictalurus_punctatus
ENSFALG00000002547	PAPOLA	98	87.763	ENSSTOG00000011471	PAPOLA	99	93.750	Ictidomys_tridecemlineatus
ENSFALG00000002547	PAPOLA	98	87.895	ENSJJAG00000024340	Papola	100	93.750	Jaculus_jaculus
ENSFALG00000002547	PAPOLA	98	73.307	ENSLACG00000018136	PAPOLA	100	73.307	Latimeria_chalumnae
ENSFALG00000002547	PAPOLA	98	64.332	ENSLOCG00000008632	papola	99	64.332	Lepisosteus_oculatus
ENSFALG00000002547	PAPOLA	98	87.680	ENSLAFG00000000946	PAPOLA	100	87.680	Loxodonta_africana
ENSFALG00000002547	PAPOLA	98	87.337	ENSMFAG00000001792	PAPOLA	99	96.673	Macaca_fascicularis
ENSFALG00000002547	PAPOLA	98	87.337	ENSMMUG00000018610	PAPOLA	99	93.750	Macaca_mulatta
ENSFALG00000002547	PAPOLA	98	87.337	ENSMNEG00000043747	PAPOLA	99	95.588	Macaca_nemestrina
ENSFALG00000002547	PAPOLA	98	87.337	ENSMLEG00000032066	PAPOLA	99	93.750	Mandrillus_leucophaeus
ENSFALG00000002547	PAPOLA	83	93.012	ENSMGAG00000013228	-	100	93.012	Meleagris_gallopavo
ENSFALG00000002547	PAPOLA	98	88.684	ENSMAUG00000017178	Papola	99	93.750	Mesocricetus_auratus
ENSFALG00000002547	PAPOLA	98	88.026	ENSMICG00000010347	PAPOLA	98	96.660	Microcebus_murinus
ENSFALG00000002547	PAPOLA	98	88.436	ENSMOCG00000021670	Papola	99	93.750	Microtus_ochrogaster
ENSFALG00000002547	PAPOLA	98	76.209	ENSMODG00000001969	-	99	76.078	Monodelphis_domestica
ENSFALG00000002547	PAPOLA	98	89.211	ENSMODG00000012887	-	99	89.211	Monodelphis_domestica
ENSFALG00000002547	PAPOLA	98	87.237	MGP_CAROLIEiJ_G0018093	Papola	99	93.750	Mus_caroli
ENSFALG00000002547	PAPOLA	98	87.368	ENSMUSG00000021111	Papola	99	93.750	Mus_musculus
ENSFALG00000002547	PAPOLA	98	87.368	MGP_PahariEiJ_G0029850	Papola	99	93.750	Mus_pahari
ENSFALG00000002547	PAPOLA	98	87.368	MGP_SPRETEiJ_G0018943	Papola	99	93.750	Mus_spretus
ENSFALG00000002547	PAPOLA	98	88.026	ENSMPUG00000003054	PAPOLA	99	88.421	Mustela_putorius_furo
ENSFALG00000002547	PAPOLA	98	87.105	ENSMLUG00000010922	PAPOLA	99	87.632	Myotis_lucifugus
ENSFALG00000002547	PAPOLA	98	87.368	ENSNGAG00000022172	Papola	99	93.750	Nannospalax_galili
ENSFALG00000002547	PAPOLA	91	93.750	ENSNLEG00000000625	PAPOLA	99	93.750	Nomascus_leucogenys
ENSFALG00000002547	PAPOLA	67	62.500	ENSMEUG00000007831	-	74	62.500	Notamacropus_eugenii
ENSFALG00000002547	PAPOLA	96	83.758	ENSOPRG00000007625	PAPOLA	100	83.758	Ochotona_princeps
ENSFALG00000002547	PAPOLA	63	53.564	ENSONIG00000001062	-	99	53.564	Oreochromis_niloticus
ENSFALG00000002547	PAPOLA	92	93.750	ENSOANG00000013812	PAPOLA	100	93.750	Ornithorhynchus_anatinus
ENSFALG00000002547	PAPOLA	98	85.340	ENSOCUG00000011531	PAPOLA	100	85.864	Oryctolagus_cuniculus
ENSFALG00000002547	PAPOLA	98	88.305	ENSOGAG00000004611	PAPOLA	99	88.830	Otolemur_garnettii
ENSFALG00000002547	PAPOLA	99	87.304	ENSOARG00000016579	-	99	88.173	Ovis_aries
