EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000002623 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 31257 bases
Position: chrJH603320.1:1689097-1720353
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002733	DEAD	PF00270.29	1.9e-10	1	1
ENSFALP00000002733	YTH	PF04146.15	6.1e-44	1	1
ENSFALP00000002733	HA2	PF04408.23	5.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002745	-	5105	-	ENSFALP00000002733	1309 (aa)	-	U3JIX9

Gene Model

Click here to download ENSFALG00000002623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000002623	-	57	48.341	ENSFALG00000005045	DHX36	80	48.341
ENSFALG00000002623	-	99	85.233	ENSFALG00000000040	-	95	85.386
ENSFALG00000002623	-	54	47.368	ENSFALG00000002367	DHX57	54	47.368
ENSFALG00000002623	-	57	45.588	ENSFALG00000002992	DHX9	59	44.344
ENSFALG00000002623	-	55	40.541	ENSFALG00000002009	DHX30	60	40.541
ENSFALG00000002623	-	50	45.503	ENSFALG00000009210	DHX15	91	45.503
ENSFALG00000002623	-	56	44.651	ENSFALG00000010826	DHX29	57	44.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002623	-	99	83.257	ENSG00000047188	YTHDC2	91	83.257	Homo_sapiens
ENSFALG00000002623	-	78	61.914	ENSAPOG00000013442	YTHDC2	96	61.095	Acanthochromis_polyacanthus
ENSFALG00000002623	-	99	83.563	ENSAMEG00000006598	YTHDC2	91	83.563	Ailuropoda_melanoleuca
ENSFALG00000002623	-	99	62.357	ENSACIG00000012809	YTHDC2	93	61.832	Amphilophus_citrinellus
ENSFALG00000002623	-	97	62.980	ENSAOCG00000018480	YTHDC2	99	64.052	Amphiprion_ocellaris
ENSFALG00000002623	-	98	64.273	ENSAPEG00000014873	YTHDC2	91	63.720	Amphiprion_percula
ENSFALG00000002623	-	99	61.362	ENSATEG00000010847	YTHDC2	92	60.979	Anabas_testudineus
ENSFALG00000002623	-	51	83.409	ENSAPLG00000013814	YTHDC2	99	83.409	Anas_platyrhynchos
ENSFALG00000002623	-	99	81.887	ENSACAG00000007754	YTHDC2	91	82.040	Anolis_carolinensis
ENSFALG00000002623	-	99	81.116	ENSANAG00000022177	YTHDC2	91	81.116	Aotus_nancymaae
ENSFALG00000002623	-	99	61.679	ENSACLG00000019069	YTHDC2	91	61.550	Astatotilapia_calliptera
ENSFALG00000002623	-	99	70.122	ENSAMXG00000008735	YTHDC2	92	69.817	Astyanax_mexicanus
ENSFALG00000002623	-	99	83.639	ENSBTAG00000014099	YTHDC2	96	83.639	Bos_taurus
ENSFALG00000002623	-	99	83.104	ENSCJAG00000016598	YTHDC2	94	83.104	Callithrix_jacchus
ENSFALG00000002623	-	99	78.839	ENSCAFG00000000224	YTHDC2	88	86.538	Canis_familiaris
ENSFALG00000002623	-	99	83.792	ENSCAFG00020003668	YTHDC2	92	83.792	Canis_lupus_dingo
ENSFALG00000002623	-	99	83.716	ENSCHIG00000026651	YTHDC2	99	79.223	Capra_hircus
ENSFALG00000002623	-	99	84.086	ENSTSYG00000009634	YTHDC2	94	84.086	Carlito_syrichta
