EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002580 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 9419 bases
Position: chrJH603197.1:2938696-2948114
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002684	RRM_1	PF00076.22	8.2e-12	1	1
ENSFALP00000002685	RRM_1	PF00076.22	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002696	RNPC3-201	1347	-	ENSFALP00000002684	449 (aa)	-	U3JIT0
ENSFALT00000002697	RNPC3-202	627	-	ENSFALP00000002685	209 (aa)	-	U3JIT1

Gene Model

Click here to download ENSFALG00000002580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002580	RNPC3	99	71.770	ENSG00000185946	RNPC3	100	68.571	Homo_sapiens
ENSFALG00000002580	RNPC3	99	57.619	ENSAPOG00000017371	rnpc3	89	55.654	Acanthochromis_polyacanthus
ENSFALG00000002580	RNPC3	99	73.684	ENSAMEG00000001694	RNPC3	87	71.868	Ailuropoda_melanoleuca
ENSFALG00000002580	RNPC3	99	54.378	ENSACIG00000021043	rnpc3	89	54.013	Amphilophus_citrinellus
ENSFALG00000002580	RNPC3	99	56.744	ENSAOCG00000014052	rnpc3	87	55.022	Amphiprion_ocellaris
ENSFALG00000002580	RNPC3	99	56.744	ENSAPEG00000008739	rnpc3	87	54.803	Amphiprion_percula
ENSFALG00000002580	RNPC3	99	56.681	ENSATEG00000021263	rnpc3	89	57.328	Anabas_testudineus
ENSFALG00000002580	RNPC3	100	91.537	ENSAPLG00000015605	RNPC3	100	91.537	Anas_platyrhynchos
ENSFALG00000002580	RNPC3	98	76.126	ENSACAG00000002029	RNPC3	88	74.667	Anolis_carolinensis
ENSFALG00000002580	RNPC3	99	71.292	ENSANAG00000019950	RNPC3	87	70.705	Aotus_nancymaae
ENSFALG00000002580	RNPC3	99	56.125	ENSACLG00000014702	rnpc3	89	56.696	Astatotilapia_calliptera
ENSFALG00000002580	RNPC3	99	59.223	ENSAMXG00000033372	rnpc3	89	55.604	Astyanax_mexicanus
ENSFALG00000002580	RNPC3	99	71.698	ENSBTAG00000019091	RNPC3	87	71.145	Bos_taurus
ENSFALG00000002580	RNPC3	99	72.249	ENSCJAG00000035686	RNPC3	87	68.943	Callithrix_jacchus
ENSFALG00000002580	RNPC3	99	71.770	ENSCAFG00000019972	RNPC3	87	71.366	Canis_familiaris
ENSFALG00000002580	RNPC3	99	72.249	ENSCAFG00020011300	RNPC3	87	71.586	Canis_lupus_dingo
ENSFALG00000002580	RNPC3	99	72.170	ENSCHIG00000020361	RNPC3	87	71.145	Capra_hircus
ENSFALG00000002580	RNPC3	99	69.856	ENSTSYG00000030256	RNPC3	87	70.264	Carlito_syrichta
ENSFALG00000002580	RNPC3	91	71.134	ENSCAPG00000013600	RNPC3	97	63.341	Cavia_aperea
ENSFALG00000002580	RNPC3	99	72.642	ENSCPOG00000031638	RNPC3	87	72.247	Cavia_porcellus
ENSFALG00000002580	RNPC3	99	71.770	ENSCCAG00000024301	RNPC3	87	71.366	Cebus_capucinus
ENSFALG00000002580	RNPC3	100	71.429	ENSCATG00000002086	RNPC3	87	71.868	Cercocebus_atys
ENSFALG00000002580	RNPC3	99	67.788	ENSCATG00000035930	-	88	61.962	Cercocebus_atys
ENSFALG00000002580	RNPC3	99	70.813	ENSCLAG00000005169	RNPC3	87	70.264	Chinchilla_lanigera
