EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000002861 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 7501 bases
Position: chrJH603228.1:240821-248321
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002980	RRM_1	PF00076.22	3.4e-39	1	3
ENSFALP00000002980	RRM_1	PF00076.22	3.4e-39	2	3
ENSFALP00000002980	RRM_1	PF00076.22	3.4e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000002993	RBM47-201	1788	-	ENSFALP00000002980	595 (aa)	-	U3JJM6

Gene Model

Click here to download ENSFALG00000002861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000002861	RBM47	53	69.427	ENSFALG00000013157	RBM46	58	72.635
ENSFALG00000002861	RBM47	54	53.870	ENSFALG00000001096	HNRNPR	73	45.833
ENSFALG00000002861	RBM47	72	60.626	ENSFALG00000013183	A1CF	75	60.626
ENSFALG00000002861	RBM47	52	53.226	ENSFALG00000002895	SYNCRIP	79	44.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002861	RBM47	100	90.620	ENSG00000163694	RBM47	100	92.627	Homo_sapiens
ENSFALG00000002861	RBM47	100	78.130	ENSAPOG00000011062	rbm47	100	82.143	Acanthochromis_polyacanthus
ENSFALG00000002861	RBM47	100	89.816	ENSAMEG00000009672	RBM47	100	90.317	Ailuropoda_melanoleuca
ENSFALG00000002861	RBM47	100	78.667	ENSACIG00000011531	rbm47	100	78.667	Amphilophus_citrinellus
ENSFALG00000002861	RBM47	100	79.466	ENSAOCG00000022245	rbm47	100	82.143	Amphiprion_ocellaris
ENSFALG00000002861	RBM47	100	79.299	ENSAPEG00000018304	rbm47	100	82.143	Amphiprion_percula
ENSFALG00000002861	RBM47	100	78.431	ENSATEG00000018400	rbm47	100	77.451	Anabas_testudineus
ENSFALG00000002861	RBM47	100	95.134	ENSAPLG00000013974	RBM47	100	95.134	Anas_platyrhynchos
ENSFALG00000002861	RBM47	100	88.667	ENSACAG00000011833	RBM47	100	88.667	Anolis_carolinensis
ENSFALG00000002861	RBM47	100	91.122	ENSANAG00000029440	RBM47	100	89.950	Aotus_nancymaae
ENSFALG00000002861	RBM47	100	78.352	ENSACLG00000016902	rbm47	100	83.763	Astatotilapia_calliptera
ENSFALG00000002861	RBM47	96	79.275	ENSAMXG00000021794	rbm47	100	76.471	Astyanax_mexicanus
ENSFALG00000002861	RBM47	100	91.597	ENSBTAG00000002356	RBM47	100	91.261	Bos_taurus
ENSFALG00000002861	RBM47	100	90.803	ENSCJAG00000019385	RBM47	100	89.799	Callithrix_jacchus
ENSFALG00000002861	RBM47	96	89.529	ENSCAFG00000015898	RBM47	100	88.275	Canis_familiaris
ENSFALG00000002861	RBM47	83	91.260	ENSCAFG00020010558	RBM47	94	89.418	Canis_lupus_dingo
ENSFALG00000002861	RBM47	100	91.597	ENSCHIG00000026214	RBM47	100	91.261	Capra_hircus
ENSFALG00000002861	RBM47	86	87.611	ENSTSYG00000033612	RBM47	93	87.611	Carlito_syrichta
ENSFALG00000002861	RBM47	100	82.550	ENSCAPG00000008426	RBM47	100	82.718	Cavia_aperea
ENSFALG00000002861	RBM47	100	88.591	ENSCPOG00000014100	RBM47	100	90.957	Cavia_porcellus
ENSFALG00000002861	RBM47	99	61.873	ENSCCAG00000024397	-	99	61.383	Cebus_capucinus
ENSFALG00000002861	RBM47	100	90.970	ENSCCAG00000030129	-	100	90.134	Cebus_capucinus
