EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000002646 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 5738 bases
Position: chrJH603267.1:421682-427419
Accession: 101811434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002754	LSM	PF01423.22	7.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002766	SNRPD1-201	1072	-	ENSFALP00000002754	112 (aa)	XP_005041315	U3JJ00

Gene Model

Click here to download ENSFALG00000002646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000002646	SNRPD1	79	32.584	ENSFALG00000000851	LSM10	54	34.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002646	SNRPD1	100	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSFALG00000002646	SNRPD1	100	96.429	ENSAPOG00000019446	snrpd1	61	96.429	Acanthochromis_polyacanthus
ENSFALG00000002646	SNRPD1	100	100.000	ENSAMEG00000002576	SNRPD1	96	100.000	Ailuropoda_melanoleuca
ENSFALG00000002646	SNRPD1	100	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSFALG00000002646	SNRPD1	100	96.429	ENSAOCG00000007406	snrpd1	94	96.429	Amphiprion_ocellaris
ENSFALG00000002646	SNRPD1	100	91.964	ENSAPEG00000014961	snrpd1	94	91.964	Amphiprion_percula
ENSFALG00000002646	SNRPD1	100	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSFALG00000002646	SNRPD1	100	96.429	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSFALG00000002646	SNRPD1	100	100.000	ENSAPLG00000012256	SNRPD1	94	100.000	Anas_platyrhynchos
ENSFALG00000002646	SNRPD1	100	100.000	ENSACAG00000006364	SNRPD1	94	100.000	Anolis_carolinensis
ENSFALG00000002646	SNRPD1	100	100.000	ENSANAG00000025641	SNRPD1	94	100.000	Aotus_nancymaae
ENSFALG00000002646	SNRPD1	100	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSFALG00000002646	SNRPD1	100	97.321	ENSAMXG00000004589	snrpd1	94	97.321	Astyanax_mexicanus
ENSFALG00000002646	SNRPD1	100	97.321	ENSBTAG00000047266	-	94	97.321	Bos_taurus
ENSFALG00000002646	SNRPD1	100	100.000	ENSBTAG00000008292	SNRPD1	94	100.000	Bos_taurus
ENSFALG00000002646	SNRPD1	100	90.179	ENSBTAG00000055316	-	90	90.179	Bos_taurus
ENSFALG00000002646	SNRPD1	96	97.196	ENSBTAG00000012376	-	80	97.196	Bos_taurus
ENSFALG00000002646	SNRPD1	72	79.012	WBGene00004916	snr-3	71	74.157	Caenorhabditis_elegans
ENSFALG00000002646	SNRPD1	100	100.000	ENSCJAG00000042955	SNRPD1	94	100.000	Callithrix_jacchus
ENSFALG00000002646	SNRPD1	100	100.000	ENSCAFG00000018247	SNRPD1	94	100.000	Canis_familiaris
ENSFALG00000002646	SNRPD1	79	100.000	ENSCAFG00020015914	SNRPD1	69	100.000	Canis_lupus_dingo
ENSFALG00000002646	SNRPD1	100	100.000	ENSCHIG00000005557	SNRPD1	94	100.000	Capra_hircus
ENSFALG00000002646	SNRPD1	100	100.000	ENSTSYG00000030028	SNRPD1	94	100.000	Carlito_syrichta
ENSFALG00000002646	SNRPD1	100	100.000	ENSCAPG00000008103	SNRPD1	97	100.000	Cavia_aperea
ENSFALG00000002646	SNRPD1	100	100.000	ENSCPOG00000004679	SNRPD1	97	100.000	Cavia_porcellus
ENSFALG00000002646	SNRPD1	100	99.107	ENSCCAG00000020611	-	94	99.107	Cebus_capucinus