ENSFALG00000002580	RNPC3	100	71.429	ENSCSAG00000001519	RNPC3	87	71.209	Chlorocebus_sabaeus
ENSFALG00000002580	RNPC3	100	80.310	ENSCPBG00000028311	RNPC3	88	81.637	Chrysemys_picta_bellii
ENSFALG00000002580	RNPC3	98	36.726	ENSCING00000021276	-	90	38.022	Ciona_intestinalis
ENSFALG00000002580	RNPC3	98	35.294	ENSCSAVG00000002800	-	91	35.491	Ciona_savignyi
ENSFALG00000002580	RNPC3	100	71.429	ENSCANG00000031444	RNPC3	87	71.648	Colobus_angolensis_palliatus
ENSFALG00000002580	RNPC3	99	69.811	ENSCGRG00001019276	Rnpc3	88	70.925	Cricetulus_griseus_chok1gshd
ENSFALG00000002580	RNPC3	99	69.811	ENSCGRG00000000053	Rnpc3	100	70.925	Cricetulus_griseus_crigri
ENSFALG00000002580	RNPC3	99	57.079	ENSCSEG00000013475	rnpc3	88	57.079	Cynoglossus_semilaevis
ENSFALG00000002580	RNPC3	99	53.680	ENSCVAG00000002645	rnpc3	89	54.329	Cyprinodon_variegatus
ENSFALG00000002580	RNPC3	99	59.070	ENSDARG00000011247	rnpc3	94	62.857	Danio_rerio
ENSFALG00000002580	RNPC3	99	73.206	ENSDNOG00000047498	-	87	71.586	Dasypus_novemcinctus
ENSFALG00000002580	RNPC3	99	72.249	ENSDNOG00000044555	-	87	71.806	Dasypus_novemcinctus
ENSFALG00000002580	RNPC3	100	71.292	ENSDORG00000027343	Rnpc3	88	70.640	Dipodomys_ordii
ENSFALG00000002580	RNPC3	100	52.857	ENSEBUG00000002068	rnpc3	90	47.146	Eptatretus_burgeri
ENSFALG00000002580	RNPC3	99	73.077	ENSEASG00005015957	RNPC3	87	72.687	Equus_asinus_asinus
ENSFALG00000002580	RNPC3	99	72.596	ENSECAG00000021148	RNPC3	87	72.467	Equus_caballus
ENSFALG00000002580	RNPC3	99	55.106	ENSELUG00000002264	rnpc3	89	55.106	Esox_lucius
ENSFALG00000002580	RNPC3	99	73.206	ENSFCAG00000024312	RNPC3	87	72.467	Felis_catus
ENSFALG00000002580	RNPC3	99	72.170	ENSFDAG00000019948	RNPC3	88	71.806	Fukomys_damarensis
ENSFALG00000002580	RNPC3	99	51.902	ENSFHEG00000020647	rnpc3	88	51.454	Fundulus_heteroclitus
ENSFALG00000002580	RNPC3	99	54.808	ENSGMOG00000019213	rnpc3	87	54.324	Gadus_morhua
ENSFALG00000002580	RNPC3	100	91.537	ENSGALG00000005162	RNPC3	82	91.537	Gallus_gallus
ENSFALG00000002580	RNPC3	99	55.195	ENSGAFG00000017236	rnpc3	89	55.195	Gambusia_affinis
ENSFALG00000002580	RNPC3	99	56.954	ENSGACG00000002048	rnpc3	89	55.940	Gasterosteus_aculeatus
ENSFALG00000002580	RNPC3	100	80.973	ENSGAGG00000008438	RNPC3	87	81.416	Gopherus_agassizii
ENSFALG00000002580	RNPC3	99	63.942	ENSGGOG00000026201	-	86	60.045	Gorilla_gorilla
ENSFALG00000002580	RNPC3	99	54.067	ENSHBUG00000015966	rnpc3	74	54.645	Haplochromis_burtoni
ENSFALG00000002580	RNPC3	99	72.249	ENSHGLG00000001708	RNPC3	87	70.925	Heterocephalus_glaber_female
ENSFALG00000002580	RNPC3	99	72.249	ENSHGLG00100003005	RNPC3	87	70.925	Heterocephalus_glaber_male