ENSFALG00000002861	RBM47	100	90.620	ENSCATG00000042064	RBM47	100	90.117	Cercocebus_atys
ENSFALG00000002861	RBM47	100	88.926	ENSCLAG00000001684	RBM47	100	90.957	Chinchilla_lanigera
ENSFALG00000002861	RBM47	100	90.620	ENSCSAG00000017060	RBM47	100	90.117	Chlorocebus_sabaeus
ENSFALG00000002861	RBM47	88	85.426	ENSCHOG00000011731	RBM47	88	84.753	Choloepus_hoffmanni
ENSFALG00000002861	RBM47	100	93.980	ENSCPBG00000013831	RBM47	100	93.813	Chrysemys_picta_bellii
ENSFALG00000002861	RBM47	100	91.122	ENSCANG00000019997	RBM47	100	90.117	Colobus_angolensis_palliatus
ENSFALG00000002861	RBM47	100	87.625	ENSCGRG00001000623	-	100	87.458	Cricetulus_griseus_chok1gshd
ENSFALG00000002861	RBM47	100	61.678	ENSCGRG00001020102	-	100	65.210	Cricetulus_griseus_chok1gshd
ENSFALG00000002861	RBM47	100	86.789	ENSCGRG00000007762	-	100	86.709	Cricetulus_griseus_crigri
ENSFALG00000002861	RBM47	100	61.513	ENSCGRG00000014760	-	100	65.042	Cricetulus_griseus_crigri
ENSFALG00000002861	RBM47	100	76.333	ENSCSEG00000004545	rbm47	100	75.914	Cynoglossus_semilaevis
ENSFALG00000002861	RBM47	100	77.759	ENSCVAG00000020144	rbm47	100	82.653	Cyprinodon_variegatus
ENSFALG00000002861	RBM47	96	80.243	ENSDARG00000061985	rbm47	100	77.541	Danio_rerio
ENSFALG00000002861	RBM47	100	89.076	ENSDNOG00000046854	RBM47	100	89.580	Dasypus_novemcinctus
ENSFALG00000002861	RBM47	100	89.983	ENSDORG00000010144	Rbm47	100	89.816	Dipodomys_ordii
ENSFALG00000002861	RBM47	97	91.050	ENSETEG00000009194	RBM47	100	90.955	Echinops_telfairi
ENSFALG00000002861	RBM47	99	58.251	ENSEBUG00000011912	rbm47	91	61.664	Eptatretus_burgeri
ENSFALG00000002861	RBM47	100	90.924	ENSEASG00005008443	RBM47	100	90.924	Equus_asinus_asinus
ENSFALG00000002861	RBM47	100	90.924	ENSECAG00000004400	RBM47	100	90.924	Equus_caballus
ENSFALG00000002861	RBM47	75	90.909	ENSEEUG00000001194	RBM47	75	91.342	Erinaceus_europaeus
ENSFALG00000002861	RBM47	100	75.121	ENSELUG00000006148	rbm47	100	81.864	Esox_lucius
ENSFALG00000002861	RBM47	100	90.924	ENSFCAG00000012399	RBM47	100	90.588	Felis_catus
ENSFALG00000002861	RBM47	100	87.752	ENSFDAG00000016326	RBM47	100	87.248	Fukomys_damarensis
ENSFALG00000002861	RBM47	100	78.595	ENSFHEG00000007938	rbm47	100	77.592	Fundulus_heteroclitus
ENSFALG00000002861	RBM47	100	75.365	ENSGMOG00000014802	rbm47	100	75.365	Gadus_morhua
ENSFALG00000002861	RBM47	63	98.670	ENSGALG00000014267	RBM47	99	98.670	Gallus_gallus
ENSFALG00000002861	RBM47	63	84.043	ENSGAFG00000020571	rbm47	98	83.820	Gambusia_affinis
ENSFALG00000002861	RBM47	100	75.244	ENSGACG00000016223	rbm47	100	79.337	Gasterosteus_aculeatus
ENSFALG00000002861	RBM47	100	94.314	ENSGAGG00000020051	RBM47	100	94.147	Gopherus_agassizii
ENSFALG00000002861	RBM47	100	90.620	ENSGGOG00000001367	RBM47	100	90.117	Gorilla_gorilla
ENSFALG00000002861	RBM47	100	78.261	ENSHBUG00000003520	rbm47	100	83.763	Haplochromis_burtoni