ENSFALG00000002623	-	85	65.061	ENSCAPG00000015691	YTHDC2	93	65.325	Cavia_aperea
ENSFALG00000002623	-	99	83.716	ENSCPOG00000000272	YTHDC2	91	83.716	Cavia_porcellus
ENSFALG00000002623	-	99	83.792	ENSCCAG00000037613	YTHDC2	91	83.792	Cebus_capucinus
ENSFALG00000002623	-	99	83.486	ENSCATG00000031670	YTHDC2	91	83.486	Cercocebus_atys
ENSFALG00000002623	-	99	82.890	ENSCLAG00000014076	YTHDC2	91	82.890	Chinchilla_lanigera
ENSFALG00000002623	-	99	83.410	ENSCSAG00000014899	YTHDC2	91	83.410	Chlorocebus_sabaeus
ENSFALG00000002623	-	91	79.787	ENSCHOG00000013323	YTHDC2	87	79.787	Choloepus_hoffmanni
ENSFALG00000002623	-	99	84.786	ENSCPBG00000013876	YTHDC2	92	84.786	Chrysemys_picta_bellii
ENSFALG00000002623	-	99	83.716	ENSCANG00000025759	YTHDC2	91	83.716	Colobus_angolensis_palliatus
ENSFALG00000002623	-	99	83.869	ENSCGRG00001021338	Ythdc2	91	83.869	Cricetulus_griseus_chok1gshd
ENSFALG00000002623	-	99	83.028	ENSCGRG00000010336	Ythdc2	91	83.028	Cricetulus_griseus_crigri
ENSFALG00000002623	-	84	50.775	ENSCSEG00000017911	YTHDC2	90	51.150	Cynoglossus_semilaevis
ENSFALG00000002623	-	99	59.237	ENSCVAG00000021377	YTHDC2	92	58.900	Cyprinodon_variegatus
ENSFALG00000002623	-	99	60.395	ENSDARG00000103525	YTHDC2	92	59.613	Danio_rerio
ENSFALG00000002623	-	99	81.145	ENSDNOG00000012198	YTHDC2	91	81.221	Dasypus_novemcinctus
ENSFALG00000002623	-	99	80.505	ENSDORG00000007057	Ythdc2	92	80.505	Dipodomys_ordii
ENSFALG00000002623	-	57	43.062	FBgn0030833	CG8915	71	43.062	Drosophila_melanogaster
ENSFALG00000002623	-	82	87.075	ENSETEG00000013681	YTHDC2	75	87.075	Echinops_telfairi
ENSFALG00000002623	-	95	55.403	ENSEBUG00000014315	-	88	55.403	Eptatretus_burgeri
ENSFALG00000002623	-	99	82.645	ENSEASG00005015135	YTHDC2	91	83.410	Equus_asinus_asinus
ENSFALG00000002623	-	99	82.569	ENSECAG00000020630	YTHDC2	91	85.000	Equus_caballus
ENSFALG00000002623	-	86	84.080	ENSEEUG00000008580	YTHDC2	79	84.080	Erinaceus_europaeus
ENSFALG00000002623	-	99	69.749	ENSELUG00000015902	YTHDC2	92	69.481	Esox_lucius
ENSFALG00000002623	-	99	83.575	ENSFCAG00000031967	YTHDC2	92	83.575	Felis_catus
ENSFALG00000002623	-	99	83.486	ENSFDAG00000008701	YTHDC2	94	83.486	Fukomys_damarensis
ENSFALG00000002623	-	99	60.550	ENSFHEG00000009312	YTHDC2	91	60.351	Fundulus_heteroclitus
ENSFALG00000002623	-	99	83.015	ENSGALG00000000189	YTHDC2	95	82.619	Gallus_gallus
ENSFALG00000002623	-	82	66.667	ENSGAFG00000008158	YTHDC2	85	66.667	Gambusia_affinis
ENSFALG00000002623	-	60	72.429	ENSGACG00000018569	YTHDC2	99	72.429	Gasterosteus_aculeatus
ENSFALG00000002623	-	99	84.786	ENSGAGG00000010063	YTHDC2	96	84.786	Gopherus_agassizii
ENSFALG00000002623	-	99	83.563	ENSGGOG00000014407	YTHDC2	91	83.563	Gorilla_gorilla