ENSFALG00000002646	SNRPD1	100	100.000	ENSCCAG00000032658	SNRPD1	94	100.000	Cebus_capucinus
ENSFALG00000002646	SNRPD1	100	96.429	ENSCCAG00000005390	-	94	96.429	Cebus_capucinus
ENSFALG00000002646	SNRPD1	100	96.429	ENSCCAG00000016652	-	94	96.429	Cebus_capucinus
ENSFALG00000002646	SNRPD1	100	100.000	ENSCATG00000039978	SNRPD1	94	100.000	Cercocebus_atys
ENSFALG00000002646	SNRPD1	100	100.000	ENSCLAG00000008691	SNRPD1	94	100.000	Chinchilla_lanigera
ENSFALG00000002646	SNRPD1	100	100.000	ENSCSAG00000017654	SNRPD1	94	100.000	Chlorocebus_sabaeus
ENSFALG00000002646	SNRPD1	100	100.000	ENSCPBG00000023143	SNRPD1	94	100.000	Chrysemys_picta_bellii
ENSFALG00000002646	SNRPD1	71	87.342	ENSCING00000024100	-	63	87.342	Ciona_intestinalis
ENSFALG00000002646	SNRPD1	71	85.000	ENSCSAVG00000004578	-	64	85.000	Ciona_savignyi
ENSFALG00000002646	SNRPD1	79	75.000	ENSCGRG00001009945	-	77	75.000	Cricetulus_griseus_chok1gshd
ENSFALG00000002646	SNRPD1	100	100.000	ENSCGRG00001021055	-	94	100.000	Cricetulus_griseus_chok1gshd
ENSFALG00000002646	SNRPD1	79	75.000	ENSCGRG00000006224	-	77	75.000	Cricetulus_griseus_crigri
ENSFALG00000002646	SNRPD1	100	100.000	ENSCGRG00000000490	-	94	100.000	Cricetulus_griseus_crigri
ENSFALG00000002646	SNRPD1	79	94.318	ENSCSEG00000018141	snrpd1	75	94.382	Cynoglossus_semilaevis
ENSFALG00000002646	SNRPD1	100	96.429	ENSCVAG00000000534	snrpd1	94	96.429	Cyprinodon_variegatus
ENSFALG00000002646	SNRPD1	100	97.321	ENSDARG00000011648	snrpd1	94	97.321	Danio_rerio
ENSFALG00000002646	SNRPD1	100	100.000	ENSDNOG00000040310	SNRPD1	94	100.000	Dasypus_novemcinctus
ENSFALG00000002646	SNRPD1	100	100.000	ENSDORG00000008349	Snrpd1	94	100.000	Dipodomys_ordii
ENSFALG00000002646	SNRPD1	78	81.609	FBgn0261933	SmD1	70	81.609	Drosophila_melanogaster
ENSFALG00000002646	SNRPD1	79	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSFALG00000002646	SNRPD1	94	92.381	ENSEBUG00000003170	snrpd1	88	92.381	Eptatretus_burgeri
ENSFALG00000002646	SNRPD1	100	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSFALG00000002646	SNRPD1	100	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSFALG00000002646	SNRPD1	78	100.000	ENSEEUG00000004987	SNRPD1	98	100.000	Erinaceus_europaeus
ENSFALG00000002646	SNRPD1	93	84.615	ENSELUG00000000088	snrpd1	73	95.402	Esox_lucius
ENSFALG00000002646	SNRPD1	100	100.000	ENSFCAG00000012352	SNRPD1	94	100.000	Felis_catus
ENSFALG00000002646	SNRPD1	100	97.321	ENSGMOG00000015607	snrpd1	94	97.321	Gadus_morhua
ENSFALG00000002646	SNRPD1	100	100.000	ENSGALG00000041334	SNRPD1	94	100.000	Gallus_gallus
ENSFALG00000002646	SNRPD1	100	96.429	ENSGAFG00000011171	snrpd1	94	96.429	Gambusia_affinis
ENSFALG00000002646	SNRPD1	100	97.321	ENSGACG00000005201	SNRPD1	94	97.321	Gasterosteus_aculeatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSGAGG00000011197	SNRPD1	94	100.000	Gopherus_agassizii
ENSFALG00000002646	SNRPD1	100	100.000	ENSGGOG00000041053	SNRPD1	94	100.000	Gorilla_gorilla