ENSFALG00000002580	RNPC3	99	56.132	ENSHCOG00000017135	rnpc3	89	54.825	Hippocampus_comes
ENSFALG00000002580	RNPC3	97	62.376	ENSIPUG00000002916	rnpc3	88	57.079	Ictalurus_punctatus
ENSFALG00000002580	RNPC3	99	73.113	ENSSTOG00000025020	RNPC3	87	71.806	Ictidomys_tridecemlineatus
ENSFALG00000002580	RNPC3	99	70.813	ENSJJAG00000010203	Rnpc3	88	71.302	Jaculus_jaculus
ENSFALG00000002580	RNPC3	99	56.291	ENSKMAG00000017358	rnpc3	89	56.291	Kryptolebias_marmoratus
ENSFALG00000002580	RNPC3	99	57.143	ENSLBEG00000024901	rnpc3	87	56.484	Labrus_bergylta
ENSFALG00000002580	RNPC3	100	67.757	ENSLACG00000005720	RNPC3	83	65.121	Latimeria_chalumnae
ENSFALG00000002580	RNPC3	99	63.158	ENSLOCG00000007986	rnpc3	89	61.810	Lepisosteus_oculatus
ENSFALG00000002580	RNPC3	99	71.770	ENSLAFG00000032342	RNPC3	88	71.586	Loxodonta_africana
ENSFALG00000002580	RNPC3	99	65.865	ENSMFAG00000002917	-	87	60.671	Macaca_fascicularis
ENSFALG00000002580	RNPC3	100	70.952	ENSMFAG00000002004	RNPC3	87	71.648	Macaca_fascicularis
ENSFALG00000002580	RNPC3	99	66.346	ENSMMUG00000002098	-	76	68.269	Macaca_mulatta
ENSFALG00000002580	RNPC3	100	70.952	ENSMMUG00000018039	RNPC3	87	71.429	Macaca_mulatta
ENSFALG00000002580	RNPC3	100	64.615	ENSMNEG00000033950	RNPC3	87	65.275	Macaca_nemestrina
ENSFALG00000002580	RNPC3	99	65.865	ENSMNEG00000029209	-	86	60.957	Macaca_nemestrina
ENSFALG00000002580	RNPC3	100	71.429	ENSMLEG00000033628	RNPC3	87	71.868	Mandrillus_leucophaeus
ENSFALG00000002580	RNPC3	99	66.346	ENSMLEG00000034644	-	88	58.920	Mandrillus_leucophaeus
ENSFALG00000002580	RNPC3	99	52.535	ENSMAMG00000007496	rnpc3	89	52.484	Mastacembelus_armatus
ENSFALG00000002580	RNPC3	99	54.741	ENSMZEG00005020233	rnpc3	89	54.741	Maylandia_zebra
ENSFALG00000002580	RNPC3	100	91.209	ENSMGAG00000006381	RNPC3	100	91.209	Meleagris_gallopavo
ENSFALG00000002580	RNPC3	99	71.770	ENSMAUG00000001358	Rnpc3	88	69.095	Mesocricetus_auratus
ENSFALG00000002580	RNPC3	99	71.770	ENSMICG00000029591	RNPC3	87	72.026	Microcebus_murinus
ENSFALG00000002580	RNPC3	99	73.206	ENSMOCG00000013423	Rnpc3	87	71.366	Microtus_ochrogaster
ENSFALG00000002580	RNPC3	99	53.555	ENSMMOG00000005309	rnpc3	88	53.880	Mola_mola
ENSFALG00000002580	RNPC3	100	74.000	ENSMODG00000002946	RNPC3	88	74.444	Monodelphis_domestica
ENSFALG00000002580	RNPC3	99	52.752	ENSMALG00000015471	rnpc3	89	53.377	Monopterus_albus
ENSFALG00000002580	RNPC3	99	70.673	MGP_CAROLIEiJ_G0025555	Rnpc3	89	70.861	Mus_caroli
ENSFALG00000002580	RNPC3	99	72.115	ENSMUSG00000027981	Rnpc3	97	71.082	Mus_musculus
ENSFALG00000002580	RNPC3	99	71.154	MGP_PahariEiJ_G0027001	Rnpc3	89	70.861	Mus_pahari
ENSFALG00000002580	RNPC3	99	71.635	MGP_SPRETEiJ_G0026505	Rnpc3	89	70.640	Mus_spretus
