EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000002594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 6036 bases
Position: chrJH603485.1:175634-181669
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002702	MMR_HSR1	PF01926.23	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002714	-	783	-	ENSFALP00000002702	235 (aa)	-	U3JIU8

Gene Model

Click here to download ENSFALG00000002594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000002594	-	80	40.526	ENSFALG00000007765	RAB30	94	40.526
ENSFALG00000002594	-	79	46.237	ENSFALG00000003709	RAB19	86	46.237
ENSFALG00000002594	-	73	52.047	ENSFALG00000005613	RAB2A	99	46.047
ENSFALG00000002594	-	58	39.416	ENSFALG00000004409	RAB20	57	39.416
ENSFALG00000002594	-	89	78.947	ENSFALG00000010052	RAB11A	100	78.947
ENSFALG00000002594	-	78	33.862	ENSFALG00000007362	RAB36	71	33.862
ENSFALG00000002594	-	86	63.902	ENSFALG00000002597	RAB25	79	63.902
ENSFALG00000002594	-	77	42.935	ENSFALG00000001205	RAB15	87	42.935
ENSFALG00000002594	-	63	34.868	ENSFALG00000003867	KRAS	97	32.620
ENSFALG00000002594	-	73	37.500	ENSFALG00000011581	RAB33A	86	36.702
ENSFALG00000002594	-	84	37.089	ENSFALG00000004886	RAB33B	91	37.089
ENSFALG00000002594	-	66	32.692	ENSFALG00000001708	RAB23	73	32.571
ENSFALG00000002594	-	66	43.871	ENSFALG00000007652	RAB35	94	36.364
ENSFALG00000002594	-	67	35.032	ENSFALG00000008011	RAB6A	75	35.032
ENSFALG00000002594	-	66	30.573	ENSFALG00000013196	MRAS	81	32.353
ENSFALG00000002594	-	87	43.627	ENSFALG00000009239	RAB5A	91	43.627
ENSFALG00000002594	-	69	32.558	ENSFALG00000008621	RASL11A	72	32.558
ENSFALG00000002594	-	63	34.868	ENSFALG00000012145	HRAS	85	35.976
ENSFALG00000002594	-	65	37.255	ENSFALG00000003276	-	80	37.647
ENSFALG00000002594	-	87	41.748	ENSFALG00000000201	RAB39B	96	41.748
ENSFALG00000002594	-	51	30.894	ENSFALG00000014498	ARL4A	60	30.894
ENSFALG00000002594	-	66	41.875	ENSFALG00000015159	RAB9A	79	41.875
ENSFALG00000002594	-	69	41.916	ENSFALG00000015153	RAB9B	83	41.916
ENSFALG00000002594	-	92	79.358	ENSFALG00000011828	-	100	79.358
ENSFALG00000002594	-	80	43.085	ENSFALG00000012783	RAB17	86	43.085
ENSFALG00000002594	-	68	31.056	ENSFALG00000000852	-	77	31.056
ENSFALG00000002594	-	89	37.089	ENSFALG00000001373	-	99	37.089
ENSFALG00000002594	-	75	36.612	ENSFALG00000007930	RAB7A	88	36.612
ENSFALG00000002594	-	87	44.390	ENSFALG00000013624	RAB1A	96	44.390
ENSFALG00000002594	-	73	43.605	ENSFALG00000007160	RAB18	81	44.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002594	-	91	80.930	ENSAPOG00000008251	rab11al	99	80.930	Acanthochromis_polyacanthus
ENSFALG00000002594	-	91	79.907	ENSACIG00000017403	rab11al	99	79.907	Amphilophus_citrinellus
ENSFALG00000002594	-	91	80.374	ENSAOCG00000015678	rab11al	99	80.374	Amphiprion_ocellaris
ENSFALG00000002594	-	91	80.374	ENSAPEG00000022135	rab11al	99	80.374	Amphiprion_percula
ENSFALG00000002594	-	91	79.907	ENSATEG00000006156	rab11al	99	79.907	Anabas_testudineus
ENSFALG00000002594	-	91	80.374	ENSACLG00000010268	rab11al	99	80.374	Astatotilapia_calliptera
ENSFALG00000002594	-	86	77.228	ENSAMXG00000024632	rab11al	92	77.228	Astyanax_mexicanus
ENSFALG00000002594	-	86	89.655	ENSCPBG00000025819	-	99	89.655	Chrysemys_picta_bellii
ENSFALG00000002594	-	91	80.374	ENSCSEG00000011996	rab11al	99	80.374	Cynoglossus_semilaevis
ENSFALG00000002594	-	91	81.395	ENSCVAG00000020016	rab11al	99	81.395	Cyprinodon_variegatus
ENSFALG00000002594	-	91	81.860	ENSDARG00000014340	rab11al	99	81.860	Danio_rerio
ENSFALG00000002594	-	91	80.930	ENSELUG00000012035	rab11al	99	80.930	Esox_lucius
ENSFALG00000002594	-	87	83.333	ENSFHEG00000000832	rab11al	98	83.333	Fundulus_heteroclitus