ENSFALG00000002646	SNRPD1	79	94.382	ENSGGOG00000026706	-	74	94.382	Gorilla_gorilla
ENSFALG00000002646	SNRPD1	100	96.429	ENSHBUG00000003236	snrpd1	94	96.429	Haplochromis_burtoni
ENSFALG00000002646	SNRPD1	100	100.000	ENSHGLG00000007152	SNRPD1	94	100.000	Heterocephalus_glaber_female
ENSFALG00000002646	SNRPD1	100	100.000	ENSHGLG00100008618	SNRPD1	94	100.000	Heterocephalus_glaber_male
ENSFALG00000002646	SNRPD1	100	96.429	ENSIPUG00000003576	snrpd1	94	96.429	Ictalurus_punctatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSSTOG00000000485	SNRPD1	95	100.000	Ictidomys_tridecemlineatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSJJAG00000017698	Snrpd1	94	100.000	Jaculus_jaculus
ENSFALG00000002646	SNRPD1	100	96.429	ENSKMAG00000005987	snrpd1	94	96.429	Kryptolebias_marmoratus
ENSFALG00000002646	SNRPD1	100	96.429	ENSLBEG00000003327	snrpd1	94	96.429	Labrus_bergylta
ENSFALG00000002646	SNRPD1	100	100.000	ENSLACG00000001955	SNRPD1	94	100.000	Latimeria_chalumnae
ENSFALG00000002646	SNRPD1	100	98.214	ENSLOCG00000002003	snrpd1	96	98.214	Lepisosteus_oculatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSLAFG00000005819	SNRPD1	95	100.000	Loxodonta_africana
ENSFALG00000002646	SNRPD1	100	100.000	ENSMFAG00000042080	SNRPD1	94	100.000	Macaca_fascicularis
ENSFALG00000002646	SNRPD1	100	100.000	ENSMMUG00000003992	SNRPD1	96	100.000	Macaca_mulatta
ENSFALG00000002646	SNRPD1	100	100.000	ENSMNEG00000041296	SNRPD1	94	100.000	Macaca_nemestrina
ENSFALG00000002646	SNRPD1	100	100.000	ENSMLEG00000028659	SNRPD1	94	100.000	Mandrillus_leucophaeus
ENSFALG00000002646	SNRPD1	100	96.429	ENSMAMG00000012971	snrpd1	94	96.429	Mastacembelus_armatus
ENSFALG00000002646	SNRPD1	100	96.429	ENSMZEG00005004685	snrpd1	94	96.429	Maylandia_zebra
ENSFALG00000002646	SNRPD1	100	100.000	ENSMGAG00000011598	SNRPD1	93	100.000	Meleagris_gallopavo
ENSFALG00000002646	SNRPD1	78	86.207	ENSMAUG00000016467	-	78	86.207	Mesocricetus_auratus
ENSFALG00000002646	SNRPD1	84	94.681	ENSMAUG00000006829	-	60	94.681	Mesocricetus_auratus
ENSFALG00000002646	SNRPD1	78	86.207	ENSMAUG00000016502	-	78	86.207	Mesocricetus_auratus
ENSFALG00000002646	SNRPD1	100	100.000	ENSMICG00000044066	SNRPD1	94	100.000	Microcebus_murinus
ENSFALG00000002646	SNRPD1	100	100.000	ENSMOCG00000017367	Snrpd1	94	100.000	Microtus_ochrogaster
ENSFALG00000002646	SNRPD1	100	96.429	ENSMMOG00000019089	snrpd1	94	96.429	Mola_mola
ENSFALG00000002646	SNRPD1	100	100.000	ENSMODG00000021487	SNRPD1	97	100.000	Monodelphis_domestica
ENSFALG00000002646	SNRPD1	100	96.429	ENSMALG00000014459	snrpd1	94	96.429	Monopterus_albus
ENSFALG00000002646	SNRPD1	100	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	94	100.000	Mus_caroli
ENSFALG00000002646	SNRPD1	100	100.000	ENSMUSG00000002477	Snrpd1	94	100.000	Mus_musculus
ENSFALG00000002646	SNRPD1	100	100.000	MGP_PahariEiJ_G0018731	Snrpd1	94	100.000	Mus_pahari
ENSFALG00000002646	SNRPD1	100	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	94	100.000	Mus_spretus