ENSFALG00000002547	PAPOLA	98	87.337	ENSPPAG00000030505	PAPOLA	99	93.750	Pan_paniscus
ENSFALG00000002547	PAPOLA	98	88.158	ENSPPRG00000008616	PAPOLA	99	88.684	Panthera_pardus
ENSFALG00000002547	PAPOLA	98	88.158	ENSPTIG00000018852	PAPOLA	99	88.684	Panthera_tigris_altaica
ENSFALG00000002547	PAPOLA	98	87.337	ENSPTRG00000006704	PAPOLA	99	93.750	Pan_troglodytes
ENSFALG00000002547	PAPOLA	98	87.337	ENSPANG00000025582	PAPOLA	98	96.834	Papio_anubis
ENSFALG00000002547	PAPOLA	99	68.490	ENSPKIG00000014471	papola	99	70.210	Paramormyrops_kingsleyae
ENSFALG00000002547	PAPOLA	96	89.692	ENSPSIG00000014157	PAPOLA	88	88.586	Pelodiscus_sinensis
ENSFALG00000002547	PAPOLA	96	88.606	ENSPEMG00000000043	Papola	99	93.750	Peromyscus_maniculatus_bairdii
ENSFALG00000002547	PAPOLA	98	89.211	ENSPCIG00000013234	PAPOLA	99	92.690	Phascolarctos_cinereus
ENSFALG00000002547	PAPOLA	98	85.117	ENSPPYG00000006128	PAPOLA	99	85.640	Pongo_abelii
ENSFALG00000002547	PAPOLA	88	83.529	ENSPCAG00000004199	PAPOLA	100	83.529	Procavia_capensis
ENSFALG00000002547	PAPOLA	92	93.750	ENSPCOG00000022117	PAPOLA	99	93.750	Propithecus_coquereli
ENSFALG00000002547	PAPOLA	98	86.842	ENSPVAG00000013925	PAPOLA	99	87.368	Pteropus_vampyrus
ENSFALG00000002547	PAPOLA	98	68.775	ENSPNAG00000010467	papola	99	69.170	Pygocentrus_nattereri
ENSFALG00000002547	PAPOLA	98	87.105	ENSRNOG00000004827	Papola	99	87.105	Rattus_norvegicus
ENSFALG00000002547	PAPOLA	91	93.750	ENSRBIG00000038490	PAPOLA	97	95.857	Rhinopithecus_bieti
ENSFALG00000002547	PAPOLA	98	87.337	ENSRROG00000025545	PAPOLA	99	87.859	Rhinopithecus_roxellana
ENSFALG00000002547	PAPOLA	98	87.093	ENSSBOG00000024061	PAPOLA	97	96.610	Saimiri_boliviensis_boliviensis
ENSFALG00000002547	PAPOLA	98	89.079	ENSSHAG00000015211	PAPOLA	100	88.729	Sarcophilus_harrisii
ENSFALG00000002547	PAPOLA	96	69.839	ENSSFOG00015004431	papola	98	85.635	Scleropages_formosus
ENSFALG00000002547	PAPOLA	64	57.344	ENSSDUG00000018247	-	74	57.344	Seriola_dumerili
ENSFALG00000002547	PAPOLA	96	89.439	ENSSPUG00000005835	PAPOLA	99	89.501	Sphenodon_punctatus
ENSFALG00000002547	PAPOLA	98	87.763	ENSSSCG00000002505	-	99	93.750	Sus_scrofa
ENSFALG00000002547	PAPOLA	98	96.443	ENSTGUG00000012687	PAPOLA	99	96.443	Taeniopygia_guttata
ENSFALG00000002547	PAPOLA	74	86.957	ENSTBEG00000000194	PAPOLA	74	86.957	Tupaia_belangeri
ENSFALG00000002547	PAPOLA	79	87.791	ENSTTRG00000005717	PAPOLA	80	87.791	Tursiops_truncatus
ENSFALG00000002547	PAPOLA	55	96.235	ENSUAMG00000025737	PAPOLA	99	96.235	Ursus_americanus
ENSFALG00000002547	PAPOLA	98	87.879	ENSVPAG00000006464	PAPOLA	100	88.406	Vicugna_pacos
ENSFALG00000002547	PAPOLA	98	88.026	ENSVVUG00000028340	PAPOLA	99	93.750	Vulpes_vulpes
ENSFALG00000002547	PAPOLA	98	79.315	ENSXETG00000013949	papola	99	79.315	Xenopus_tropicalis