ENSFALG00000002580	RNPC3	99	72.727	ENSMPUG00000007349	RNPC3	87	71.586	Mustela_putorius_furo
ENSFALG00000002580	RNPC3	99	71.226	ENSMLUG00000028743	RNPC3	87	71.586	Myotis_lucifugus
ENSFALG00000002580	RNPC3	99	71.698	ENSNGAG00000010939	Rnpc3	88	72.026	Nannospalax_galili
ENSFALG00000002580	RNPC3	99	55.902	ENSNBRG00000012196	rnpc3	86	56.473	Neolamprologus_brichardi
ENSFALG00000002580	RNPC3	99	71.770	ENSNLEG00000012013	RNPC3	87	71.806	Nomascus_leucogenys
ENSFALG00000002580	RNPC3	99	73.206	ENSODEG00000007612	RNPC3	87	72.247	Octodon_degus
ENSFALG00000002580	RNPC3	99	55.531	ENSONIG00000004770	rnpc3	92	55.752	Oreochromis_niloticus
ENSFALG00000002580	RNPC3	100	76.667	ENSOANG00000008220	RNPC3	97	75.385	Ornithorhynchus_anatinus
ENSFALG00000002580	RNPC3	99	73.206	ENSOCUG00000004016	RNPC3	88	71.366	Oryctolagus_cuniculus
ENSFALG00000002580	RNPC3	99	56.459	ENSORLG00000005694	rnpc3	89	54.911	Oryzias_latipes
ENSFALG00000002580	RNPC3	99	56.459	ENSORLG00020005513	rnpc3	89	55.778	Oryzias_latipes_hni
ENSFALG00000002580	RNPC3	99	56.938	ENSORLG00015002179	rnpc3	89	55.556	Oryzias_latipes_hsok
ENSFALG00000002580	RNPC3	99	56.731	ENSOMEG00000017737	rnpc3	89	54.788	Oryzias_melastigma
ENSFALG00000002580	RNPC3	99	72.115	ENSOGAG00000026182	RNPC3	87	71.744	Otolemur_garnettii
ENSFALG00000002580	RNPC3	99	72.170	ENSOARG00000018719	RNPC3	87	71.145	Ovis_aries
ENSFALG00000002580	RNPC3	99	64.904	ENSPPAG00000030278	-	88	60.938	Pan_paniscus
ENSFALG00000002580	RNPC3	99	71.770	ENSPPAG00000037459	RNPC3	87	71.868	Pan_paniscus
ENSFALG00000002580	RNPC3	99	73.206	ENSPPRG00000020246	RNPC3	87	72.687	Panthera_pardus
ENSFALG00000002580	RNPC3	99	73.206	ENSPTIG00000009887	RNPC3	89	72.687	Panthera_tigris_altaica
ENSFALG00000002580	RNPC3	99	71.770	ENSPTRG00000033902	RNPC3	87	71.806	Pan_troglodytes
ENSFALG00000002580	RNPC3	99	65.385	ENSPTRG00000044227	-	88	60.134	Pan_troglodytes
ENSFALG00000002580	RNPC3	100	71.429	ENSPANG00000012137	RNPC3	87	71.868	Papio_anubis
ENSFALG00000002580	RNPC3	99	65.385	ENSPANG00000029957	-	91	58.257	Papio_anubis
ENSFALG00000002580	RNPC3	98	56.473	ENSPKIG00000008828	rnpc3	87	54.911	Paramormyrops_kingsleyae
ENSFALG00000002580	RNPC3	72	36.667	ENSPSIG00000003931	RBM41	56	36.667	Pelodiscus_sinensis
ENSFALG00000002580	RNPC3	100	78.774	ENSPSIG00000007396	RNPC3	100	81.402	Pelodiscus_sinensis
ENSFALG00000002580	RNPC3	100	52.061	ENSPMGG00000011742	rnpc3	89	52.278	Periophthalmus_magnuspinnatus
ENSFALG00000002580	RNPC3	99	71.292	ENSPEMG00000020112	Rnpc3	100	70.485	Peromyscus_maniculatus_bairdii
ENSFALG00000002580	RNPC3	99	51.887	ENSPMAG00000003778	rnpc3	89	46.624	Petromyzon_marinus
ENSFALG00000002580	RNPC3	100	73.778	ENSPCIG00000004415	-	88	74.222	Phascolarctos_cinereus