ENSFALG00000002646	SNRPD1	100	100.000	ENSMPUG00000005567	-	96	100.000	Mustela_putorius_furo
ENSFALG00000002646	SNRPD1	100	99.107	ENSMPUG00000020041	-	94	99.107	Mustela_putorius_furo
ENSFALG00000002646	SNRPD1	97	100.000	ENSMLUG00000009124	SNRPD1	84	100.000	Myotis_lucifugus
ENSFALG00000002646	SNRPD1	100	100.000	ENSNGAG00000023946	Snrpd1	94	100.000	Nannospalax_galili
ENSFALG00000002646	SNRPD1	78	95.402	ENSNBRG00000012119	snrpd1	72	95.402	Neolamprologus_brichardi
ENSFALG00000002646	SNRPD1	100	97.321	ENSNLEG00000031430	SNRPD1	94	97.321	Nomascus_leucogenys
ENSFALG00000002646	SNRPD1	100	100.000	ENSODEG00000005764	SNRPD1	94	100.000	Octodon_degus
ENSFALG00000002646	SNRPD1	100	96.429	ENSONIG00000002486	snrpd1	94	96.429	Oreochromis_niloticus
ENSFALG00000002646	SNRPD1	85	88.421	ENSOANG00000004638	-	80	88.421	Ornithorhynchus_anatinus
ENSFALG00000002646	SNRPD1	100	99.107	ENSOCUG00000014399	-	94	99.107	Oryctolagus_cuniculus
ENSFALG00000002646	SNRPD1	100	100.000	ENSOCUG00000023761	-	96	100.000	Oryctolagus_cuniculus
ENSFALG00000002646	SNRPD1	100	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSFALG00000002646	SNRPD1	100	96.429	ENSORLG00020005743	snrpd1	94	96.429	Oryzias_latipes_hni
ENSFALG00000002646	SNRPD1	100	96.429	ENSORLG00015013402	snrpd1	94	96.429	Oryzias_latipes_hsok
ENSFALG00000002646	SNRPD1	100	96.429	ENSOMEG00000011571	snrpd1	94	96.429	Oryzias_melastigma
ENSFALG00000002646	SNRPD1	100	100.000	ENSOGAG00000007833	SNRPD1	94	100.000	Otolemur_garnettii
ENSFALG00000002646	SNRPD1	100	94.643	ENSOARG00000003413	-	80	94.643	Ovis_aries
ENSFALG00000002646	SNRPD1	100	100.000	ENSPPAG00000042593	SNRPD1	94	100.000	Pan_paniscus
ENSFALG00000002646	SNRPD1	79	65.169	ENSPPRG00000005009	-	85	70.476	Panthera_pardus
ENSFALG00000002646	SNRPD1	100	100.000	ENSPPRG00000002399	SNRPD1	94	100.000	Panthera_pardus
ENSFALG00000002646	SNRPD1	100	100.000	ENSPTIG00000013206	SNRPD1	98	100.000	Panthera_tigris_altaica
ENSFALG00000002646	SNRPD1	100	100.000	ENSPTRG00000009909	SNRPD1	94	100.000	Pan_troglodytes
ENSFALG00000002646	SNRPD1	85	93.684	ENSPTRG00000050159	-	81	93.684	Pan_troglodytes
ENSFALG00000002646	SNRPD1	100	100.000	ENSPANG00000023478	SNRPD1	94	100.000	Papio_anubis
ENSFALG00000002646	SNRPD1	100	97.321	ENSPKIG00000003985	SNRPD1	94	97.321	Paramormyrops_kingsleyae
ENSFALG00000002646	SNRPD1	94	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSFALG00000002646	SNRPD1	100	96.429	ENSPMGG00000001862	snrpd1	94	96.429	Periophthalmus_magnuspinnatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSPEMG00000014773	-	94	100.000	Peromyscus_maniculatus_bairdii
ENSFALG00000002646	SNRPD1	85	82.474	ENSPMAG00000003938	-	80	82.474	Petromyzon_marinus
ENSFALG00000002646	SNRPD1	100	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSFALG00000002646	SNRPD1	79	95.506	ENSPFOG00000012448	SNRPD1	79	95.506	Poecilia_formosa
ENSFALG00000002646	SNRPD1	79	95.506	ENSPLAG00000006738	snrpd1	79	95.506	Poecilia_latipinna