ENSFALG00000002623	-	83	63.804	ENSHBUG00000007492	YTHDC2	86	63.401	Haplochromis_burtoni
ENSFALG00000002623	-	99	83.257	ENSHGLG00000019014	YTHDC2	91	83.257	Heterocephalus_glaber_female
ENSFALG00000002623	-	99	83.257	ENSHGLG00100008192	YTHDC2	91	83.257	Heterocephalus_glaber_male
ENSFALG00000002623	-	90	66.187	ENSHCOG00000014281	YTHDC2	88	66.187	Hippocampus_comes
ENSFALG00000002623	-	99	67.652	ENSIPUG00000019561	ythdc2	90	67.629	Ictalurus_punctatus
ENSFALG00000002623	-	99	83.792	ENSSTOG00000013239	YTHDC2	91	83.792	Ictidomys_tridecemlineatus
ENSFALG00000002623	-	99	80.395	ENSJJAG00000017908	Ythdc2	91	80.395	Jaculus_jaculus
ENSFALG00000002623	-	99	60.957	ENSKMAG00000015969	YTHDC2	91	61.206	Kryptolebias_marmoratus
ENSFALG00000002623	-	99	62.072	ENSLBEG00000027926	YTHDC2	92	60.275	Labrus_bergylta
ENSFALG00000002623	-	99	78.610	ENSLACG00000010991	YTHDC2	92	78.610	Latimeria_chalumnae
ENSFALG00000002623	-	99	70.852	ENSLOCG00000009001	YTHDC2	92	70.852	Lepisosteus_oculatus
ENSFALG00000002623	-	96	84.439	ENSLAFG00000003538	YTHDC2	99	84.439	Loxodonta_africana
ENSFALG00000002623	-	50	81.442	ENSMFAG00000033417	-	99	81.442	Macaca_fascicularis
ENSFALG00000002623	-	51	81.409	ENSMMUG00000001376	-	99	81.409	Macaca_mulatta
ENSFALG00000002623	-	99	83.486	ENSMNEG00000040900	YTHDC2	91	83.486	Macaca_nemestrina
ENSFALG00000002623	-	99	83.639	ENSMLEG00000043185	YTHDC2	91	83.639	Mandrillus_leucophaeus
ENSFALG00000002623	-	99	63.366	ENSMAMG00000019193	YTHDC2	92	63.290	Mastacembelus_armatus
ENSFALG00000002623	-	99	61.901	ENSMZEG00005009153	YTHDC2	92	61.568	Maylandia_zebra
ENSFALG00000002623	-	99	71.625	ENSMGAG00000006674	YTHDC2	91	78.131	Meleagris_gallopavo
ENSFALG00000002623	-	99	83.869	ENSMAUG00000016179	Ythdc2	91	83.869	Mesocricetus_auratus
ENSFALG00000002623	-	99	83.716	ENSMICG00000004030	YTHDC2	91	85.000	Microcebus_murinus
ENSFALG00000002623	-	99	83.639	ENSMOCG00000011740	Ythdc2	91	83.639	Microtus_ochrogaster
ENSFALG00000002623	-	83	60.440	ENSMMOG00000011758	YTHDC2	86	60.440	Mola_mola
ENSFALG00000002623	-	99	84.480	ENSMODG00000015671	YTHDC2	90	84.480	Monodelphis_domestica
ENSFALG00000002623	-	82	63.747	ENSMALG00000002782	YTHDC2	86	63.340	Monopterus_albus
ENSFALG00000002623	-	99	83.869	MGP_CAROLIEiJ_G0022248	Ythdc2	99	85.269	Mus_caroli
ENSFALG00000002623	-	99	83.869	ENSMUSG00000034653	Ythdc2	99	85.269	Mus_musculus
ENSFALG00000002623	-	99	83.869	MGP_PahariEiJ_G0018981	Ythdc2	99	85.269	Mus_pahari
ENSFALG00000002623	-	99	83.869	MGP_SPRETEiJ_G0023159	Ythdc2	99	85.269	Mus_spretus
ENSFALG00000002623	-	99	83.869	ENSMPUG00000000755	YTHDC2	94	83.869	Mustela_putorius_furo