ENSFALG00000002594	-	86	80.100	ENSGMOG00000006450	rab11al	99	80.100	Gadus_morhua
ENSFALG00000002594	-	95	87.946	ENSGALG00000037802	-	52	87.946	Gallus_gallus
ENSFALG00000002594	-	91	81.860	ENSGAFG00000021725	rab11al	99	81.860	Gambusia_affinis
ENSFALG00000002594	-	91	80.374	ENSGACG00000013259	rab11al	99	80.374	Gasterosteus_aculeatus
ENSFALG00000002594	-	92	91.204	ENSGAGG00000020702	-	100	91.204	Gopherus_agassizii
ENSFALG00000002594	-	91	80.374	ENSHBUG00000009333	rab11al	99	80.374	Haplochromis_burtoni
ENSFALG00000002594	-	91	80.465	ENSHCOG00000000232	rab11al	99	80.465	Hippocampus_comes
ENSFALG00000002594	-	91	80.930	ENSIPUG00000006091	RAB11A	99	80.930	Ictalurus_punctatus
ENSFALG00000002594	-	91	78.972	ENSKMAG00000015516	rab11al	99	78.972	Kryptolebias_marmoratus
ENSFALG00000002594	-	91	80.930	ENSLBEG00000016417	rab11al	99	80.930	Labrus_bergylta
ENSFALG00000002594	-	92	81.481	ENSLACG00000011380	rab11al	99	81.481	Latimeria_chalumnae
ENSFALG00000002594	-	91	82.710	ENSLOCG00000008865	rab11al	99	82.710	Lepisosteus_oculatus
ENSFALG00000002594	-	91	80.465	ENSMAMG00000010278	rab11al	99	80.465	Mastacembelus_armatus
ENSFALG00000002594	-	91	80.374	ENSMZEG00005017514	rab11al	99	80.374	Maylandia_zebra
ENSFALG00000002594	-	68	95.000	ENSMGAG00000004720	-	95	95.000	Meleagris_gallopavo
ENSFALG00000002594	-	72	90.000	ENSMMOG00000017117	rab11al	83	90.000	Mola_mola
ENSFALG00000002594	-	91	79.070	ENSMALG00000004093	rab11al	99	79.070	Monopterus_albus
ENSFALG00000002594	-	91	80.374	ENSNBRG00000005116	rab11al	99	80.374	Neolamprologus_brichardi
ENSFALG00000002594	-	91	79.907	ENSONIG00000002281	rab11al	99	79.907	Oreochromis_niloticus
ENSFALG00000002594	-	91	80.930	ENSORLG00000016126	rab11al	99	80.930	Oryzias_latipes
ENSFALG00000002594	-	91	80.930	ENSORLG00020013747	rab11al	99	80.930	Oryzias_latipes_hni
ENSFALG00000002594	-	91	80.930	ENSORLG00015019591	rab11al	99	80.930	Oryzias_latipes_hsok
ENSFALG00000002594	-	91	80.374	ENSOMEG00000020271	rab11al	99	80.374	Oryzias_melastigma
ENSFALG00000002594	-	91	79.439	ENSPKIG00000020893	rab11al	99	79.439	Paramormyrops_kingsleyae
ENSFALG00000002594	-	92	89.352	ENSPSIG00000013143	-	100	89.352	Pelodiscus_sinensis
ENSFALG00000002594	-	91	79.907	ENSPMGG00000004220	rab11al	89	91.791	Periophthalmus_magnuspinnatus
ENSFALG00000002594	-	91	80.930	ENSPFOG00000011316	rab11al	99	80.930	Poecilia_formosa
ENSFALG00000002594	-	91	80.930	ENSPLAG00000007986	rab11al	99	80.930	Poecilia_latipinna
ENSFALG00000002594	-	91	80.930	ENSPMEG00000000804	rab11al	99	80.930	Poecilia_mexicana
ENSFALG00000002594	-	91	80.930	ENSPREG00000017324	rab11al	99	80.930	Poecilia_reticulata
ENSFALG00000002594	-	91	80.374	ENSPNYG00000018244	rab11al	99	80.374	Pundamilia_nyererei
ENSFALG00000002594	-	91	81.860	ENSPNAG00000029085	rab11al	99	81.860	Pygocentrus_nattereri
ENSFALG00000002594	-	91	80.374	ENSSFOG00015008618	rab11al	99	80.374	Scleropages_formosus
ENSFALG00000002594	-	91	79.907	ENSSMAG00000016206	rab11al	99	79.907	Scophthalmus_maximus
ENSFALG00000002594	-	91	80.374	ENSSDUG00000006278	rab11al	99	80.374	Seriola_dumerili
ENSFALG00000002594	-	91	80.374	ENSSLDG00000012116	rab11al	99	80.374	Seriola_lalandi_dorsalis
ENSFALG00000002594	-	92	88.479	ENSSPUG00000002526	-	100	88.479	Sphenodon_punctatus
ENSFALG00000002594	-	91	79.535	ENSSPAG00000012044	rab11al	99	79.535	Stegastes_partitus
ENSFALG00000002594	-	86	93.596	ENSTGUG00000003680	-	100	93.596	Taeniopygia_guttata
ENSFALG00000002594	-	90	80.660	ENSTRUG00000007556	rab11al	94	90.345	Takifugu_rubripes
ENSFALG00000002594	-	91	81.395	ENSXCOG00000004226	rab11al	99	81.395	Xiphophorus_couchianus
ENSFALG00000002594	-	91	81.395	ENSXMAG00000027071	rab11al	99	81.395	Xiphophorus_maculatus