ENSFALG00000002861	RBM47	85	79.528	ENSHGLG00000016914	RBM47	100	87.975	Heterocephalus_glaber_female
ENSFALG00000002861	RBM47	100	87.899	ENSHGLG00100014028	-	100	87.975	Heterocephalus_glaber_male
ENSFALG00000002861	RBM47	100	78.992	ENSHGLG00100003071	-	100	78.992	Heterocephalus_glaber_male
ENSFALG00000002861	RBM47	99	79.097	ENSHCOG00000002074	rbm47	99	81.378	Hippocampus_comes
ENSFALG00000002861	RBM47	100	79.431	ENSIPUG00000004743	rbm47	100	78.930	Ictalurus_punctatus
ENSFALG00000002861	RBM47	100	89.632	ENSSTOG00000004727	RBM47	100	90.134	Ictidomys_tridecemlineatus
ENSFALG00000002861	RBM47	100	88.815	ENSJJAG00000013823	Rbm47	100	87.833	Jaculus_jaculus
ENSFALG00000002861	RBM47	100	78.631	ENSKMAG00000000084	rbm47	100	80.867	Kryptolebias_marmoratus
ENSFALG00000002861	RBM47	100	78.500	ENSLBEG00000008436	rbm47	100	80.357	Labrus_bergylta
ENSFALG00000002861	RBM47	100	86.265	ENSLACG00000007196	RBM47	100	86.265	Latimeria_chalumnae
ENSFALG00000002861	RBM47	100	83.278	ENSLOCG00000012966	rbm47	95	81.773	Lepisosteus_oculatus
ENSFALG00000002861	RBM47	100	89.765	ENSLAFG00000011998	RBM47	100	89.933	Loxodonta_africana
ENSFALG00000002861	RBM47	100	90.620	ENSMFAG00000037967	RBM47	100	90.117	Macaca_fascicularis
ENSFALG00000002861	RBM47	100	90.620	ENSMMUG00000012036	RBM47	100	91.710	Macaca_mulatta
ENSFALG00000002861	RBM47	100	90.620	ENSMNEG00000040774	RBM47	100	90.117	Macaca_nemestrina
ENSFALG00000002861	RBM47	100	93.651	ENSMLEG00000041432	RBM47	100	93.651	Mandrillus_leucophaeus
ENSFALG00000002861	RBM47	100	78.013	ENSMAMG00000019143	rbm47	99	83.163	Mastacembelus_armatus
ENSFALG00000002861	RBM47	100	78.352	ENSMZEG00005023659	rbm47	99	83.763	Maylandia_zebra
ENSFALG00000002861	RBM47	100	97.993	ENSMGAG00000012226	RBM47	100	97.993	Meleagris_gallopavo
ENSFALG00000002861	RBM47	100	88.107	ENSMAUG00000006493	Rbm47	100	88.610	Mesocricetus_auratus
ENSFALG00000002861	RBM47	100	84.370	ENSMICG00000026417	RBM47	100	86.436	Microcebus_murinus
ENSFALG00000002861	RBM47	100	88.255	ENSMOCG00000021170	Rbm47	100	88.758	Microtus_ochrogaster
ENSFALG00000002861	RBM47	100	78.069	ENSMMOG00000007260	rbm47	100	76.759	Mola_mola
ENSFALG00000002861	RBM47	100	91.611	ENSMODG00000007003	RBM47	100	90.436	Monodelphis_domestica
ENSFALG00000002861	RBM47	52	81.646	ENSMODG00000015426	-	97	82.958	Monodelphis_domestica
ENSFALG00000002861	RBM47	100	81.008	ENSMODG00000020561	-	100	80.504	Monodelphis_domestica
ENSFALG00000002861	RBM47	100	77.667	ENSMALG00000005167	rbm47	100	82.051	Monopterus_albus
ENSFALG00000002861	RBM47	100	88.067	MGP_CAROLIEiJ_G0027258	Rbm47	100	88.235	Mus_caroli
ENSFALG00000002861	RBM47	100	88.403	ENSMUSG00000070780	Rbm47	100	88.571	Mus_musculus
ENSFALG00000002861	RBM47	100	88.403	MGP_PahariEiJ_G0017040	Rbm47	100	88.571	Mus_pahari
ENSFALG00000002861	RBM47	100	87.899	MGP_SPRETEiJ_G0028253	Rbm47	100	88.067	Mus_spretus