ENSFALG00000002623	-	99	82.964	ENSMLUG00000006106	YTHDC2	91	82.735	Myotis_lucifugus
ENSFALG00000002623	-	99	84.009	ENSNGAG00000017798	Ythdc2	92	84.009	Nannospalax_galili
ENSFALG00000002623	-	98	58.602	ENSNBRG00000000762	YTHDC2	89	58.372	Neolamprologus_brichardi
ENSFALG00000002623	-	99	83.180	ENSNLEG00000011648	YTHDC2	91	83.180	Nomascus_leucogenys
ENSFALG00000002623	-	81	81.238	ENSMEUG00000004414	YTHDC2	74	81.238	Notamacropus_eugenii
ENSFALG00000002623	-	75	94.118	ENSOPRG00000000462	YTHDC2	70	94.118	Ochotona_princeps
ENSFALG00000002623	-	99	83.563	ENSODEG00000007804	YTHDC2	91	83.563	Octodon_degus
ENSFALG00000002623	-	99	63.070	ENSONIG00000011601	YTHDC2	93	62.395	Oreochromis_niloticus
ENSFALG00000002623	-	99	84.021	ENSOCUG00000012096	YTHDC2	96	84.021	Oryctolagus_cuniculus
ENSFALG00000002623	-	80	72.727	ENSORLG00000019098	YTHDC2	90	69.951	Oryzias_latipes
ENSFALG00000002623	-	99	54.947	ENSORLG00015000390	YTHDC2	92	54.871	Oryzias_latipes_hsok
ENSFALG00000002623	-	99	56.174	ENSOMEG00000014221	YTHDC2	92	55.887	Oryzias_melastigma
ENSFALG00000002623	-	99	83.945	ENSOGAG00000001618	YTHDC2	91	83.945	Otolemur_garnettii
ENSFALG00000002623	-	99	83.588	ENSOARG00000016223	YTHDC2	91	83.588	Ovis_aries
ENSFALG00000002623	-	99	83.486	ENSPPAG00000018854	YTHDC2	91	83.486	Pan_paniscus
ENSFALG00000002623	-	99	83.575	ENSPPRG00000001595	YTHDC2	92	83.575	Panthera_pardus
ENSFALG00000002623	-	99	83.652	ENSPTIG00000021801	YTHDC2	92	83.652	Panthera_tigris_altaica
ENSFALG00000002623	-	99	83.486	ENSPTRG00000017143	YTHDC2	91	83.486	Pan_troglodytes
ENSFALG00000002623	-	99	80.337	ENSPANG00000024470	YTHDC2	91	80.337	Papio_anubis
ENSFALG00000002623	-	99	67.661	ENSPKIG00000016010	YTHDC2	93	67.607	Paramormyrops_kingsleyae
ENSFALG00000002623	-	99	84.786	ENSPSIG00000014798	YTHDC2	96	84.786	Pelodiscus_sinensis
ENSFALG00000002623	-	50	61.280	ENSPMGG00000020671	YTHDC2	98	60.976	Periophthalmus_magnuspinnatus
ENSFALG00000002623	-	99	83.716	ENSPEMG00000018062	Ythdc2	91	83.716	Peromyscus_maniculatus_bairdii
ENSFALG00000002623	-	99	60.731	ENSPMAG00000003218	-	92	60.576	Petromyzon_marinus
ENSFALG00000002623	-	99	84.174	ENSPCIG00000004342	YTHDC2	92	84.174	Phascolarctos_cinereus
ENSFALG00000002623	-	99	60.893	ENSPFOG00000003895	YTHDC2	99	61.915	Poecilia_formosa
ENSFALG00000002623	-	99	60.671	ENSPLAG00000007558	YTHDC2	92	60.412	Poecilia_latipinna
ENSFALG00000002623	-	99	60.929	ENSPMEG00000015205	YTHDC2	95	60.671	Poecilia_mexicana
ENSFALG00000002623	-	99	60.320	ENSPREG00000012096	YTHDC2	91	59.262	Poecilia_reticulata
ENSFALG00000002623	-	99	82.492	ENSPPYG00000015691	YTHDC2	91	82.492	Pongo_abelii
ENSFALG00000002623	-	90	76.176	ENSPCAG00000007733	YTHDC2	82	76.176	Procavia_capensis