ENSFALG00000002580	RNPC3	99	53.953	ENSPFOG00000009895	rnpc3	89	55.263	Poecilia_formosa
ENSFALG00000002580	RNPC3	99	54.245	ENSPLAG00000012023	rnpc3	89	54.605	Poecilia_latipinna
ENSFALG00000002580	RNPC3	99	53.953	ENSPMEG00000003663	rnpc3	89	55.482	Poecilia_mexicana
ENSFALG00000002580	RNPC3	99	53.774	ENSPREG00000010206	rnpc3	89	55.044	Poecilia_reticulata
ENSFALG00000002580	RNPC3	82	62.634	ENSPPYG00000001102	RNPC3	84	63.441	Pongo_abelii
ENSFALG00000002580	RNPC3	55	39.130	ENSPNYG00000012687	rbm41	57	30.738	Pundamilia_nyererei
ENSFALG00000002580	RNPC3	99	55.902	ENSPNYG00000020603	rnpc3	89	56.473	Pundamilia_nyererei
ENSFALG00000002580	RNPC3	99	61.165	ENSPNAG00000000524	rnpc3	81	52.444	Pygocentrus_nattereri
ENSFALG00000002580	RNPC3	99	71.292	ENSRNOG00000017310	Rnpc3	88	69.824	Rattus_norvegicus
ENSFALG00000002580	RNPC3	100	64.254	ENSRBIG00000043897	RNPC3	87	64.693	Rhinopithecus_bieti
ENSFALG00000002580	RNPC3	100	71.429	ENSRROG00000032334	RNPC3	87	71.868	Rhinopithecus_roxellana
ENSFALG00000002580	RNPC3	99	71.292	ENSSBOG00000024473	RNPC3	88	70.925	Saimiri_boliviensis_boliviensis
ENSFALG00000002580	RNPC3	100	72.747	ENSSHAG00000011859	RNPC3	88	73.187	Sarcophilus_harrisii
ENSFALG00000002580	RNPC3	99	60.185	ENSSFOG00015013055	rnpc3	90	58.929	Scleropages_formosus
ENSFALG00000002580	RNPC3	99	54.762	ENSSMAG00000020346	rnpc3	89	55.292	Scophthalmus_maximus
ENSFALG00000002580	RNPC3	99	55.940	ENSSDUG00000006600	rnpc3	89	55.940	Seriola_dumerili
ENSFALG00000002580	RNPC3	99	55.292	ENSSLDG00000007979	rnpc3	89	56.156	Seriola_lalandi_dorsalis
ENSFALG00000002580	RNPC3	99	72.768	ENSSPUG00000003872	-	84	72.768	Sphenodon_punctatus
ENSFALG00000002580	RNPC3	98	80.000	ENSSPUG00000008539	-	85	80.000	Sphenodon_punctatus
ENSFALG00000002580	RNPC3	99	57.416	ENSSPAG00000005633	rnpc3	89	56.222	Stegastes_partitus
ENSFALG00000002580	RNPC3	99	72.249	ENSSSCG00000037254	RNPC3	87	71.366	Sus_scrofa
ENSFALG00000002580	RNPC3	100	97.550	ENSTGUG00000004795	-	100	97.550	Taeniopygia_guttata
ENSFALG00000002580	RNPC3	100	97.608	ENSTGUG00000016137	-	100	97.608	Taeniopygia_guttata
ENSFALG00000002580	RNPC3	79	59.639	ENSTRUG00000001130	-	98	59.639	Takifugu_rubripes
ENSFALG00000002580	RNPC3	99	57.820	ENSTNIG00000018963	rnpc3	89	56.954	Tetraodon_nigroviridis
ENSFALG00000002580	RNPC3	99	73.206	ENSUMAG00000007775	RNPC3	89	72.026	Ursus_maritimus
ENSFALG00000002580	RNPC3	99	72.249	ENSVVUG00000000331	RNPC3	87	71.586	Vulpes_vulpes
ENSFALG00000002580	RNPC3	100	59.330	ENSXETG00000025027	rnpc3	89	50.947	Xenopus_tropicalis
ENSFALG00000002580	RNPC3	99	53.810	ENSXCOG00000005013	rnpc3	89	54.466	Xiphophorus_couchianus
ENSFALG00000002580	RNPC3	99	54.803	ENSXMAG00000006495	rnpc3	89	54.803	Xiphophorus_maculatus