ENSFALG00000002861	RBM47	100	90.268	ENSMPUG00000006177	RBM47	94	90.436	Mustela_putorius_furo
ENSFALG00000002861	RBM47	100	88.591	ENSMLUG00000000889	RBM47	100	88.926	Myotis_lucifugus
ENSFALG00000002861	RBM47	100	88.945	ENSNGAG00000003325	Rbm47	100	89.280	Nannospalax_galili
ENSFALG00000002861	RBM47	100	78.268	ENSNBRG00000015092	rbm47	100	78.268	Neolamprologus_brichardi
ENSFALG00000002861	RBM47	100	90.285	ENSNLEG00000017151	RBM47	100	90.691	Nomascus_leucogenys
ENSFALG00000002861	RBM47	72	87.703	ENSMEUG00000009516	-	100	86.543	Notamacropus_eugenii
ENSFALG00000002861	RBM47	75	93.388	ENSOPRG00000016507	-	75	90.909	Ochotona_princeps
ENSFALG00000002861	RBM47	100	88.758	ENSODEG00000004873	RBM47	100	89.262	Octodon_degus
ENSFALG00000002861	RBM47	100	77.977	ENSONIG00000009061	rbm47	100	77.162	Oreochromis_niloticus
ENSFALG00000002861	RBM47	100	87.022	ENSOANG00000008978	RBM47	100	87.022	Ornithorhynchus_anatinus
ENSFALG00000002861	RBM47	100	90.940	ENSOCUG00000012034	RBM47	100	90.604	Oryctolagus_cuniculus
ENSFALG00000002861	RBM47	100	77.333	ENSORLG00000005847	rbm47	100	81.748	Oryzias_latipes
ENSFALG00000002861	RBM47	100	77.500	ENSORLG00020005154	rbm47	100	81.748	Oryzias_latipes_hni
ENSFALG00000002861	RBM47	100	77.833	ENSORLG00015000066	rbm47	100	82.005	Oryzias_latipes_hsok
ENSFALG00000002861	RBM47	100	78.667	ENSOMEG00000010730	rbm47	100	77.833	Oryzias_melastigma
ENSFALG00000002861	RBM47	100	82.185	ENSOGAG00000025193	-	100	82.353	Otolemur_garnettii
ENSFALG00000002861	RBM47	100	89.933	ENSOGAG00000029367	-	100	90.436	Otolemur_garnettii
ENSFALG00000002861	RBM47	100	83.025	ENSOARG00000012711	RBM47	100	83.139	Ovis_aries
ENSFALG00000002861	RBM47	100	90.452	ENSPPAG00000029763	RBM47	100	89.950	Pan_paniscus
ENSFALG00000002861	RBM47	100	87.731	ENSPPRG00000012873	RBM47	99	92.021	Panthera_pardus
ENSFALG00000002861	RBM47	85	87.945	ENSPTIG00000017046	RBM47	100	87.747	Panthera_tigris_altaica
ENSFALG00000002861	RBM47	100	90.620	ENSPTRG00000016006	RBM47	100	90.117	Pan_troglodytes
ENSFALG00000002861	RBM47	100	90.620	ENSPANG00000005980	RBM47	100	90.117	Papio_anubis
ENSFALG00000002861	RBM47	96	76.776	ENSPKIG00000005037	rbm47	100	74.465	Paramormyrops_kingsleyae
ENSFALG00000002861	RBM47	85	88.169	ENSPKIG00000013431	RBM47	98	82.946	Paramormyrops_kingsleyae
ENSFALG00000002861	RBM47	89	94.340	ENSPSIG00000017516	RBM47	97	94.151	Pelodiscus_sinensis
ENSFALG00000002861	RBM47	100	77.090	ENSPMGG00000018540	rbm47	100	76.000	Periophthalmus_magnuspinnatus
ENSFALG00000002861	RBM47	100	88.107	ENSPEMG00000011088	Rbm47	100	88.442	Peromyscus_maniculatus_bairdii
ENSFALG00000002861	RBM47	96	81.142	ENSPFOG00000007997	rbm47	100	77.073	Poecilia_formosa
ENSFALG00000002861	RBM47	96	81.282	ENSPLAG00000002072	rbm47	100	84.043	Poecilia_latipinna
ENSFALG00000002861	RBM47	100	79.967	ENSPMEG00000017492	rbm47	100	81.888	Poecilia_mexicana
ENSFALG00000002861	RBM47	96	81.629	ENSPREG00000008456	rbm47	100	84.043	Poecilia_reticulata