ENSFALG00000002623	-	99	75.038	ENSPCOG00000017526	YTHDC2	91	75.038	Propithecus_coquereli
ENSFALG00000002623	-	92	85.359	ENSPVAG00000012364	YTHDC2	85	85.359	Pteropus_vampyrus
ENSFALG00000002623	-	98	61.920	ENSPNYG00000006908	YTHDC2	89	61.580	Pundamilia_nyererei
ENSFALG00000002623	-	100	70.481	ENSPNAG00000010128	YTHDC2	92	70.252	Pygocentrus_nattereri
ENSFALG00000002623	-	87	81.762	ENSRNOG00000039241	Ythdc2	91	81.654	Rattus_norvegicus
ENSFALG00000002623	-	99	80.303	ENSRBIG00000040291	YTHDC2	91	80.303	Rhinopithecus_bieti
ENSFALG00000002623	-	99	83.333	ENSRROG00000039477	YTHDC2	91	83.333	Rhinopithecus_roxellana
ENSFALG00000002623	-	99	83.869	ENSSBOG00000023829	YTHDC2	91	83.869	Saimiri_boliviensis_boliviensis
ENSFALG00000002623	-	99	84.404	ENSSHAG00000003101	YTHDC2	92	84.404	Sarcophilus_harrisii
ENSFALG00000002623	-	100	65.145	ENSSFOG00015003572	ythdc2	93	64.992	Scleropages_formosus
ENSFALG00000002623	-	81	55.388	ENSSMAG00000011225	YTHDC2	85	55.388	Scophthalmus_maximus
ENSFALG00000002623	-	99	61.767	ENSSDUG00000021389	YTHDC2	92	61.441	Seriola_dumerili
ENSFALG00000002623	-	99	63.616	ENSSLDG00000022840	YTHDC2	92	63.282	Seriola_lalandi_dorsalis
ENSFALG00000002623	-	89	87.755	ENSSARG00000000924	YTHDC2	87	87.755	Sorex_araneus
ENSFALG00000002623	-	50	79.601	ENSSPUG00000015945	-	98	79.846	Sphenodon_punctatus
ENSFALG00000002623	-	99	61.421	ENSSPAG00000014889	YTHDC2	92	61.056	Stegastes_partitus
ENSFALG00000002623	-	99	83.945	ENSSSCG00000014211	YTHDC2	99	83.881	Sus_scrofa
ENSFALG00000002623	-	76	82.430	ENSTGUG00000014992	-	100	82.430	Taeniopygia_guttata
ENSFALG00000002623	-	99	93.267	ENSTGUG00000003755	-	98	93.267	Taeniopygia_guttata
ENSFALG00000002623	-	99	56.827	ENSTRUG00000006717	YTHDC2	92	56.455	Takifugu_rubripes
ENSFALG00000002623	-	99	58.972	ENSTNIG00000003707	YTHDC2	97	58.896	Tetraodon_nigroviridis
ENSFALG00000002623	-	86	80.183	ENSTBEG00000006872	YTHDC2	83	80.183	Tupaia_belangeri
ENSFALG00000002623	-	84	86.986	ENSTTRG00000003116	YTHDC2	76	86.986	Tursiops_truncatus
ENSFALG00000002623	-	74	86.008	ENSUAMG00000003688	YTHDC2	89	86.097	Ursus_americanus
ENSFALG00000002623	-	99	83.639	ENSUMAG00000023877	YTHDC2	95	83.639	Ursus_maritimus
ENSFALG00000002623	-	99	76.835	ENSVPAG00000007516	YTHDC2	91	76.835	Vicugna_pacos
ENSFALG00000002623	-	99	83.869	ENSVVUG00000000281	YTHDC2	92	83.869	Vulpes_vulpes
ENSFALG00000002623	-	99	73.936	ENSXETG00000021517	ythdc2	92	73.936	Xenopus_tropicalis
ENSFALG00000002623	-	93	65.789	ENSXCOG00000016406	YTHDC2	89	65.789	Xiphophorus_couchianus
ENSFALG00000002623	-	99	60.823	ENSXMAG00000007618	YTHDC2	92	60.671	Xiphophorus_maculatus