ENSFALG00000002646	SNRPD1	79	95.506	ENSPMEG00000021942	snrpd1	79	95.506	Poecilia_mexicana
ENSFALG00000002646	SNRPD1	100	96.429	ENSPREG00000007094	snrpd1	94	96.429	Poecilia_reticulata
ENSFALG00000002646	SNRPD1	100	100.000	ENSPPYG00000025874	SNRPD1	94	100.000	Pongo_abelii
ENSFALG00000002646	SNRPD1	100	100.000	ENSPCOG00000013327	SNRPD1	94	100.000	Propithecus_coquereli
ENSFALG00000002646	SNRPD1	100	100.000	ENSPVAG00000005511	SNRPD1	75	100.000	Pteropus_vampyrus
ENSFALG00000002646	SNRPD1	100	96.429	ENSPNAG00000017824	snrpd1	94	96.429	Pygocentrus_nattereri
ENSFALG00000002646	SNRPD1	100	100.000	ENSRNOG00000013714	Snrpd1	94	100.000	Rattus_norvegicus
ENSFALG00000002646	SNRPD1	100	100.000	ENSRBIG00000022996	SNRPD1	94	100.000	Rhinopithecus_bieti
ENSFALG00000002646	SNRPD1	100	100.000	ENSRROG00000027640	SNRPD1	94	100.000	Rhinopithecus_roxellana
ENSFALG00000002646	SNRPD1	100	100.000	ENSSBOG00000020998	SNRPD1	94	100.000	Saimiri_boliviensis_boliviensis
ENSFALG00000002646	SNRPD1	100	100.000	ENSSHAG00000011791	SNRPD1	94	100.000	Sarcophilus_harrisii
ENSFALG00000002646	SNRPD1	94	95.238	ENSSFOG00015008809	-	88	95.238	Scleropages_formosus
ENSFALG00000002646	SNRPD1	94	95.238	ENSSFOG00015022253	-	88	95.238	Scleropages_formosus
ENSFALG00000002646	SNRPD1	94	95.238	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSFALG00000002646	SNRPD1	100	96.429	ENSSDUG00000010521	snrpd1	95	96.429	Seriola_dumerili
ENSFALG00000002646	SNRPD1	100	96.429	ENSSLDG00000011858	snrpd1	94	96.429	Seriola_lalandi_dorsalis
ENSFALG00000002646	SNRPD1	58	100.000	ENSSARG00000004271	SNRPD1	97	100.000	Sorex_araneus
ENSFALG00000002646	SNRPD1	100	100.000	ENSSPUG00000002824	SNRPD1	94	100.000	Sphenodon_punctatus
ENSFALG00000002646	SNRPD1	100	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSFALG00000002646	SNRPD1	100	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSFALG00000002646	SNRPD1	100	100.000	ENSTGUG00000005095	SNRPD1	94	100.000	Taeniopygia_guttata
ENSFALG00000002646	SNRPD1	100	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSFALG00000002646	SNRPD1	86	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSFALG00000002646	SNRPD1	79	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSFALG00000002646	SNRPD1	100	100.000	ENSTTRG00000002654	SNRPD1	97	100.000	Tursiops_truncatus
ENSFALG00000002646	SNRPD1	100	100.000	ENSUAMG00000013431	SNRPD1	96	100.000	Ursus_americanus
ENSFALG00000002646	SNRPD1	100	100.000	ENSUMAG00000019740	SNRPD1	94	100.000	Ursus_maritimus
ENSFALG00000002646	SNRPD1	100	100.000	ENSVPAG00000010056	SNRPD1	75	100.000	Vicugna_pacos
ENSFALG00000002646	SNRPD1	100	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSFALG00000002646	SNRPD1	100	98.214	ENSXETG00000027354	snrpd1	94	98.214	Xenopus_tropicalis
ENSFALG00000002646	SNRPD1	100	96.429	ENSXCOG00000020108	snrpd1	94	96.429	Xiphophorus_couchianus
ENSFALG00000002646	SNRPD1	100	96.429	ENSXMAG00000003368	snrpd1	94	96.429	Xiphophorus_maculatus