ENSFALG00000002861	RBM47	98	78.956	ENSPPYG00000014688	RBM47	100	77.946	Pongo_abelii
ENSFALG00000002861	RBM47	81	91.272	ENSPCAG00000011879	RBM47	81	91.771	Procavia_capensis
ENSFALG00000002861	RBM47	100	86.218	ENSPCOG00000023451	RBM47	100	87.059	Propithecus_coquereli
ENSFALG00000002861	RBM47	100	89.933	ENSPVAG00000003812	RBM47	100	90.436	Pteropus_vampyrus
ENSFALG00000002861	RBM47	100	77.850	ENSPNYG00000022868	rbm47	100	78.013	Pundamilia_nyererei
ENSFALG00000002861	RBM47	100	76.634	ENSPNAG00000007940	rbm47	100	77.451	Pygocentrus_nattereri
ENSFALG00000002861	RBM47	100	88.908	ENSRNOG00000002408	Rbm47	100	89.076	Rattus_norvegicus
ENSFALG00000002861	RBM47	100	91.122	ENSRBIG00000039601	RBM47	100	90.117	Rhinopithecus_bieti
ENSFALG00000002861	RBM47	100	91.122	ENSRROG00000044696	RBM47	100	90.117	Rhinopithecus_roxellana
ENSFALG00000002861	RBM47	100	87.563	ENSSBOG00000028475	RBM47	100	90.722	Saimiri_boliviensis_boliviensis
ENSFALG00000002861	RBM47	100	91.443	ENSSHAG00000017576	RBM47	100	90.604	Sarcophilus_harrisii
ENSFALG00000002861	RBM47	100	75.333	ENSSFOG00015024101	RBM47	100	74.667	Scleropages_formosus
ENSFALG00000002861	RBM47	100	74.300	ENSSFOG00015012445	rbm47	100	74.300	Scleropages_formosus
ENSFALG00000002861	RBM47	100	75.817	ENSSMAG00000009744	rbm47	100	80.513	Scophthalmus_maximus
ENSFALG00000002861	RBM47	100	79.599	ENSSDUG00000022684	rbm47	100	78.763	Seriola_dumerili
ENSFALG00000002861	RBM47	100	79.833	ENSSLDG00000003109	rbm47	100	81.566	Seriola_lalandi_dorsalis
ENSFALG00000002861	RBM47	84	90.828	ENSSARG00000001735	RBM47	75	91.051	Sorex_araneus
ENSFALG00000002861	RBM47	100	91.472	ENSSPUG00000007515	RBM47	100	93.351	Sphenodon_punctatus
ENSFALG00000002861	RBM47	100	80.500	ENSSPAG00000001257	rbm47	100	83.163	Stegastes_partitus
ENSFALG00000002861	RBM47	100	91.429	ENSSSCG00000008796	RBM47	100	91.092	Sus_scrofa
ENSFALG00000002861	RBM47	100	98.655	ENSTGUG00000008705	RBM47	100	98.655	Taeniopygia_guttata
ENSFALG00000002861	RBM47	100	77.258	ENSTRUG00000014050	rbm47	100	76.087	Takifugu_rubripes
ENSFALG00000002861	RBM47	100	76.923	ENSTNIG00000006127	rbm47	100	75.941	Tetraodon_nigroviridis
ENSFALG00000002861	RBM47	77	84.840	ENSTBEG00000001607	RBM47	76	85.638	Tupaia_belangeri
ENSFALG00000002861	RBM47	100	90.252	ENSTTRG00000002839	RBM47	100	90.420	Tursiops_truncatus
ENSFALG00000002861	RBM47	100	90.772	ENSUAMG00000021346	RBM47	100	90.604	Ursus_americanus
ENSFALG00000002861	RBM47	57	89.583	ENSVPAG00000000641	-	57	88.542	Vicugna_pacos
ENSFALG00000002861	RBM47	96	90.052	ENSVVUG00000014774	RBM47	100	88.610	Vulpes_vulpes
ENSFALG00000002861	RBM47	100	85.595	ENSXETG00000012802	rbm47	100	85.930	Xenopus_tropicalis
ENSFALG00000002861	RBM47	88	83.777	ENSXCOG00000000780	rbm47	100	83.777	Xiphophorus_couchianus
ENSFALG00000002861	RBM47	100	78.763	ENSXMAG00000009874	rbm47	100	81.378	Xiphophorus_maculatus